Bhi08G000288 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000288
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat
Location	chr8 : 12000537 .. 12003953 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGAATCGAACCTCGAACCTTGAGATCGATAATATGAACCTTTACAAAATATTGTCTATGATTAATAATGGTCAATTATAATAATGAAAGTGATAGTTTGAAAAACTAATTAGAACAAGTTTTCATGGATTTCCATACAATTTTCCAAATTTATCATCGCATCCATAATTTTATAAAATTGGGAGTGGGGAGTATTTGGTGATTTTGATTTTCCTGTTTTAAACCTATCGAATTTGGTCATTCTCTTCCCTCTCCGAGCGCCTTGTTTCACTTGTCTTCTTCTCTACCAAAAATTTGCATCAAATTGTCTGAAAATCTGTATTCATGTGTTATAATCTCTCTTCATTTCTCAAAGTTGAGTTCCATTGGACTCTGTATTGAGCTTGTTCTTGTGTTTGTTTTCAGTGATTTGTATAATATGAACCTCCTCCTTCGCATTCGGTTCTCAAGGAATTCCATTAACCAGCTCTGTAAATCCAACCCATCAAATCCACATTTCCTTTGTCTCAGAAGATTTTCAATTCATTCATGGTGGTTGAATGAATTGAATCATGGTAACATCACCCATTTTCTCCCTCCATCTCAAATCCGAAGCCATCCAGCTCCCAACCTCTTTTTTACGAAATTTTGTTTGAATTTCTACTCAAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCTAGTAAGAGGTTGAAATCCAGCATCAAACCTACACTGGACGATACCCAATTTCAATCGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTCTGTAATGTCATTTCTCTTCAGGGAGATCCTTTGGTGTGTTTTGAGCTCTTCAATTGGGCTTCACAGCAGCCTCGTTTCAGACATGATGTTTCCACTTATCTAATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTTCGGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATTAATATATTTAAGCATATGCAGAACAATAGAAACTTGAACTGTAGACCTTCAATTAGAACATATAATCTACTTTTTACCGCATTCTTGAGTCGAGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAATAGTATGATAAAGGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCATCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCGTATGACTATTTGATTCACGGGTTATGCGCTCAAGGGCGAACGGATAATGCAAGGGAGTTGTGCAATGAAATGAAGGAGAAGGGGTTTGTGCCTAGTGGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAATAGAAGATCTCCTGATTTTATTACATATAGGACGGTATTGGATGAACAGTGTAGACAAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGATGGCTGACCATGATTGAGCTGGAATCATGGACCATGTGGTCTTAGAAGGCAGGACTTACATGCGAAATTTGATATCAGGACCACAAAGCGTCTTTAGTCAGACCAAGCAGATAGAAAACCAATCTATTTCGATTTCTATCTTCCCAATTGTAGTTGTGTATCAATTGAAGGTTTAAGACTTACAGGTGCCATTTACTAAAAAGTTGAAAACCTATGATTTATCCAGATGCTTTGCTTCATATAGTTCTACATTAAGAAGACTACTGGAGAAGGAGAATCATCATTCAATTATGGCTACTCGGCTTATAGCTGGTGCATATCTTTTGTGGTTACAAACTTACACGGCTTATAAATGCTACAAATATTACTCAATTAGTGAGGTTAGCTTCTTGAGACTTTTTTAATAGTGCTTATATATGTTTTTCTTTTCAAGGACTTTAAAATTTTGAACAGTACTTGACGCACTATGACTTAGTTCTTTCACATTATAATAGGTGTATTCTTATGTGATAGAGACGTCTTTGTGGGAGTTGAATTGCAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTCTTGTCTCATCAAGTTCAAGGTACCTTTGCAAGCCGAGTTCATTTAACATTGATTTTTTTGCTTGAGGAACCAATAAAGAAAGTCATCCAAGTATAGGTTGTGTGAAAGATTACTCTCTGCACACTGACACATGGATTATCCCACATACCAGTCCAGCAGGATAGTGCTCGATTTGTAGCATTTTCCATGACAACTTAATTGGTTCAATCCTAACGCTAGGTTAAATTATAAATTTGGTCTCGATAGTTTGGAGAAAGTTAGAATTTACTCTCTATGATTTATAACTAGAATTGAATCTCTATGGTTTGATAAAATTTTCAAAGTCCCTACCATAGGAATTATTTATGAGGATTTTATCAAACGATATGAATCATCATGAGTTTTTATCAAATCATAAGGACTAAATTCTAATTATTAAAATTTTAGGGACTAAATTATAATCTTTTTCATATCACAAGGACCAAATTTACAATTTAACCTAGTATTTACTAATCTTGATCGTGCTACTGAACAGTTGTGAAGCATGATGTATTTTCATCTGCCAATCCCAAAACGGGCAAAGATGTAATAAACATAGGAAAAGTATAGAAATAAGAAAGCATTTATTAGAACTATATAATATCATAGGTGGAATTTTATTCGAAGACATTAAGAGCCCGTTTTGATTGACTTGAGAAAAAAGTGATTTTCAAAAAACTCATTTTTATTTAAATACTTTTGATAACAACTTAGTTGTCGAACATTCTAATTTTTTTTCAAAATGACTTGTTTTTTAAATTAAACATTTGAGAATGTATTCGAAACACACTCTAAATTATATCTATCCAATACCTTTGATTAAAAAAAAATCACAGAATCTTGAGGGTCATTTGGCTGGGATAAAATATTAGAGTAGATTATTGATCTTTACAAACAATTTTGAAAGATCTAACAATTTACGATTCTGCCATTCTTAAAACCTAAGGTGG

mRNA sequence

GGGGAATCGAACCTCGAACCTTGAGATCGATAATATGAACCTTTACAAAATATTGTCTATGATTAATAATGGTCAATTATAATAATGAAAGTGATAGTTTGAAAAACTAATTAGAACAAGTTTTCATGGATTTCCATACAATTTTCCAAATTTATCATCGCATCCATAATTTTATAAAATTGGGAGTGGGGAGTATTTGGTGATTTTGATTTTCCTGTTTTAAACCTATCGAATTTGGTCATTCTCTTCCCTCTCCGAGCGCCTTGTTTCACTTGTCTTCTTCTCTACCAAAAATTTGCATCAAATTGTCTGAAAATCTGTATTCATGTGTTATAATCTCTCTTCATTTCTCAAAGTTGAGTTCCATTGGACTCTGTATTGAGCTTGTTCTTGTGTTTGTTTTCAGTGATTTGTATAATATGAACCTCCTCCTTCGCATTCGGTTCTCAAGGAATTCCATTAACCAGCTCTGTAAATCCAACCCATCAAATCCACATTTCCTTTGTCTCAGAAGATTTTCAATTCATTCATGGTGGTTGAATGAATTGAATCATGGTAACATCACCCATTTTCTCCCTCCATCTCAAATCCGAAGCCATCCAGCTCCCAACCTCTTTTTTACGAAATTTTGTTTGAATTTCTACTCAAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCTAGTAAGAGGTTGAAATCCAGCATCAAACCTACACTGGACGATACCCAATTTCAATCGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTCTGTAATGTCATTTCTCTTCAGGGAGATCCTTTGGTGTGTTTTGAGCTCTTCAATTGGGCTTCACAGCAGCCTCGTTTCAGACATGATGTTTCCACTTATCTAATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTTCGGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATTAATATATTTAAGCATATGCAGAACAATAGAAACTTGAACTGTAGACCTTCAATTAGAACATATAATCTACTTTTTACCGCATTCTTGAGTCGAGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAATAGTATGATAAAGGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCATCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCGTATGACTATTTGATTCACGGGTTATGCGCTCAAGGGCGAACGGATAATGCAAGGGAGTTGTGCAATGAAATGAAGGAGAAGGGGTTTGTGCCTAGTGGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAATAGAAGATCTCCTGATTTTATTACATATAGGACGGTATTGGATGAACAGTGTAGACAAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGATGGCTGACCATGATTGAGCTGGAATCATGGACCATGTGGTCTTAGAAGGCAGGACTTACATGCGAAATTTGATATCAGGACCACAAAGCGTCTTTAGTCAGACCAAGCAGATAGAAAACCAATCTATTTCGATTTCTATCTTCCCAATTGTAGTTGTGTATCAATTGAAGGTTTAAGACTTACAGGTGCCATTTACTAAAAAGTTGAAAACCTATGATTTATCCAGATGCTTTGCTTCATATAGTTCTACATTAAGAAGACTACTGGAGAAGGAGAATCATCATTCAATTATGGCTACTCGGCTTATAGCTGGTGCATATCTTTTGTGGTTACAAACTTACACGGCTTATAAATGCTACAAATATTACTCAATTAGTGAGAGACGTCTTTGTGGGAGTTGAATTGCAAGATATCTTCTCCAAAAGAAGCTTGTGATCCCTTTATGCCTCTTGTCTCATCAAGTTCAAGGTACCTTTGCAAGCCGAGTTCATTTAACATTGATTTTTTTGCTTGAGGAACCAATAAAGAAAGTCATCCAAGTATAGGTTGTGTGAAAGATTACTCTCTGCACACTGACACATGGATTATCCCACATACCAGTCCAGCAGGATAGTGCTCGATTTGTAGCATTTTCCATGACAACTTAATTGGTTCAATCCTAACGCTAGGTTAAATTATAAATTTGGTCTCGATAGTTTGGAGAAAGTTAGAATTTACTCTCTATGATTTATAACTAGAATTGAATCTCTATGGTTTGATAAAATTTTCAAAGTCCCTACCATAGGAATTATTTATGAGGATTTTATCAAACGATATGAATCATCATGAGTTTTTATCAAATCATAAGGACTAAATTCTAATTATTAAAATTTTAGGGACTAAATTATAATCTTTTTCATATCACAAGGACCAAATTTACAATTTAACCTAGTATTTACTAATCTTGATCGTGCTACTGAACAGTTGTGAAGCATGATGTATTTTCATCTGCCAATCCCAAAACGGGCAAAGATGTAATAAACATAGGAAAAGTATAGAAATAAGAAAGCATTTATTAGAACTATATAATATCATAGGTGGAATTTTATTCGAAGACATTAAGAGCCCGTTTTGATTGACTTGAGAAAAAAGTGATTTTCAAAAAACTCATTTTTATTTAAATACTTTTGATAACAACTTAGTTGTCGAACATTCTAATTTTTTTTCAAAATGACTTGTTTTTTAAATTAAACATTTGAGAATGTATTCGAAACACACTCTAAATTATATCTATCCAATACCTTTGATTAAAAAAAAATCACAGAATCTTGAGGGTCATTTGGCTGGGATAAAATATTAGAGTAGATTATTGATCTTTACAAACAATTTTGAAAGATCTAACAATTTACGATTCTGCCATTCTTAAAACCTAAGGTGG

Coding sequence (CDS)

ATGAACCTCCTCCTTCGCATTCGGTTCTCAAGGAATTCCATTAACCAGCTCTGTAAATCCAACCCATCAAATCCACATTTCCTTTGTCTCAGAAGATTTTCAATTCATTCATGGTGGTTGAATGAATTGAATCATGGTAACATCACCCATTTTCTCCCTCCATCTCAAATCCGAAGCCATCCAGCTCCCAACCTCTTTTTTACGAAATTTTGTTTGAATTTCTACTCAAATAGGGCACCTTCAAGATCCTTCAGGAGGAGAGCTAGTAAGAGGTTGAAATCCAGCATCAAACCTACACTGGACGATACCCAATTTCAATCGGCAGTTTCTCAAATCCCTCCAAGGTTTACCTCCGAAGAACTCTGTAATGTCATTTCTCTTCAGGGAGATCCTTTGGTGTGTTTTGAGCTCTTCAATTGGGCTTCACAGCAGCCTCGTTTCAGACATGATGTTTCCACTTATCTAATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTATGAAGAAATGGATCATGTTGTGAATCAGGTGCTTTCGGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATCTATTTTTTCACTGAGGCAAGGAAGTTGACTAGAGCTATTAATATATTTAAGCATATGCAGAACAATAGAAACTTGAACTGTAGACCTTCAATTAGAACATATAATCTACTTTTTACCGCATTCTTGAGTCGAGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGTCTCTTCAGACAGATGGTGAATGATGATGGGATTGAACCTGACATATTTACTTTGAATAGTATGATAAAGGGGTATGTGCTTTCCCTGCATATTAATGATGCTCTTAGGATCTTTCATCAAATGGGTGTTGTGTATAGCTGCTTACCAAATTCATTTTCGTATGACTATTTGATTCACGGGTTATGCGCTCAAGGGCGAACGGATAATGCAAGGGAGTTGTGCAATGAAATGAAGGAGAAGGGGTTTGTGCCTAGTGGTATATCATATAATTCAATTGTGAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGATAATAGAAGATCTCCTGATTTTATTACATATAGGACGGTATTGGATGAACAGTGTAGACAAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAATTGCAAGAGAAGGATCTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGATTATGGAAATCTAAATTGA

Protein sequence

MNLLLRIRFSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIRSHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFVPSGISYNSIVNAMALNGEVEEAVNYLWEMIDNRRSPDFITYRTVLDEQCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGNLN

Homology

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BLAST of Bhi08G000288 vs. Swiss-Prot
Match: sp|Q9ZUY1|PP173_ARATH (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-100
Identity = 174/261 (66.67%), Postives = 212/261 (81.23%), Query Frame = 0


Query: 75  YSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTSEELCNVISLQGDPLVC 134
           YS   P+RS RRR S R KSS KP L+ ++F   +S++PPRFT EEL + I+L+ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 135 FELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIY 194
           F LFNWASQQPRF H+  +Y I I+KLG AKMY+EMD +VNQVLSV  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 195 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 254
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 255 FRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGL 314
           FRQMV D GIEPD+F LN ++KGYVLSLH+NDALRIFHQM VVY C PNSF+YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 315 CAQGRTDNARELCNEMKEKGF 336
           CAQGRT NAREL +EMK KGF
Sbjct: 336 CAQGRTINARELLSEMKGKGF 355

[Close]

BLAST of Bhi08G000288 vs. Swiss-Prot
Match: sp|Q9LSF5|PP254_ARATH (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.7e-20
Identity = 54/190 (28.42%), Postives = 103/190 (54.21%), Query Frame = 0


Query: 102 DTQFQSAVSQIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKL 161
           +TQF++ +  + P FT+ ++   +  Q DP +  ++F W +QQ  ++H+   Y   IK+ 
Sbjct: 59  ETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQA 118

Query: 162 GEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNC 221
              K    ++ ++ +V++     S  LYN +I F    + L  RA +++  M   R+ + 
Sbjct: 119 ITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDS 178

Query: 222 RPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVL 281
           +P + TY LL ++ L R     + ++Y+  +R L +QM   +G+ PD F LN +IK Y  
Sbjct: 179 KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAK 238

Query: 282 SLHINDALRI 291
            L +++A+R+
Sbjct: 239 CLEVDEAIRV 245

[Close]

BLAST of Bhi08G000288 vs. Swiss-Prot
Match: sp|Q9LW84|PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX=3702 GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.5e-13
Identity = 41/173 (23.70%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 123 NVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPS 182
           +++ +  +  V  + F WA ++  F+HD STY+  I+ L EA++Y EM   + +V+    
Sbjct: 98  SILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTY 157

Query: 183 IG-SETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNA 242
           +  S  + + ++     A+ +++A+++F   +  +   C+P+  TYN +    +  G++ 
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHE 217

Query: 243 YINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQM 295
            ++ +Y E        M N+    PD  T +++I  Y      + A+R+F +M
Sbjct: 218 KVHEVYTE--------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259

[Close]

BLAST of Bhi08G000288 vs. Swiss-Prot
Match: sp|Q9LK57|PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g13160 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.8e-09
Identity = 40/171 (23.39%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 107 SAVSQIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKM 166
           +A +  PP+     L  +++ + DP    E F  A Q   FR +++ Y  T+++L  AK 
Sbjct: 30  AAATPSPPK---PSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKK 89

Query: 167 YEEMDHVVNQVLSVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRT 226
           +E ++ ++ +    P++  E     +I  +        A  +F  M      NC+ +  +
Sbjct: 90  FEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPER---NCKRTALS 149

Query: 227 YNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKG 278
           +N L         NA +N    + +  +F+++     IEPD+ + N++IKG
Sbjct: 150 FNALL--------NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKG 186

[Close]

BLAST of Bhi08G000288 vs. Swiss-Prot
Match: sp|Q9MAG8|PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.7e-09
Identity = 51/184 (27.72%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 117 TSEELCNVISLQGDPLVCFELF---NWASQQPR--FRHDVSTYLITIKKLGEAKMYEEMD 176
           +S  L +++  + DP    +LF   +  S  P+  FR+ +  Y I I KLG +KM++E+D
Sbjct: 8   SSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELD 67

Query: 177 HVVNQV-LSVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLL 236
            V+  +      + +E ++  +I FF   +  +RA+++F  M   R   C+ ++++ N L
Sbjct: 68  QVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYR---CQRTVKSLNSL 127

Query: 237 FTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRI 295
            +A L  G          E  +   R    D+  +PD  T N +I G   S   +DAL++
Sbjct: 128 LSALLKCG----------ELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKL 178

[Close]

BLAST of Bhi08G000288 vs. TAIR10
Match: AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 368.2 bits (944), Expect = 6.7e-102
Identity = 174/261 (66.67%), Postives = 212/261 (81.23%), Query Frame = 0


Query: 75  YSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTSEELCNVISLQGDPLVC 134
           YS   P+RS RRR S R KSS KP L+ ++F   +S++PPRFT EEL + I+L+ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 135 FELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIY 194
           F LFNWASQQPRF H+  +Y I I+KLG AKMY+EMD +VNQVLSV  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 195 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 254
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 255 FRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGL 314
           FRQMV D GIEPD+F LN ++KGYVLSLH+NDALRIFHQM VVY C PNSF+YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335

Query: 315 CAQGRTDNARELCNEMKEKGF 336
           CAQGRT NAREL +EMK KGF
Sbjct: 336 CAQGRTINARELLSEMKGKGF 355

[Close]

BLAST of Bhi08G000288 vs. TAIR10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-56
Identity = 115/249 (46.18%), Postives = 153/249 (61.45%), Query Frame = 0


Query: 75  YSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTSEELCNVISLQGDPLVC 134
           YS   P+RS RRR S R KSS KP L++++FQ  +S++PPRFT EEL + I+L+ DP +C
Sbjct: 89  YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148

Query: 135 FELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIY 194
           F LFNWASQQPRF H+  +Y I I+KLG AK                             
Sbjct: 149 FHLFNWASQQPRFTHENCSYHIAIRKLGAAK----------------------------- 208

Query: 195 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 254
               + KL RA+NIF+HM N+RNL CRP++RTY++LF A L RG N++INH+YMET+R L
Sbjct: 209 ----SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 268

Query: 255 FRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVYSCLPNSFSYDYLIHGL 314
           FRQMV D GIEPD+F LN ++KG   +++  + L      G V    PN  SY+ L++  
Sbjct: 269 FRQMV-DSGIEPDVFALNCLVKG--RTINTRELLSEMKGKGFV----PNGKSYNSLVNAF 297

Query: 315 CAQGRTDNA 324
              G  D+A
Sbjct: 329 ALSGEIDDA 297

[Close]

BLAST of Bhi08G000288 vs. TAIR10
Match: AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-21
Identity = 54/190 (28.42%), Postives = 103/190 (54.21%), Query Frame = 0


Query: 102 DTQFQSAVSQIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKL 161
           +TQF++ +  + P FT+ ++   +  Q DP +  ++F W +QQ  ++H+   Y   IK+ 
Sbjct: 59  ETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQA 118

Query: 162 GEAKMYEEMDHVVNQVLSVPSIGSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNC 221
              K    ++ ++ +V++     S  LYN +I F    + L  RA +++  M   R+ + 
Sbjct: 119 ITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDS 178

Query: 222 RPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVL 281
           +P + TY LL ++ L R     + ++Y+  +R L +QM   +G+ PD F LN +IK Y  
Sbjct: 179 KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAK 238

Query: 282 SLHINDALRI 291
            L +++A+R+
Sbjct: 239 CLEVDEAIRV 245

[Close]

BLAST of Bhi08G000288 vs. TAIR10
Match: AT3G16010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 5.2e-14
Identity = 41/173 (23.70%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 123 NVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVLSVPS 182
           +++ +  +  V  + F WA ++  F+HD STY+  I+ L EA++Y EM   + +V+    
Sbjct: 98  SILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTY 157

Query: 183 IG-SETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNA 242
           +  S  + + ++     A+ +++A+++F   +  +   C+P+  TYN +    +  G++ 
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHE 217

Query: 243 YINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQM 295
            ++ +Y E        M N+    PD  T +++I  Y      + A+R+F +M
Sbjct: 218 KVHEVYTE--------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259

[Close]

BLAST of Bhi08G000288 vs. TAIR10
Match: AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-10
Identity = 40/171 (23.39%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 107 SAVSQIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKM 166
           +A +  PP+     L  +++ + DP    E F  A Q   FR +++ Y  T+++L  AK 
Sbjct: 30  AAATPSPPK---PSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKK 89

Query: 167 YEEMDHVVNQVLSVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRT 226
           +E ++ ++ +    P++  E     +I  +        A  +F  M      NC+ +  +
Sbjct: 90  FEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPER---NCKRTALS 149

Query: 227 YNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKG 278
           +N L         NA +N    + +  +F+++     IEPD+ + N++IKG
Sbjct: 150 FNALL--------NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKG 186

[Close]

BLAST of Bhi08G000288 vs. TrEMBL
Match: tr|A0A0A0LS50|A0A0A0LS50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 2.0e-172
Identity = 376/428 (87.85%), Postives = 394/428 (92.06%), Query Frame = 0


Query: 1   MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
           MNLLLRIR  FS NSI+ L  SNPS PHF+C RRFSIHSWWLN  +H N+ HFL  SQI 
Sbjct: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60

Query: 61  SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
            +  PNL FT F L FYS  APSRSFR+RA+KRLKSS+KP LD+TQFQ AVS+IPPRFTS
Sbjct: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120

Query: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
           EELCNVISLQ DPLVCFELFNWASQQPRFRHD S+Y ITIKKLGEAKMYEEMDHVVNQ L
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           +V SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
           RN YINHMYMETIRCLFRQMVNDDGIEPDIF+LN MIKGYVLSLH+NDALRIFHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           SCLPNS+S+DYLIHGLCAQ RTDNA+ELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 427
           EDDYGNLN
Sbjct: 421 EDDYGNLN 428

[Close]

BLAST of Bhi08G000288 vs. TrEMBL
Match: tr|A0A1S3CJQ6|A0A1S3CJQ6_CUCME (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501729 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 2.2e-171
Identity = 378/428 (88.32%), Postives = 395/428 (92.29%), Query Frame = 0


Query: 1   MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
           MN L RIR  FS NSIN L  SNPS PHF+C RRFSIHS  LN  +H N+THFL  SQI+
Sbjct: 1   MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60

Query: 61  SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
           ++PAPNL FTKFCLNFYS  APSRSFRRRA+KRLK+S+KPTLD+ QFQ AVS+IPPRFT 
Sbjct: 61  TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120

Query: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
           EEL NVISLQ DPLVCFELFNWASQQPRF+HDVS+Y ITIKKLGEAKMYEEMDHVVNQ L
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           +V SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
           RN YINH+YMETIRCLFRQMVNDDGIEPDIF LN MIKGYVLSLH+NDALRIFHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           SCLPNS+SYDYLIHGL AQ RTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 427
           EDDYGNLN
Sbjct: 421 EDDYGNLN 428

[Close]

BLAST of Bhi08G000288 vs. TrEMBL
Match: tr|A0A2N9FRL4|A0A2N9FRL4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17745 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.1e-126
Identity = 302/374 (80.75%), Postives = 335/374 (89.57%), Query Frame = 0


Query: 55  SQIRSHPAPNLFFTK-FCL---NFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVS 114
           +Q +  P P L   +  CL   + YS +APSRSFRRR SKR K + KP L++ QFQ AVS
Sbjct: 5   NQTQVAPRPQLLSNEILCLSLNSLYSTKAPSRSFRRRESKRSKLNAKPRLNEAQFQRAVS 64

Query: 115 QIPPRFTSEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEM 174
           Q+ PRFT+EELCNVI+LQ DP+VCFELFNWASQQ RFRHDV TY ITIKKLG AKMYEEM
Sbjct: 65  QLTPRFTAEELCNVITLQEDPIVCFELFNWASQQHRFRHDVCTYHITIKKLGAAKMYEEM 124

Query: 175 DHVVNQVLSVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLL 234
           D+VVNQVL+VP IGSE LYNT+IYF TEARKLTRA+N+FKHM+N+RNL+CRPSIRTYNLL
Sbjct: 125 DNVVNQVLAVPYIGSEALYNTVIYFSTEARKLTRAVNVFKHMRNSRNLDCRPSIRTYNLL 184

Query: 235 FTAFLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRI 294
           F AFLSRG N+YINHMYMETIRCLFRQMVN DGI+PDIF+LNSMIKGYVLSLH+NDALR+
Sbjct: 185 FAAFLSRGNNSYINHMYMETIRCLFRQMVN-DGIQPDIFSLNSMIKGYVLSLHVNDALRV 244

Query: 295 FHQMGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXX 354
           FHQM VVY CLPNSFSYDYLIHGLCAQGRT+NA+ELC++MK+KGFXXXXXXXXXXXXXXX
Sbjct: 245 FHQMDVVYKCLPNSFSYDYLIHGLCAQGRTNNAKELCDQMKQKGFXXXXXXXXXXXXXXX 304

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHT 414
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   D+VDGHT
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIVDGHT 364

Query: 415 YRKLLYVLEDDYGN 425
           Y+KLLYVLEDD+GN
Sbjct: 365 YKKLLYVLEDDFGN 377

[Close]

BLAST of Bhi08G000288 vs. TrEMBL
Match: tr|A0A061GUJ4|A0A061GUJ4_THECC (Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_041079 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.8e-126
Identity = 300/367 (81.74%), Postives = 331/367 (90.19%), Query Frame = 0


Query: 62  APNLFFTKFCLN----FYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFT 121
           +P      FC N    FYS RAPSRSFRRR +KRLK+S KP LD  +F+ AVSQ+ PRFT
Sbjct: 64  SPTANLHPFCYNSFTCFYSTRAPSRSFRRRINKRLKASSKPVLDQPKFEKAVSQLLPRFT 123

Query: 122 SEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQV 181
           +EELCNVI+L+ DPLVC+ELFNWA QQPRFRHDVSTY ITIKKLG AKMYEEMD VVNQV
Sbjct: 124 AEELCNVITLEEDPLVCWELFNWAVQQPRFRHDVSTYHITIKKLGVAKMYEEMDVVVNQV 183

Query: 182 LSVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSR 241
           L++ + GSE LYNT+IYFFTEARKLTRA+NIFKHM+NNR L+CRPSIRTYN+LFTA LSR
Sbjct: 184 LALRTFGSEPLYNTIIYFFTEARKLTRAVNIFKHMRNNRKLDCRPSIRTYNILFTAMLSR 243

Query: 242 GRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVV 301
           GR++YINHMYMETIRCLFRQMVN DGIEPD+F+LNSMIKGYVLSLH+NDALR+FHQMGVV
Sbjct: 244 GRDSYINHMYMETIRCLFRQMVN-DGIEPDVFSLNSMIKGYVLSLHVNDALRVFHQMGVV 303

Query: 302 YSCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXX 361
           Y CLPNS+SYD+LI+GLCAQGRT+NARELCNEMK+ GFXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 304 YKCLPNSYSYDFLIYGLCAQGRTNNARELCNEMKKNGFXXXXXXXXXXXXXXXXXXXXXX 363

Query: 362 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYV 421
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DLVDGHTYRKLLY 
Sbjct: 364 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVDGHTYRKLLYA 423

Query: 422 LEDDYGN 425
           +EDD+GN
Sbjct: 424 MEDDFGN 429

[Close]

BLAST of Bhi08G000288 vs. TrEMBL
Match: tr|A0A0D2RRL4|A0A0D2RRL4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G012900 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.1e-125
Identity = 296/371 (79.78%), Postives = 330/371 (88.95%), Query Frame = 0


Query: 54  PSQIRSHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIP 113
           PS I S   P     +F   FYS +APSRS+RRR +KRLK+S KP LD  +FQ  +SQ+P
Sbjct: 53  PSSITS---PTSISHQFYTYFYSTKAPSRSYRRRVNKRLKASQKPVLDQAKFQQVISQLP 112

Query: 114 PRFTSEELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHV 173
           PRFT++EL NVI+L+ DPLVC+ELFNWA+QQPRF+H+VSTY ITIKKLG AKMYEEMD V
Sbjct: 113 PRFTADELYNVITLEDDPLVCWELFNWAAQQPRFKHNVSTYHITIKKLGVAKMYEEMDVV 172

Query: 174 VNQVLSVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTA 233
           VNQVL++ S GSE LYNTMIYFF EARKLTRA+NIFKHM+NNR  +CRPSIRTYN+LFTA
Sbjct: 173 VNQVLALRSFGSEPLYNTMIYFFAEARKLTRAVNIFKHMRNNRKFDCRPSIRTYNILFTA 232

Query: 234 FLSRGRNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQ 293
            LSRG+++YINHMYMETIRCLFRQMV DDGIEPD+FTLNSMIKGYVLSLH+NDALR+FHQ
Sbjct: 233 MLSRGKDSYINHMYMETIRCLFRQMV-DDGIEPDVFTLNSMIKGYVLSLHVNDALRVFHQ 292

Query: 294 MGVVYSCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXX 353
           MGVVY CLPN+FSYDYLI+GLCAQGRT+NARELC+EMK  GF XXXXXXXXXXXXXXXXX
Sbjct: 293 MGVVYKCLPNAFSYDYLIYGLCAQGRTNNARELCDEMKRNGFTXXXXXXXXXXXXXXXXX 352

Query: 354 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRK 413
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ KDLVDGHTYRK
Sbjct: 353 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKDLVDGHTYRK 412

Query: 414 LLYVLEDDYGN 425
           LLY +ED YG+
Sbjct: 413 LLYAMEDSYGD 419

[Close]

BLAST of Bhi08G000288 vs. NCBI nr
Match: XP_004147297.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis sativus] >KGN64750.1 hypothetical protein Csa_1G086930 [Cucumis sativus])

HSP 1 Score: 614.4 bits (1583), Expect = 2.9e-172
Identity = 376/428 (87.85%), Postives = 394/428 (92.06%), Query Frame = 0


Query: 1   MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
           MNLLLRIR  FS NSI+ L  SNPS PHF+C RRFSIHSWWLN  +H N+ HFL  SQI 
Sbjct: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60

Query: 61  SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
            +  PNL FT F L FYS  APSRSFR+RA+KRLKSS+KP LD+TQFQ AVS+IPPRFTS
Sbjct: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120

Query: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
           EELCNVISLQ DPLVCFELFNWASQQPRFRHD S+Y ITIKKLGEAKMYEEMDHVVNQ L
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           +V SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
           RN YINHMYMETIRCLFRQMVNDDGIEPDIF+LN MIKGYVLSLH+NDALRIFHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           SCLPNS+S+DYLIHGLCAQ RTDNA+ELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 427
           EDDYGNLN
Sbjct: 421 EDDYGNLN 428

[Close]

BLAST of Bhi08G000288 vs. NCBI nr
Match: XP_022965006.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 613.2 bits (1580), Expect = 6.6e-172
Identity = 382/428 (89.25%), Postives = 399/428 (93.22%), Query Frame = 0


Query: 1   MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
           MNLLLRIR  F RNSINQLC S PSNPHF+CLRRFS HSW+LN  +HGN +H L  SQI+
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLN-TDHGNFSHILRLSQIQ 60

Query: 61  SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
           ++PAP L FTKFCLNFYSN APSRSFRRRASKRLKS IKP L++ QFQ A+SQIPPRF S
Sbjct: 61  NYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNS 120

Query: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
           EEL NVIS+QGDPLVCFELFNWASQQ RFRHDVSTY ITIKKLGEAKMYEEMD+VVNQVL
Sbjct: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180

Query: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           +VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
           RNAYIN MYMETIRCLFRQMVN DGIEPDIFTLN MIKGYVLSLH+NDALRIFHQMGVVY
Sbjct: 241 RNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           S LPNSFSYDYLIHGLCAQ RTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEK+LVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 427
           EDDYGN+N
Sbjct: 421 EDDYGNVN 426

[Close]

BLAST of Bhi08G000288 vs. NCBI nr
Match: XP_022970418.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970419.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970420.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970421.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 612.5 bits (1578), Expect = 1.1e-171
Identity = 382/428 (89.25%), Postives = 399/428 (93.22%), Query Frame = 0


Query: 1   MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
           MNLLLRIR  F RNSINQLC S PSNP+F+CLRRFS HS  LN  +HGN +H L  SQI+
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLN-TDHGNFSHILRLSQIQ 60

Query: 61  SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
           ++PAP L FTKFCLNFYSNRAPSRSFRRRASKRLKS IKP L++ QFQ A+SQIPPRF S
Sbjct: 61  NYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNS 120

Query: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
           EEL NVIS+QGDPLVCFELFNWASQQ RFRHDVSTY ITIKKLGEAKMYEEMD+VVNQVL
Sbjct: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180

Query: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           +VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
           RNAYINHMYMETIRCLFRQMVN DGIEPDIFTLN MIKGYVLSLH+NDALR+FHQMGVVY
Sbjct: 241 RNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVY 300

Query: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           S LPNSFSYDYLIHGLCAQ RTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEK+LVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 427
           EDDYGN+N
Sbjct: 421 EDDYGNVN 426

[Close]

BLAST of Bhi08G000288 vs. NCBI nr
Match: XP_008463631.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463637.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463644.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo])

HSP 1 Score: 610.9 bits (1574), Expect = 3.3e-171
Identity = 378/428 (88.32%), Postives = 395/428 (92.29%), Query Frame = 0


Query: 1   MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
           MN L RIR  FS NSIN L  SNPS PHF+C RRFSIHS  LN  +H N+THFL  SQI+
Sbjct: 1   MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60

Query: 61  SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
           ++PAPNL FTKFCLNFYS  APSRSFRRRA+KRLK+S+KPTLD+ QFQ AVS+IPPRFT 
Sbjct: 61  TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120

Query: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
           EEL NVISLQ DPLVCFELFNWASQQPRF+HDVS+Y ITIKKLGEAKMYEEMDHVVNQ L
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           +V SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
           RN YINH+YMETIRCLFRQMVNDDGIEPDIF LN MIKGYVLSLH+NDALRIFHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           SCLPNS+SYDYLIHGL AQ RTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 427
           EDDYGNLN
Sbjct: 421 EDDYGNLN 428

[Close]

BLAST of Bhi08G000288 vs. NCBI nr
Match: XP_023519586.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519587.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519588.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609.8 bits (1571), Expect = 7.3e-171
Identity = 380/428 (88.79%), Postives = 398/428 (92.99%), Query Frame = 0


Query: 1   MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
           MNLLLRIR  F RNSINQLC S PSNPHF+CLRRFS HSW LN  +HGN +H    SQI+
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWLLN-TDHGNFSHIFRLSQIQ 60

Query: 61  SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
           ++PAP L FTKFCLNFYSNRAPSRSFRRRASKRLKS IKP L++ QFQ A+SQIPPRF S
Sbjct: 61  NYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNS 120

Query: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
           EEL NVIS+QGDPLVCFELFNWASQQ RFRHDVSTY ITIKKLGEAKMYEEMD+VVNQVL
Sbjct: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180

Query: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           +VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+N+NCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNVNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
           RNAYIN MYMETIRCLFRQMVN DGIEPDIFTLN MIKGYVLSLH+NDALRIFHQMGVVY
Sbjct: 241 RNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360
           S LPNSFSYDYLIHGLCAQ RTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKDLVDGHTYRKLLYVL 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEK+LVDGHTYRKLLYVL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEKELVDGHTYRKLLYVL 420

Query: 421 EDDYGNLN 427
           EDDYGN++
Sbjct: 421 EDDYGNVH 426

The following BLAST results are available for this feature:

BLAST of Bhi08G000288 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUY1\|PP173_ARATH	1.2e-100	66.67	Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop...	[more]
sp\|Q9LSF5\|PP254_ARATH	2.7e-20	28.42	Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop...	[more]
sp\|Q9LW84\|PP236_ARATH	9.5e-13	23.70	Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LK57\|PP226_ARATH	2.8e-09	23.39	Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop...	[more]
sp\|Q9MAG8\|PPR79_ARATH	3.7e-09	27.72	Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th...	[more]

BLAST of Bhi08G000288 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27800.1	6.7e-102	66.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27300.1	1.1e-56	46.18	pentatricopeptide (PPR) repeat-containing protein	[more]
AT3G25210.1	1.5e-21	28.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G16010.1	5.2e-14	23.70	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G13160.1	1.6e-10	23.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi08G000288 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LS50\|A0A0A0LS50_CUCSA	2.0e-172	87.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1	[more]
tr\|A0A1S3CJQ6\|A0A1S3CJQ6_CUCME	2.2e-171	88.32	pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc...	[more]
tr\|A0A2N9FRL4\|A0A2N9FRL4_FAGSY	2.1e-126	80.75	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17745 PE=4 SV=1	[more]
tr\|A0A061GUJ4\|A0A061GUJ4_THECC	2.8e-126	81.74	Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao O...	[more]
tr\|A0A0D2RRL4\|A0A0D2RRL4_GOSRA	3.1e-125	79.78	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G012900 PE=4 ...	[more]

BLAST of Bhi08G000288 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147297.1	2.9e-172	87.85	PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-...	[more]
XP_022965006.1	6.6e-172	89.25	pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur...	[more]
XP_022970418.1	1.1e-171	89.25	pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur...	[more]
XP_008463631.1	3.3e-171	88.32	PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-...	[more]
XP_023519586.1	7.3e-171	88.79	pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000288	Bhi08M000288	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 302..350 e-value: 2.8E-11 score: 43.3
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 371..399 e-value: 1.6E-5 score: 24.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 340..373 e-value: 4.3E-4 score: 18.3 coord: 269..303 e-value: 3.1E-4 score: 18.7 coord: 305..338 e-value: 1.8E-8 score: 32.0 coord: 375..405 e-value: 0.0031 score: 15.6 coord: 188..215 e-value: 0.0023 score: 16.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 189..234 e-value: 1.9E-4 score: 21.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 269..294 e-value: 0.0086 score: 16.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 303..337 score: 12.715
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 338..372 score: 9.493
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 373..407 score: 9.306
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 150..180 score: 5.481
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 185..215 score: 7.783
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 223..257 score: 5.031
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 267..297 score: 7.53
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 87..246 e-value: 7.8E-19 score: 69.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 284..422 e-value: 2.1E-29 score: 105.1
None	No IPR available	PANTHER	PTHR24015:SF1017	PENTATRICOPEPTIDE PPR REPEAT-CONTAINING PROTEIN	coord: 73..419
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 73..419

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000288	Csa1G086930	Cucumber (Chinese Long) v2	cuwgoB037
Bhi08G000288	MELO3C005032	Melon (DHL92) v3.5.1	mewgoB166
Bhi08G000288	ClCG03G002330	Watermelon (Charleston Gray)	wcgwgoB346
Bhi08G000288	CSPI01G12820	Wild cucumber (PI 183967)	cpiwgoB037
Bhi08G000288	Cucsa.207330	Cucumber (Gy14) v1	cgywgoB434
Bhi08G000288	CmaCh13G001920	Cucurbita maxima (Rimu)	cmawgoB0259
Bhi08G000288	CmoCh13G001930	Cucurbita moschata (Rifu)	cmowgoB0252
Bhi08G000288	Lsi02G014380	Bottle gourd (USVL1VR-Ls)	lsiwgoB246
Bhi08G000288	Cp4.1LG20g09070	Cucurbita pepo (Zucchini)	cpewgoB0657
Bhi08G000288	CsGy1G012900	Cucumber (Gy14) v2	cgybwgoB034
Bhi08G000288	MELO3C005032.2	Melon (DHL92) v3.6.1	medwgoB169
Bhi08G000288	Carg21068	Silver-seed gourd	carwgoB0857
Bhi08G000288	CsaV3_1G013010	Cucumber (Chinese Long) v3	cucwgoB040
Bhi08G000288	Cla005049	Watermelon (97103) v1	wgowmB477
Bhi08G000288	Cla97C03G053350	Watermelon (97103) v2	wgowmbB476

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000288	Cucurbita maxima (Rimu)	cmawgoB0595
Bhi08G000288	Cucurbita moschata (Rifu)	cmowgoB0592
Bhi08G000288	Cucurbita pepo (Zucchini)	cpewgoB0636
Bhi08G000288	Cucurbita pepo (Zucchini)	cpewgoB0699
Bhi08G000288	Bottle gourd (USVL1VR-Ls)	lsiwgoB093
Bhi08G000288	Melon (DHL92) v3.5.1	mewgoB145
Bhi08G000288	Watermelon (Charleston Gray)	wcgwgoB317
Bhi08G000288	Watermelon (97103) v2	wgowmbB469
Bhi08G000288	Watermelon (97103) v1	wgowmB522
Bhi08G000288	Silver-seed gourd	carwgoB0536
Bhi08G000288	Silver-seed gourd	carwgoB0860