Cla97C03G055110 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G055110
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	protein TAPETUM DETERMINANT 1
Location	Cla97Chr03 : 4093440 .. 4095169 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAAGATCTATCTACTGCTACTACTCGGCGAGTTTCGGTGATTTTCGCTTCGGTTTTCTTCATCTTCCTTTTGGTATCTGCTTTTCTTAAAGGTATGTATCATTTCTCGCAGTTCGTTCTCCGTCTTGTTTTCAATTTGTTTTTACTGCGTTTTGATTTGTTATACTTTTACGACGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTTTCCTTTTGTTTTGTCTTCTTCTTTCTGTATATTTTATTTGTTCCTCAATCATTGTTTTCCTTTGTCTTTTTCTGCTGCGTATAGAAACAAAGATATTATTCTTGTTCTACTACTTTTTCACAACATTCTCTTCCTTACATGATTGCAGATCTGGATATTATGCACTCAAGTCCACCGATTTTCCCTCGGTTAGGTTTGAACAACTCAATAGTCGCCCCTCATCGGAAGCTTCTCCTCACTAGTAAGTTTATGAAATCTGATTAAATCGTGGTTCGTAAATGTTACAAAAATTCGTTAACGGAGGACTCGTTATTCTTTTCTGAGTTTGTTGTGCAGAATTCTTTTTGTTTAAAATATCCGTTTGATTTTGGAATTATGATCTCGGGGTTGGGGGAAGGGAGAGATTGGGTACTCAATTGCTTAAATGGTTGATTTGGTGTCAGATTTGCACGCCCGTCCATTCTTAGTAATGAAGCTAAGGCGACCTTTTGCTAGGTAGCTTCCAACCCTTCTTTTAGCCCTTTAACCTATATGGCCTTTCTGTAGCTGTTTTTGGAGAAATCTTCTTTAATTGATCCCATATACCCACCAGGCTTTCTTCCTTTTTCTGTCCACAATTCATTGATTACATAAAAGCAACCTTTAGCCCGAAAGCGCGGAGCATTATAATGCCTTTCTCAGTTTTATCTTCTAATTGATTCGAATGAAAAAAAAGCTCTACCGTTGAGTGTGTTTATTAGAAAATCATATATAACGATTAGCTAATGCGTGGACTCTCTTTAGTGGGATGGTTGGGGGTACAATTTTATTAGTTTTAAATTTTCATATGTTTGTAATGGACGTAATTTTGAATATTAAATTTTGTTATGTACAAATGGTCTGATATTTGATAATGCTGCCGCGGATTTTTCTTTTTCAGACTCTCTTTACTCTTTATTTGAATTTGCTTTATCTTTTATAAATGCTTATTTATGCTTTCTCAACACATCCTTTATGAATTTCAGAAAGTGTAGTTTGTGTGTCTGTAGTCTTTTTTTCCCATTGGTGGGTCGATATTTATTTATAAGAGTAATGTTTGCACGTGGGTGGTGCCTTGAACAATGCCCTATATACGATGCTAACAAATGACGTCGACCTGTTTGTTTCATTATTTGAAATGTGCTTTTAGGAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGAGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGTCCCACGGCTCCACTTCCAACTGGTATCCCCACCTACACTGTGGAAGTGGTGAATGCTTGTGTCACTGGATGTGAGATCTATGGTATTCACTTCAAATGCGGTTGGTTTAGCTCAGCCCACCTCATCAATCCCAGAGTCTTCAAACGTCTACGTTACGACGATTGCCTCGTGAATGATGGCAAGCCTCTTGTCTACGGCGGTACACTCTCATTCCAATATGCAAACACTTATCCTTACCCGCTTTCAGTCTCCTCGGTTGTATGCAACTGA

mRNA sequence

ATGATGAAAGATCTATCTACTGCTACTACTCGGCGAGTTTCGGTGATTTTCGCTTCGGTTTTCTTCATCTTCCTTTTGGTATCTGCTTTTCTTAAAGATCTGGATATTATGCACTCAAGTCCACCGATTTTCCCTCGGTTAGGTTTGAACAACTCAATAGTCGCCCCTCATCGGAAGCTTCTCCTCACTAGAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGAGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGTCCCACGGCTCCACTTCCAACTGGTATCCCCACCTACACTGTGGAAGTGGTGAATGCTTGTGTCACTGGATGTGAGATCTATGGTATTCACTTCAAATGCGGTTGGTTTAGCTCAGCCCACCTCATCAATCCCAGAGTCTTCAAACGTCTACGTTACGACGATTGCCTCGTGAATGATGGCAAGCCTCTTGTCTACGGCGGTACACTCTCATTCCAATATGCAAACACTTATCCTTACCCGCTTTCAGTCTCCTCGGTTGTATGCAACTGA

Coding sequence (CDS)

ATGATGAAAGATCTATCTACTGCTACTACTCGGCGAGTTTCGGTGATTTTCGCTTCGGTTTTCTTCATCTTCCTTTTGGTATCTGCTTTTCTTAAAGATCTGGATATTATGCACTCAAGTCCACCGATTTTCCCTCGGTTAGGTTTGAACAACTCAATAGTCGCCCCTCATCGGAAGCTTCTCCTCACTAGAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGAGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGTCCCACGGCTCCACTTCCAACTGGTATCCCCACCTACACTGTGGAAGTGGTGAATGCTTGTGTCACTGGATGTGAGATCTATGGTATTCACTTCAAATGCGGTTGGTTTAGCTCAGCCCACCTCATCAATCCCAGAGTCTTCAAACGTCTACGTTACGACGATTGCCTCGTGAATGATGGCAAGCCTCTTGTCTACGGCGGTACACTCTCATTCCAATATGCAAACACTTATCCTTACCCGCTTTCAGTCTCCTCGGTTGTATGCAACTGA

Protein sequence

MMKDLSTATTRRVSVIFASVFFIFLLVSAFLKDLDIMHSSPPIFPRLGLNNSIVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVCN

Homology

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BLAST of Cla97C03G055110 vs. NCBI nr
Match: XP_022923940.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923942.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923943.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata])

HSP 1 Score: 328.6 bits (841), Expect = 1.4e-86
Identity = 164/181 (90.61%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MMKDLSTATTRRVSVIFASVFFIFLLVSAFLKDLDIMH----SSPPIFPRLGLNNSIVAP 60
           MMKDLS  TTRRVSVIFASVFFIF LVSA L DLDI H    SSPP F RLGLN++I AP
Sbjct: 1   MMKDLS--TTRRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNSTIGAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC+IY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV 178
           GIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV 179

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BLAST of Cla97C03G055110 vs. NCBI nr
Match: XP_023000941.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000942.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000943.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000944.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000945.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima])

HSP 1 Score: 321.6 bits (823), Expect = 1.7e-84
Identity = 160/181 (88.40%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MMKDLSTATTRRVSVIFASVFFIFLLVSAFLKDLDIMHS----SPPIFPRLGLNNSIVAP 60
           MMKDLS  TTRRVSVIF SVFFIF LVSA L DLDI+HS    SPP F R+ L ++I AP
Sbjct: 1   MMKDLS--TTRRVSVIFTSVFFIFFLVSAILTDLDIIHSFMEPSPPSFLRMDLKSAIGAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC+IY
Sbjct: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV 178
           GIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV 179

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BLAST of Cla97C03G055110 vs. NCBI nr
Match: XP_023520053.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita pepo subsp. pepo] >XP_023520054.1 protein TAPETUM DETERMINANT 1-like [Cucurbita pepo subsp. pepo] >XP_023520055.1 protein TAPETUM DETERMINANT 1-like [Cucurbita pepo subsp. pepo] >XP_023520056.1 protein TAPETUM DETERMINANT 1-like [Cucurbita pepo subsp. pepo] >XP_023520057.1 protein TAPETUM DETERMINANT 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 1.7e-84
Identity = 160/181 (88.40%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MMKDLSTATTRRVSVIFASVFFIFLLVSAFLKDLDIMHS----SPPIFPRLGLNNSIVAP 60
           MMKDLST TT+RVSVIFASVFFIF LVSA L DLDI+HS    SPP F R+ L ++I AP
Sbjct: 1   MMKDLST-TTQRVSVIFASVFFIFFLVSAILTDLDIIHSFMEPSPPSFLRMDLKSAIGAP 60

Query: 61  HRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIY 120
           +RKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC+IY
Sbjct: 61  YRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIY 120

Query: 121 GIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV 178
           GIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV
Sbjct: 121 GIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVV 180

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BLAST of Cla97C03G055110 vs. NCBI nr
Match: XP_022137731.1 (protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137732.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137733.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137734.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137735.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 319.7 bits (818), Expect = 6.3e-84
Identity = 159/184 (86.41%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 1   MMKDLSTAT--TRRVSVIFASVFFIFLLVSAFLKDLDI----MHSSPPIFPRLGLNNSIV 60
           M  DLST T  TRRVSVIFASVFFIF  +SA L DLDI    M+SSPP +  LGLN +IV
Sbjct: 2   MKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIV 61

Query: 61  APHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCE 120
           APHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC+
Sbjct: 62  APHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 121

Query: 121 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSS 179
           IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSS
Sbjct: 122 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 181

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BLAST of Cla97C03G055110 vs. NCBI nr
Match: XP_022137736.1 (protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 313.2 bits (801), Expect = 5.9e-82
Identity = 158/184 (85.87%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MMKDLSTAT--TRRVSVIFASVFFIFLLVSAFLKDLDI----MHSSPPIFPRLGLNNSIV 60
           M  DLST T  TRRVSVIFASVFFIF  +SA L DLDI    M+SSPP +  LGLN +IV
Sbjct: 2   MKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIV 61

Query: 61  APHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCE 120
           APHRKLLLT+ ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC+
Sbjct: 62  APHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 121

Query: 121 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSS 179
           IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSS
Sbjct: 122 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 181

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BLAST of Cla97C03G055110 vs. TrEMBL
Match: tr|A0A0A0LUG9|A0A0A0LUG9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051700 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74
Identity = 136/150 (90.67%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 28  SAFLKDLDIMHSSPPIFPRLGLNNSIVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVIN 87
           SA L D +IM S PP F  L LN + VAPHRKLLLTREATIEEPTRIWGEKCTKSDIVIN
Sbjct: 32  SAILTDPNIMDSGPPSFLPLDLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVIN 91

Query: 88  QGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVN 147
           QGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVN
Sbjct: 92  QGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVN 151

Query: 148 DGKPLVYGGTLSFQYANTYPYPLSVSSVVC 178
           DGKPLVYGGTLSFQYANTYPYPLSVSSV+C
Sbjct: 152 DGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

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BLAST of Cla97C03G055110 vs. TrEMBL
Match: tr|A0A1S3B0P8|A0A1S3B0P8_CUCME (protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73
Identity = 133/143 (93.01%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 35  DIMHSSPPIFPRLGLNNSIVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPL 94
           +IM SSPP F  L LN + VAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPL
Sbjct: 39  NIMDSSPPSFLPLNLNTTTVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPL 98

Query: 95  PTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVY 154
           PTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVY
Sbjct: 99  PTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVY 158

Query: 155 GGTLSFQYANTYPYPLSVSSVVC 178
           GGTLSFQYANTYPYPLSVSSV+C
Sbjct: 159 GGTLSFQYANTYPYPLSVSSVLC 181

[Close]

BLAST of Cla97C03G055110 vs. TrEMBL
Match: tr|A0A067JIC3|A0A067JIC3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26409 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 9.0e-55
Identity = 111/177 (62.71%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 2   MKDLSTATTRRVSVIFASVFFIFLLVSAFLKDLDIMHSSPPIFPRLGLNNSIVAPHRKLL 61
           M+D S    R   V+   +F +   +  F      M SS PI    G + ++ APHRK L
Sbjct: 1   MRDFS--KNRLAVVLLLFLFTVLTFMPPFFTG-GFMGSSHPI--SKGTSYTLSAPHRK-L 60

Query: 62  LTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFK 121
           L+R   +EEP RIWGEKCTK+DIVINQGPTAPLP+GIPTYTVE++N CVTGC+I GIH  
Sbjct: 61  LSRSLAMEEPNRIWGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLT 120

Query: 122 CGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVCN 179
           CGWFSSA LINP++FKRLRY+DCLVNDGKPLV GGTLSF+YANT+ YPLSVSSV+C+
Sbjct: 121 CGWFSSARLINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVICS 171

[Close]

BLAST of Cla97C03G055110 vs. TrEMBL
Match: tr|A0A251J9L1|A0A251J9L1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G048200 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.8e-54
Identity = 109/180 (60.56%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 2   MKDLSTATTRRVSVIFASVFFIFLLVSAFLKDLD---IMHSSPPIFPRLGLNNSIVAPHR 61
           M+ +S      V V+  SV  +F+L+ +   D      M SS P+    G  +++  PHR
Sbjct: 41  MRTVSKPRVAVVLVLLISVVLLFMLIVSTAVDYSEGRSMGSSQPV--SKGGKSTLFGPHR 100

Query: 62  KLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGI 121
           K LL R   ++EP RIWG+KCTK+DIVINQG TAPLP+GIPTYTVE++N CVTGC+I GI
Sbjct: 101 K-LLRRSLAVDEPDRIWGDKCTKADIVINQGATAPLPSGIPTYTVEIMNVCVTGCDISGI 160

Query: 122 HFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVCN 179
           HF CGWFSSA LINP++FKR+ Y+DCLVNDGKPLV GGTLSFQYANT+ YPLSVSSVVC+
Sbjct: 161 HFYCGWFSSARLINPKIFKRILYNDCLVNDGKPLVNGGTLSFQYANTFLYPLSVSSVVCS 217

[Close]

BLAST of Cla97C03G055110 vs. TrEMBL
Match: tr|A0A061FZR9|A0A061FZR9_THECC (Tapetum determinant 1 OS=Theobroma cacao OX=3641 GN=TCM_014700 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.0e-53
Identity = 107/163 (65.64%), Postives = 127/163 (77.91%), Query Frame = 0


Query: 19  SVFFIFLLVSAFLKDLDIMHSSPPIFPRLGL---NNSIVAPHRKLLLTREATIEEPTRIW 78
           +V F+FL+     +  +I  S      RL +   +N++  PHRKLL  R   +EEP RIW
Sbjct: 15  AVLFLFLVALFSGQGKNISSSFGLKLLRLRIKQWDNTLSTPHRKLL--RGMAVEEPNRIW 74

Query: 79  GEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRV 138
           GEKCTK+DIVINQGPTAPLP+GIPTYTVE+VN CVTGC+I GIH  CGWFSSA LINP++
Sbjct: 75  GEKCTKADIVINQGPTAPLPSGIPTYTVEIVNVCVTGCDISGIHLNCGWFSSARLINPKI 134

Query: 139 FKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVCN 179
           FKR+RY+DCLVNDGKPLV GGTLSFQYANT+ YPLSVS VVC+
Sbjct: 135 FKRIRYNDCLVNDGKPLVNGGTLSFQYANTFLYPLSVSRVVCS 175

[Close]

BLAST of Cla97C03G055110 vs. Swiss-Prot
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-39
Identity = 78/126 (61.90%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 57  HRKLLLTREATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVT 116
           HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P GIP Y VE+ N C++
Sbjct: 51  HRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMS 110

Query: 117 GCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLS 176
           GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF YANT+PY LS
Sbjct: 111 GCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLS 170

Query: 177 VSSVVC 178
           V+ V C
Sbjct: 171 VAFVTC 175

[Close]

BLAST of Cla97C03G055110 vs. Swiss-Prot
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-38
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 47  LGLNNSIVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVV 106
           + +N +  A  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YTVE+ 
Sbjct: 50  VSINENRTALSRKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIF 109

Query: 107 NACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTY 166
           N+CV+ C I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQYAN++
Sbjct: 110 NSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSF 169

Query: 167 PYPLSVSSVVC 178
            YPLSV+SV C
Sbjct: 170 SYPLSVASVSC 178

[Close]

BLAST of Cla97C03G055110 vs. Swiss-Prot
Match: sp|Q2QR54|TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 83  DIVINQGPTAPLPTGIPTYTVEVVNACV------TGCEIYGIHFKCGWFSSAHLINPRVF 142
           DI I QG   PLP+G+P YTV+V+N C         C I GIH +CGWFSS  L++PRVF
Sbjct: 119 DIAIYQGRATPLPSGVPAYTVDVMNRCAGXXXXDEECAIAGIHVRCGWFSSVSLVDPRVF 178

Query: 143 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 178
           +RL +DDCL+NDG+PL+ G T+SF+Y N++PY LSVS   C
Sbjct: 179 RRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of Cla97C03G055110 vs. Swiss-Prot
Match: sp|Q8S6P9|TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.5e-23
Identity = 45/105 (42.86%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 73  RIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLIN 132
           R+  + C++ ++V+ Q     LP+GIPTY+VE++N C T C +Y +H  CG F+SA L++
Sbjct: 65  RMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVD 124

Query: 133 PRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 178
           P  F+R+ ++DCLV  G  L     +SFQY+N++ YPL+V++V C
Sbjct: 125 PSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of Cla97C03G055110 vs. Swiss-Prot
Match: sp|A8MS78|Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.2e-05
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 101 YTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 160
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 161 SFQYANTYPYPL 171
           SF Y+NT+ + L
Sbjct: 108 SFNYSNTHQFAL 117

[Close]

BLAST of Cla97C03G055110 vs. TAIR10
Match: AT4G24972.1 (tapetum determinant 1)

HSP 1 Score: 163.7 bits (413), Expect = 1.0e-40
Identity = 78/126 (61.90%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 57  HRKLLLTREATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVT 116
           HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P GIP Y VE+ N C++
Sbjct: 51  HRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMS 110

Query: 117 GCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLS 176
           GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF YANT+PY LS
Sbjct: 111 GCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLS 170

Query: 177 VSSVVC 178
           V+ V C
Sbjct: 171 VAFVTC 175

[Close]

BLAST of Cla97C03G055110 vs. TAIR10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 159.8 bits (403), Expect = 1.5e-39
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 47  LGLNNSIVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVV 106
           + +N +  A  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YTVE+ 
Sbjct: 50  VSINENRTALSRKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIF 109

Query: 107 NACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTY 166
           N+CV+ C I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQYAN++
Sbjct: 110 NSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSF 169

Query: 167 PYPLSVSSVVC 178
            YPLSV+SV C
Sbjct: 170 SYPLSVASVSC 178

[Close]

BLAST of Cla97C03G055110 vs. TAIR10
Match: AT1G05835.1 (PHD finger protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.9e-06
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 101 YTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 160
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 161 SFQYANTYPYPL 171
           SF Y+NT+ + L
Sbjct: 108 SFNYSNTHQFAL 117

The following BLAST results are available for this feature:

BLAST of Cla97C03G055110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923940.1	1.4e-86	90.61	protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein ...	[more]
XP_023000941.1	1.7e-84	88.40	protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000942.1 protein TA...	[more]
XP_023520053.1	1.7e-84	88.40	protein TAPETUM DETERMINANT 1-like [Cucurbita pepo subsp. pepo] >XP_023520054.1 ...	[more]
XP_022137731.1	6.3e-84	86.41	protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_02213773...	[more]
XP_022137736.1	5.9e-82	85.87	protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia]	[more]

BLAST of Cla97C03G055110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUG9\|A0A0A0LUG9_CUCSA	1.3e-74	90.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051700 PE=4 SV=1	[more]
tr\|A0A1S3B0P8\|A0A1S3B0P8_CUCME	1.1e-73	93.01	protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1	[more]
tr\|A0A067JIC3\|A0A067JIC3_JATCU	9.0e-55	62.71	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26409 PE=4 SV=1	[more]
tr\|A0A251J9L1\|A0A251J9L1_MANES	5.8e-54	60.56	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G048200 PE=4 SV=...	[more]
tr\|A0A061FZR9\|A0A061FZR9_THECC	1.0e-53	65.64	Tapetum determinant 1 OS=Theobroma cacao OX=3641 GN=TCM_014700 PE=4 SV=1	[more]

BLAST of Cla97C03G055110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6TLJ2\|TPD1_ARATH	1.9e-39	61.90	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
sp\|Q1G3T1\|TDL1_ARATH	2.7e-38	57.25	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
sp\|Q2QR54\|TDL1A_ORYSJ	1.5e-28	55.45	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
sp\|Q8S6P9\|TDL1B_ORYSJ	5.5e-23	42.86	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
sp\|A8MS78\|Y1583_ARATH	5.2e-05	38.89	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of Cla97C03G055110 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24972.1	1.0e-40	61.90	tapetum determinant 1	[more]
AT1G32583.1	1.5e-39	57.25	FUNCTIONS IN: molecular_function unknown	[more]
AT1G05835.1	2.9e-06	38.89	PHD finger protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0001709	cell fate determination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G055110.1	Cla97C03G055110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF2	PROTEIN TAPETUM DETERMINANT 1	coord: 19..177
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 19..177

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G055110	Cla002639	Watermelon (97103) v1	wmwmbB124
Cla97C03G055110	Csa1G051700	Cucumber (Chinese Long) v2	cuwmbB032
Cla97C03G055110	MELO3C002379	Melon (DHL92) v3.5.1	mewmbB156
Cla97C03G055110	ClCG03G003950	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G055110	CSPI01G09780	Wild cucumber (PI 183967)	cpiwmbB032
Cla97C03G055110	Cucsa.134810	Cucumber (Gy14) v1	cgywmbB221
Cla97C03G055110	CmaCh18G003030	Cucurbita maxima (Rimu)	cmawmbB417
Cla97C03G055110	CmaCh13G008230	Cucurbita maxima (Rimu)	cmawmbB227
Cla97C03G055110	CmoCh13G008540	Cucurbita moschata (Rifu)	cmowmbB211
Cla97C03G055110	CmoCh18G002330	Cucurbita moschata (Rifu)	cmowmbB394
Cla97C03G055110	Lsi02G005220	Bottle gourd (USVL1VR-Ls)	lsiwmbB176
Cla97C03G055110	CsGy1G009800	Cucumber (Gy14) v2	cgybwmbB032
Cla97C03G055110	MELO3C002379.2	Melon (DHL92) v3.6.1	medwmbB145
Cla97C03G055110	Carg06810	Silver-seed gourd	carwmbB0517
Cla97C03G055110	Carg07616	Silver-seed gourd	carwmbB1060
Cla97C03G055110	CsaV3_1G009840	Cucumber (Chinese Long) v3	cucwmbB030
Cla97C03G055110	Bhi08G001251	Wax gourd	wgowmbB472

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C03G055110	Watermelon (97103) v2	wmbwmbB118
Cla97C03G055110	Silver-seed gourd	carwmbB0379
Cla97C03G055110	Cucumber (Gy14) v2	cgybwmbB048
Cla97C03G055110	Cucumber (Gy14) v1	cgywmbB263
Cla97C03G055110	Cucurbita maxima (Rimu)	cmawmbB068
Cla97C03G055110	Cucurbita maxima (Rimu)	cmawmbB118
Cla97C03G055110	Cucurbita moschata (Rifu)	cmowmbB055
Cla97C03G055110	Cucurbita moschata (Rifu)	cmowmbB105
Cla97C03G055110	Wild cucumber (PI 183967)	cpiwmbB051
Cla97C03G055110	Cucumber (Chinese Long) v3	cucwmbB048
Cla97C03G055110	Cucumber (Chinese Long) v2	cuwmbB050
Cla97C03G055110	Bottle gourd (USVL1VR-Ls)	lsiwmbB364
Cla97C03G055110	Melon (DHL92) v3.6.1	medwmbB233
Cla97C03G055110	Melon (DHL92) v3.5.1	mewmbB248
Cla97C03G055110	Watermelon (Charleston Gray)	wcgwmbB262
Cla97C03G055110	Watermelon (97103) v1	wmwmbB396
Cla97C03G055110	Wax gourd	wgowmbB071