Csa1G051700 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G051700
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTPD1
LocationChr1 : 6074767 .. 6076872 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTTGCTTTCGACGGCTCTTCTTTTCTTTTTTGACTCCTTGTGTTTTCAAATCCCATTTTTTCTCTCTGATGATGTGATGTTTTCATTCTTTTCCCAACGCAGGTTCTTTAGTTTCTGAAGTTTCTTCTCTCTTATCAAGGATCGGTTGCCTCTTCCGATTCCCATTTCTTTCCTTTCACTGTACAACAGTTCTTTCCGGAGTTTACAGGATTCTCTGTTATAAATGATGAAAGAACTGTCTACTACTACTACTACTACTACTACTCGGCGTGTATCGGTGATTTTCGCTTTGGTTTTATTCATCTTCTTTTTCGTATCTGCTATTCTTACAGGTCTGTATCATCTCTCGCTCTCCGTTCTTCGTTTTGTTTTCAATTTGTTTTTACTGTGTGTTTTGATTTGTTATACTTTTACGTCGCCTCTCTCTCTCTCTCTCTCTCTTTCTCTGTGGGTTTACCTTTTGTTTTGTCTTCTTCTTCCTGTATATTTTATTTGTTCCTCAATCATTGTTCTCTCCTTTGTCTTTTTCTGCTTCGTATAGAAACAAAGATATTATTCTTCTTCTACTACTTTTTTTCACATCATTTTCTTCCTTACATGATTGCAGATCCGAATATTATGGATTCCGGTCCACCAAGTTTTCTTCCGTTGGATTTGAATACCACAACAGTTGCTCCTCATCGGAAGCTTCTTCTCACTAGTAAGTTTACGAAAATCTGATTTAATCGCGTATTCATAAATGTTATACCAGCAGATTCGTTATTCGGAGGAATCGTTATTCTTTTCTGAGTTTGTCGTTGGTTTTTGTTTTAAATGTCTGTTTGATTTTGGAATTATGATCTTGGGGATGAGGGGAGGGATTGAAAGATTGGGTACTCAATTGCATATATAGTTGATTTGTTGTCAGAATTGCACGCCCATCCATTCTTAGTAATGAAGCTAAGGCGCACCTTTTTCTATGTAGCTTTCAACTCCTTCTTTCTGTTCTTTAACCTATATGGCCTTTCTGTAGCTGTTTTTGGAGAAATCTTCTTTATTTGATCCTATATACCCACCAGCATTTCTTCCTTTTTCTGTCCACAATTCATTGATTACATAAAAGCAACCTTTGGCCCGAAAGCGTGGAGCATTATAATGCCTTTTTCAGTTTTAGCTTTTGAGCTTCTAATTGAATTCATTGCTTTGACAAAAAAGCTCTACCAGTGTGTGTGTATTAAATTATATCAAACGATTAGCTAATGCGTGGACTCTCTTTAGTGGGATTGTTGAGGGTACAGTTTTATTAGTTTTAAACTTTCATATGATTTTTTTTTTAATTTTAAATTTTGTCATGCCTAACCAAATGGATTGAATTTAGATAATGGTGCCTTGGGATTTTTCTTTTTCATACTCTCTTTATCTTTACCTTCGCCTTTGAATTTGCTTTATCCTTTATAATTCATTATTAATGCTTTGAACACAACTTTTATGACTTTCAGAAAGTGTAGTTTGTGTGTCTGTAGTTGTTTTTCCATTGGGTGGGTCGATATTTATTTATAAGAGTAATGTTTGCACGTGGGTGGTGCCTTCAACAATGCCATAATATACGATGCCAACAAATGACGTCGACCTGTTTGCTTCTTTATTTGAATATGTGCTTTTTAGGGGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCAACTGGTATCCCCACCTACACCGTGGAAGTGGTGAACGCTTGTGTCACTGGATGTGAGATTTATGGTATTCATTTCAAATGCGGTTGGTTTAGCTCCGCTCACCTCATCAATCCTAGAGTCTTTAAGCGTCTACGTTATGACGACTGTCTCGTGAACGACGGCAAACCTCTTGTCTATGGCGGTACACTCTCATTTCAATATGCAAACACTTATCCTTACCCACTTTCAGTCTCCTCAGTTCTATGCATGTGAAATGACACACCCACCAGACCAATTAGGAGACGCTCATATGAAGCACTTGAAGCAGCAGCAGGTACTTTAGTCGATTACTGATTGACGATGGCCGCCCCCACCTGCCTTTTCTT

mRNA sequence

ATGATGAAAGAACTGTCTACTACTACTACTACTACTACTACTCGGCGTGTATCGGTGATTTTCGCTTTGGTTTTATTCATCTTCTTTTTCGTATCTGCTATTCTTACAGATCCGAATATTATGGATTCCGGTCCACCAAGTTTTCTTCCGTTGGATTTGAATACCACAACAGTTGCTCCTCATCGGAAGCTTCTTCTCACTAGGGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCAACTGGTATCCCCACCTACACCGTGGAAGTGGTGAACGCTTGTGTCACTGGATGTGAGATTTATGGTATTCATTTCAAATGCGGTTGGTTTAGCTCCGCTCACCTCATCAATCCTAGAGTCTTTAAGCGTCTACGTTATGACGACTGTCTCGTGAACGACGGCAAACCTCTTGTCTATGGCGGTACACTCTCATTTCAATATGCAAACACTTATCCTTACCCACTTTCAGTCTCCTCAGTTCTATGCATGTGA

Coding sequence (CDS)

ATGATGAAAGAACTGTCTACTACTACTACTACTACTACTACTCGGCGTGTATCGGTGATTTTCGCTTTGGTTTTATTCATCTTCTTTTTCGTATCTGCTATTCTTACAGATCCGAATATTATGGATTCCGGTCCACCAAGTTTTCTTCCGTTGGATTTGAATACCACAACAGTTGCTCCTCATCGGAAGCTTCTTCTCACTAGGGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCAACTGGTATCCCCACCTACACCGTGGAAGTGGTGAACGCTTGTGTCACTGGATGTGAGATTTATGGTATTCATTTCAAATGCGGTTGGTTTAGCTCCGCTCACCTCATCAATCCTAGAGTCTTTAAGCGTCTACGTTATGACGACTGTCTCGTGAACGACGGCAAACCTCTTGTCTATGGCGGTACACTCTCATTTCAATATGCAAACACTTATCCTTACCCACTTTCAGTCTCCTCAGTTCTATGCATGTGA

Protein sequence

MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLCM*
Homology
[Close]
BLAST of Csa1G051700 vs. Swiss-Prot
Match: TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 85/140 (60.71%), Postives = 97/140 (69.29%), Query Frame = 1 

Query: 51  LDLN-TTTVAP---HRKLLLTREATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTG 110
           LDL  TTT +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P G
Sbjct: 37  LDLTKTTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNG 96

Query: 111 IPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGT 170
           IP Y VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G T
Sbjct: 97  IPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGST 156

Query: 171 LSFQYANTYPYPLSVSSVLC 182
           LSF YANT+PY LSV+ V C
Sbjct: 157 LSFHYANTFPYHLSVAFVTC 175

[Close]
BLAST of Csa1G051700 vs. Swiss-Prot
Match: TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 1 

Query: 47  SFLPLDLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 106
           SF+ ++ N T ++  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YT
Sbjct: 48  SFVSINENRTALS--RKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYT 107

Query: 107 VEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 166
           VE+ N+CV+ C I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQY
Sbjct: 108 VEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQY 167

Query: 167 ANTYPYPLSVSSVLC 182
           AN++ YPLSV+SV C
Sbjct: 168 ANSFSYPLSVASVSC 178

[Close]
BLAST of Csa1G051700 vs. Swiss-Prot
Match: TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28
Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 1 

Query: 87  DIVINQGPTAPLPTGIPTYTVEVVNACVTG------CEIYGIHFKCGWFSSAHLINPRVF 146
           DI I QG   PLP+G+P YTV+V+N C  G      C I GIH +CGWFSS  L++PRVF
Sbjct: 119 DIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVF 178

Query: 147 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLCM 183
           +RL +DDCL+NDG+PL+ G T+SF+Y N++PY LSVS   C+
Sbjct: 179 RRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATCV 220

[Close]
BLAST of Csa1G051700 vs. Swiss-Prot
Match: TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.7e-22
Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 1 

Query: 13  TTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAPHRKLLLTREATI 72
           TT R++    ++L +     A++       SG  S   +   T  +    KLL   E   
Sbjct: 5   TTMRLASSVTIILLLLVASQALVV------SGESSSSAMQSKTLNM---NKLLNISEDHS 64

Query: 73  EEPTRIWGEK-----CTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCG 132
               R W ++     C++ ++V+ Q     LP+GIPTY+VE++N C T C +Y +H  CG
Sbjct: 65  PNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCG 124

Query: 133 WFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
            F+SA L++P  F+R+ ++DCLV  G  L     +SFQY+N++ YPL+V++V C
Sbjct: 125 EFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]
BLAST of Csa1G051700 vs. TrEMBL
Match: A0A0A0LUG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051700 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CM 183
           CM
Sbjct: 181 CM 182

[Close]
BLAST of Csa1G051700 vs. TrEMBL
Match: A0A067JIC3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26409 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.6e-55
Identity = 108/162 (66.67%), Postives = 124/162 (76.54%), Query Frame = 1 

Query: 22  ALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNT--TTVAPHRKLLLTREATIEEPTRIW 81
           A+VL +F F       P        S  P+   T  T  APHRKLL +R   +EEP RIW
Sbjct: 10  AVVLLLFLFTVLTFMPPFFTGGFMGSSHPISKGTSYTLSAPHRKLL-SRSLAMEEPNRIW 69

Query: 82  GEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRV 141
           GEKCTK+DIVINQGPTAPLP+GIPTYTVE++N CVTGC+I GIH  CGWFSSA LINP++
Sbjct: 70  GEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKI 129

Query: 142 FKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           FKRLRY+DCLVNDGKPLV GGTLSF+YANT+ YPLSVSSV+C
Sbjct: 130 FKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVIC 170

[Close]
BLAST of Csa1G051700 vs. TrEMBL
Match: A0A061FZR9_THECC (Tapetum determinant 1 OS=Theobroma cacao GN=TCM_014700 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.7e-53
Identity = 107/161 (66.46%), Postives = 121/161 (75.16%), Query Frame = 1 

Query: 24  VLFIFFFVSAILTDPNIMDSGPPSFLPLDL---NTTTVAPHRKLLLTREATIEEPTRIWG 83
           VLF+F          NI  S     L L +   + T   PHRKLL  R   +EEP RIWG
Sbjct: 16  VLFLFLVALFSGQGKNISSSFGLKLLRLRIKQWDNTLSTPHRKLL--RGMAVEEPNRIWG 75

Query: 84  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVF 143
           EKCTK+DIVINQGPTAPLP+GIPTYTVE+VN CVTGC+I GIH  CGWFSSA LINP++F
Sbjct: 76  EKCTKADIVINQGPTAPLPSGIPTYTVEIVNVCVTGCDISGIHLNCGWFSSARLINPKIF 135

Query: 144 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           KR+RY+DCLVNDGKPLV GGTLSFQYANT+ YPLSVS V+C
Sbjct: 136 KRIRYNDCLVNDGKPLVNGGTLSFQYANTFLYPLSVSRVVC 174

[Close]
BLAST of Csa1G051700 vs. TrEMBL
Match: K4BJH0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-52
Identity = 104/168 (61.90%), Postives = 122/168 (72.62%), Query Frame = 1 

Query: 17  VSVIFALVLFIFF---FVSAILTDPNIMDSGPPSFLPLDLNTTTVAPHRKLLLTREATIE 76
           +SV+FA  L       F + IL  PN M     +        T V PHRKLL   +    
Sbjct: 15  ISVVFAFFLLFIIGPEFFTGILIGPNFMADANSAIT----GNTNVGPHRKLL--NQGNEV 74

Query: 77  EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAH 136
           E TRIWG+KC+KSDIVINQGPTAPLP+GIPTYTVE++N CV+GC+I GIH  CGWFSSA 
Sbjct: 75  ETTRIWGDKCSKSDIVINQGPTAPLPSGIPTYTVEIMNVCVSGCDISGIHLSCGWFSSAR 134

Query: 137 LINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           LINPR+FKRL +DDCLVNDGKPL+ G T+SFQYANT+ YPLSVSSV+C
Sbjct: 135 LINPRIFKRLHFDDCLVNDGKPLINGHTISFQYANTFRYPLSVSSVVC 176

[Close]
BLAST of Csa1G051700 vs. TrEMBL
Match: A0A0D2T9S2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G208800 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.8e-51
Identity = 106/167 (63.47%), Postives = 124/167 (74.25%), Query Frame = 1 

Query: 18  SVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNT---TTVAPHRKLLLTREATIEE 77
           S+ FA VLF+F          NI  S     L L +N    T + PHRKLL T    + E
Sbjct: 11  SLSFA-VLFLFLVALFSGQGKNINGSFGLKLLRLRINQGNHTLLTPHRKLLRT---ALAE 70

Query: 78  PTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHL 137
             RIWGEKC+K+DIVINQGPTAPLP+GIPTYTVE++N CV+GC+I GIH  CGWFSSA L
Sbjct: 71  TNRIWGEKCSKADIVINQGPTAPLPSGIPTYTVEILNVCVSGCDISGIHLTCGWFSSARL 130

Query: 138 INPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           INP++FKRLRY+DCLVNDGKPL+ GGTLSFQYANT+ YPLSVS V+C
Sbjct: 131 INPKIFKRLRYNDCLVNDGKPLINGGTLSFQYANTFLYPLSVSRVVC 173

[Close]
BLAST of Csa1G051700 vs. TAIR10
Match: AT4G24972.1 (AT4G24972.1 tapetum determinant 1)

HSP 1 Score: 164.1 bits (414), Expect = 8.2e-41
Identity = 85/140 (60.71%), Postives = 97/140 (69.29%), Query Frame = 1 

Query: 51  LDLN-TTTVAP---HRKLLLTREATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTG 110
           LDL  TTT +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P G
Sbjct: 37  LDLTKTTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNG 96

Query: 111 IPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGT 170
           IP Y VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G T
Sbjct: 97  IPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGST 156

Query: 171 LSFQYANTYPYPLSVSSVLC 182
           LSF YANT+PY LSV+ V C
Sbjct: 157 LSFHYANTFPYHLSVAFVTC 175

[Close]
BLAST of Csa1G051700 vs. TAIR10
Match: AT1G32583.1 (AT1G32583.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 157.5 bits (397), Expect = 7.7e-39
Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 1 

Query: 47  SFLPLDLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 106
           SF+ ++ N T ++  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YT
Sbjct: 48  SFVSINENRTALS--RKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYT 107

Query: 107 VEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 166
           VE+ N+CV+ C I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQY
Sbjct: 108 VEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQY 167

Query: 167 ANTYPYPLSVSSVLC 182
           AN++ YPLSV+SV C
Sbjct: 168 ANSFSYPLSVASVSC 178

[Close]
BLAST of Csa1G051700 vs. NCBI nr
Match: gi|449472127|ref|XP_004153503.1| (PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis sativus])

HSP 1 Score: 376.7 bits (966), Expect = 2.3e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 

Query: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CM 183
           CM
Sbjct: 181 CM 182

[Close]
BLAST of Csa1G051700 vs. NCBI nr
Match: gi|659067542|ref|XP_008439976.1| (PREDICTED: uncharacterized protein LOC103484600 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 6.9e-98
Identity = 174/182 (95.60%), Postives = 180/182 (98.90%), Query Frame = 1 

Query: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNTTTVAP 60
           MMKELSTTTTTTTTRRVSVIFALV+F+FFF+SA+LTD NIMDS PPSFLPL+LNTTTVAP
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNIMDSSPPSFLPLNLNTTTVAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180
           GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVL 180

Query: 181 CM 183
           C+
Sbjct: 181 CI 182

[Close]
BLAST of Csa1G051700 vs. NCBI nr
Match: gi|802770527|ref|XP_012090642.1| (PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas])

HSP 1 Score: 221.9 bits (564), Expect = 9.4e-55
Identity = 108/162 (66.67%), Postives = 124/162 (76.54%), Query Frame = 1 

Query: 22  ALVLFIFFFVSAILTDPNIMDSGPPSFLPLDLNT--TTVAPHRKLLLTREATIEEPTRIW 81
           A+VL +F F       P        S  P+   T  T  APHRKLL +R   +EEP RIW
Sbjct: 10  AVVLLLFLFTVLTFMPPFFTGGFMGSSHPISKGTSYTLSAPHRKLL-SRSLAMEEPNRIW 69

Query: 82  GEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRV 141
           GEKCTK+DIVINQGPTAPLP+GIPTYTVE++N CVTGC+I GIH  CGWFSSA LINP++
Sbjct: 70  GEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKI 129

Query: 142 FKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           FKRLRY+DCLVNDGKPLV GGTLSF+YANT+ YPLSVSSV+C
Sbjct: 130 FKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVIC 170

[Close]
BLAST of Csa1G051700 vs. NCBI nr
Match: gi|590670477|ref|XP_007038067.1| (Tapetum determinant 1 [Theobroma cacao])

HSP 1 Score: 215.7 bits (548), Expect = 6.7e-53
Identity = 107/161 (66.46%), Postives = 121/161 (75.16%), Query Frame = 1 

Query: 24  VLFIFFFVSAILTDPNIMDSGPPSFLPLDL---NTTTVAPHRKLLLTREATIEEPTRIWG 83
           VLF+F          NI  S     L L +   + T   PHRKLL  R   +EEP RIWG
Sbjct: 16  VLFLFLVALFSGQGKNISSSFGLKLLRLRIKQWDNTLSTPHRKLL--RGMAVEEPNRIWG 75

Query: 84  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVF 143
           EKCTK+DIVINQGPTAPLP+GIPTYTVE+VN CVTGC+I GIH  CGWFSSA LINP++F
Sbjct: 76  EKCTKADIVINQGPTAPLPSGIPTYTVEIVNVCVTGCDISGIHLNCGWFSSARLINPKIF 135

Query: 144 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           KR+RY+DCLVNDGKPLV GGTLSFQYANT+ YPLSVS V+C
Sbjct: 136 KRIRYNDCLVNDGKPLVNGGTLSFQYANTFLYPLSVSRVVC 174

[Close]
BLAST of Csa1G051700 vs. NCBI nr
Match: gi|723683845|ref|XP_010318315.1| (PREDICTED: uncharacterized protein LOC101268557 [Solanum lycopersicum])

HSP 1 Score: 213.0 bits (541), Expect = 4.4e-52
Identity = 104/168 (61.90%), Postives = 122/168 (72.62%), Query Frame = 1 

Query: 17  VSVIFALVLFIFF---FVSAILTDPNIMDSGPPSFLPLDLNTTTVAPHRKLLLTREATIE 76
           +SV+FA  L       F + IL  PN M     +        T V PHRKLL   +    
Sbjct: 15  ISVVFAFFLLFIIGPEFFTGILIGPNFMADANSAIT----GNTNVGPHRKLL--NQGNEV 74

Query: 77  EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAH 136
           E TRIWG+KC+KSDIVINQGPTAPLP+GIPTYTVE++N CV+GC+I GIH  CGWFSSA 
Sbjct: 75  ETTRIWGDKCSKSDIVINQGPTAPLPSGIPTYTVEIMNVCVSGCDISGIHLSCGWFSSAR 134

Query: 137 LINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 182
           LINPR+FKRL +DDCLVNDGKPL+ G T+SFQYANT+ YPLSVSSV+C
Sbjct: 135 LINPRIFKRLHFDDCLVNDGKPLINGHTISFQYANTFRYPLSVSSVVC 176

The following BLAST results are available for this feature:
BLAST of Csa1G051700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TPD1_ARATH1.5e-3960.71Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1[more]
TDL1_ARATH1.4e-3757.04TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1[more]
TDL1A_ORYSJ1.2e-2855.88TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1[more]
TDL1B_ORYSJ4.7e-2233.91TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1[more]
BLAST of Csa1G051700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUG9_CUCSA1.6e-101100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051700 PE=4 SV=1[more]
A0A067JIC3_JATCU6.6e-5566.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26409 PE=4 SV=1[more]
A0A061FZR9_THECC4.7e-5366.46Tapetum determinant 1 OS=Theobroma cacao GN=TCM_014700 PE=4 SV=1[more]
K4BJH0_SOLLC3.0e-5261.90Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A0D2T9S2_GOSRA9.8e-5163.47Uncharacterized protein OS=Gossypium raimondii GN=B456_008G208800 PE=4 SV=1[more]
BLAST of Csa1G051700 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24972.18.2e-4160.71 tapetum determinant 1[more]
AT1G32583.17.7e-3957.04 FUNCTIONS IN: molecular_function unknown[more]
BLAST of Csa1G051700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449472127|ref|XP_004153503.1|2.3e-101100.00PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis sativus][more]
gi|659067542|ref|XP_008439976.1|6.9e-9895.60PREDICTED: uncharacterized protein LOC103484600 [Cucumis melo][more]
gi|802770527|ref|XP_012090642.1|9.4e-5566.67PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas][more]
gi|590670477|ref|XP_007038067.1|6.7e-5366.46Tapetum determinant 1 [Theobroma cacao][more]
gi|723683845|ref|XP_010318315.1|4.4e-5261.90PREDICTED: uncharacterized protein LOC101268557 [Solanum lycopersicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048653 anther development
biological_process GO:0001709 cell fate determination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU165813cucumber EST collection version 3.0transcribed_cluster
CU167778cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G051700.1Csa1G051700.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU167778CU167778transcribed_cluster
CU165813CU165813transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33184FAMILY NOT NAMEDcoord: 16..182
score: 7.5
NoneNo IPR availablePANTHERPTHR33184:SF2TPD1coord: 16..182
score: 7.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G051700Cla002639Watermelon (97103) v1cuwmB008
Csa1G051700MELO3C002379Melon (DHL92) v3.5.1cumeB027
Csa1G051700ClCG03G003950Watermelon (Charleston Gray)cuwcgB035
Csa1G051700Lsi02G005220Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G051700MELO3C002379.2Melon (DHL92) v3.6.1cumedB022
Csa1G051700Cla97C03G055110Watermelon (97103) v2cuwmbB032
Csa1G051700Bhi08G001251Wax gourdcuwgoB032
Csa1G051700CSPI01G09780Wild cucumber (PI 183967)cpicuB000
Csa1G051700Cucsa.134810Cucumber (Gy14) v1cgycuB188
Csa1G051700CmaCh18G003030Cucurbita maxima (Rimu)cmacuB397
Csa1G051700CmaCh13G008230Cucurbita maxima (Rimu)cmacuB204
Csa1G051700CmoCh13G008540Cucurbita moschata (Rifu)cmocuB189
Csa1G051700CmoCh18G002330Cucurbita moschata (Rifu)cmocuB380
Csa1G051700Cp4.1LG20g02950Cucurbita pepo (Zucchini)cpecuB515
Csa1G051700Cp4.1LG09g09510Cucurbita pepo (Zucchini)cpecuB029
Csa1G051700CsGy1G009800Cucumber (Gy14) v2cgybcuB001
Csa1G051700Carg06810Silver-seed gourdcarcuB0523
Csa1G051700Carg07616Silver-seed gourdcarcuB1017
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G051700Silver-seed gourdcarcuB0393
Csa1G051700Watermelon (97103) v2cuwmbB076
Csa1G051700Cucumber (Chinese Long) v2cucuB002
Csa1G051700Cucumber (Gy14) v1cgycuB225
Csa1G051700Cucurbita maxima (Rimu)cmacuB071
Csa1G051700Cucurbita maxima (Rimu)cmacuB112
Csa1G051700Cucurbita moschata (Rifu)cmocuB061
Csa1G051700Cucurbita moschata (Rifu)cmocuB098
Csa1G051700Melon (DHL92) v3.5.1cumeB051
Csa1G051700Watermelon (Charleston Gray)cuwcgB075
Csa1G051700Watermelon (97103) v1cuwmB088
Csa1G051700Cucurbita pepo (Zucchini)cpecuB359
Csa1G051700Cucurbita pepo (Zucchini)cpecuB648
Csa1G051700Bottle gourd (USVL1VR-Ls)culsiB067
Csa1G051700Cucumber (Gy14) v2cgybcuB012
Csa1G051700Melon (DHL92) v3.6.1cumedB043