Cp4.1LG09g09510 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g09510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTapetum determinant 1
LocationCp4.1LG09 : 8497095 .. 8500602 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTTCTTTTTAGTTTCTGAACCGCTCAACTCCTTCCATCTCAGTTCCCTCCTCCGACAACTGCTCCGTCGCCGCCCATCGCTGCCGCGTCACAGTGGTTCACTTTTCTCCTTTCGTATCGTCTCCGTCTTCATCTGCAGCATTGTGTAAGTGCGTATGTCTTTTTGTTAAATCAATGCGTTGAAATGGAACGAAACGATGATATTCAGTTTTTGAGGATCATGCTGTTTTGTTGTTTGCAGGTATCTACGATTTTCGTCTGTGATTTTTGTCTCTCCTAGACGGCTACTGGACTGAACTTTCTCTGCGCCATTTTGCTTTTGTACGTATCGCTCTTCCTCTTCTTCCTTGAACTTTTTTCTGTTTCACTTTTTCTCTCGCGCATGGTGTTCTTAATTGTATCCGTATTCTTCCTTTTCTGGCTCTCGATTTTGTCCTTCTACTTCCTCCATGACTGCCACTTCCCTTGCACCATAACACGCCTCGTTTTTGTTCCATTTCTCTGGATCACTGCTTTGGTTTTTTGCCTGTTTTGAATTTCCTTGAGAATTGTACCTTGACGCGTTCTTCCATTTATATTCATTCGTATTTTTGGCCTATTCCTCTTTTTCATCCAACGATCTGGATTCCACCTTCTGCCTGTCGTTTCCTTAATTTTGCCTATGCTACGCCTAGCAGTGGCGTAACTGGTAAGTATAGTCTGAGACTGAGACTCTGACCGCTGCTCAGGCAATGGTTCTTTAAAGTCAATCAAGTTCTCAGGATATCTTCGTTTCGACGGCTCTTTTTTTTTTTTTTTTTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTCGACTGATTATATTTTAAATGCTATTTTCCTCTCATGATGCGATGTTTTCATTCTTTTTCCAACGCAGGATTTTTAGTTTTCTCCATCTGAACTGCTCTGTTATCAAGGATCGGACTTAACTTTCCGACTCCGAGTTCCATTCCTTCGAGTTCTTTCTTTCACTGTTTCTGAAGAACAGTCCATACTCCATTGCGAATTCTACAGTATTCCTGTTATAAATGATGAAAGGTCTATCTACTAGTACTACTACCCGGCGAGTTTTGGTGATTTTCGCTTCGGTTTTGTTCATCTTCTTGTCCGTATCCGCCTTTCTTACAGGTCTGTATCATCTCTTTCACATTATTCTCTGTCCTCCGCTCATTGTTTTGAATTTGTTTTTGCTGTGGTTGAGTTGTTACACTTATCCATTGCCTCTCTTTGTGTACCTTTCGTTTGTCTTCTTCTATTATTTTATTTGTTTTTCTATCATTGTGCTCCTTGTCCTGTATCTCCTTTGTCCCTTTTGTGCTGCCTATAGAAACAAAGATGTTATTCTTATTCTAGTACTTTTTTACATAATTCCCTGCCTTGCATGATTGCAGATCTGAATATTATTGGTTCCTTTATGGACTCGAGTCCACCGAGTTTTCTTCGATCGGGTTTAAGGAGCACAAGAGTTACCCCTCGTCGCAAACTTCTTACTAGTAAGTTCTTGAAATCTGATCTAATCGTGTTTCGTAAACGTCGGTACAAAATCGTGGACGGAGGACTCGAATTCTGAGTTTGTTGCGCTGTTTTTTGATTTCTCTCTTTTTGTTTTCACTTTTCGTTTCATTTTTGTTTGATTTTGAAATAATGATCTCGGGGTTGAGGGTTGGGAGAGATTGGCTACTCAATTGCATAAATGGTTGATTTGGTGTCAGAATTACACGCCCGTCCATTCTTAGTAATGAAGCTAAGGCGCACCTTTTGCTAGGTAGCTTTCCAGCCCTTCGGCTCTTTAACCCATATGGCCTTTCTGTATCTGTTTTTGGGGAAATCTTCTTTCATAGATCCCTGATACCCATCAGGCTTTCTTCCTGTTCTGTCCACGATTCATTGATTACACAAAAGAAACCTTTGGATCAAAAGCGCGGAGCATTATAATGCCTTTCTGAGTTCTACCTTTGTGGCTTCTAATTGATTCATTCCTTTAAGCCAAAAGCTTTACCGTTAACTGTGTATGTAGAATTATATAATACGATTAGCTGATGCTATATTCTCATTAGTGGGATGGGTGGCGGTAGGACAGTTTTATTAGCTTTTAAATTTATCGTGTATGTAATGGACGTAATTTTAAATTTTCGTTCGTGCTAACAAATTGATTGTGATAAGGAAGTGCTCCCGCGGATTTTTCTTTTTCAGACTCTCTTTTAGTCTTTACCTCTCCTCTATTGCCATTGAATTTGCTTTATCTTTTTTAATTGCTTATTTATGCTTTCTCAACACATCTTTATGACCTCCAGAAAGTGTATTTTGTGTGTCTGGAGACTTTTGGCCCATTGGTGGGTCGATATTTATTTATAAGAGTAATGTTTGCACGTGGTTGGTGCCTGAGCAATGCCCATTATCCGATGCTAACAAATGACGTCGACCCATTTCTTTATTTGAATGTGCTTTAGGAGAAGCAGCATTTGAGGAACCAACCAGAATTTGGGGAGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACAGCTCCACTTCCAACTGGTATTCCCACCTACACTGTGGAAGTGGTGAATGCTTGTGCTACAGGCTGTGACATCCATGGCATTCATTTCAAATGTGGCTGGTTCAGCTCGGCCCACCTCATCAATCCCAGAATCTTCAAGCGCCTTCGCTACGATGACTGCCTCGTTAACGACGGCAAGCCTCTGGTCTACGGCGGAACTCTCTCCTTCCAGTATGCTAACACTTTTCCCTATCCGCTATCAGTCTCCTCAGTTGTCTGCAACTGAAATGACACGCTCCAAACCAACTAGGAGTCGCTCATATGATGCACACTAGAACCAGCAGGTACTTTAGTCGATTACTGATTGACAGTGGCCCCCACCTGCCTTTTCTTTTCCTTTCTTTTCAATTTTTGGGTTCTGCTTTTGCTTTACATGTGCGTGGCCTTGTGTTTCTGTTCCTGCTCCTACGAAGTTTTTCTTTTAGAGAGGTCTGATTTTTACAGTCATCTTGAGGTTTAAGGGAGAAGGTTTGTGGTCTAATAATGGTCATGGCACCAACTTTTCGTATACATAGATGGTGAGATAGGGAAGAAATGCTAGAAACCTAGTTCATTTCAATATTTTTTTTGGGTGTTGATGAGATAGGCGATCGAGGTGTAGGTAAGGCCAAAGTGTATATATATAGTTATATACAATCTGATAGCATGATGTTAGTGTCACAAATTCAGGAGATTCAAAGCCCCATTATATGCAAGAATATTTCTCTGTTTGTTTGGTTGCCTATAAATTATCTATTAATTTGTCACATCCTCTCTCACGCGGAACACATTTGTAGGCCATGATTCATCAATATAGAAAGAAAGCTGGTTTTCCTTTTTGTTGGTTTCGCCTTT

mRNA sequence

TTTTTTTTTTTTTCTTTTTAGTTTCTGAACCGCTCAACTCCTTCCATCTCAGTTCCCTCCTCCGACAACTGCTCCGTCGCCGCCCATCGCTGCCGCGTCACAGTGGTTCACTTTTCTCCTTTCGTATCGTCTCCGTCTTCATCTGCAGCATTGTGTATCTACGATTTTCGTCTGTGATTTTTGTCTCTCCTAGACGGCTACTGGACTGAACTTTCTCTGCGCCATTTTGCTTTTGATTTTTAGTTTTCTCCATCTGAACTGCTCTGTTATCAAGGATCGGACTTAACTTTCCGACTCCGAGTTCCATTCCTTCGAGTTCTTTCTTTCACTGTTTCTGAAGAACAGTCCATACTCCATTGCGAATTCTACAGTATTCCTGTTATAAATGATGAAAGGTCTATCTACTAGTACTACTACCCGGCGAGTTTTGGTGATTTTCGCTTCGGTTTTGTTCATCTTCTTGTCCGTATCCGCCTTTCTTACAGATCTGAATATTATTGGTTCCTTTATGGACTCGAGTCCACCGAGTTTTCTTCGATCGGGTTTAAGGAGCACAAGAGTTACCCCTCGTCGCAAACTTCTTACTAGTAAGTTCTTGAAATCTGATCTAATCGTGTTTCGTAAACGTCGAATTACACGCCCGTCCATTCTTAGTAATGAAGCTAAGGCGCACCTTTTGCTAGGAGAAGCAGCATTTGAGGAACCAACCAGAATTTGGGGAGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACAGCTCCACTTCCAACTGGTATTCCCACCTACACTGTGGAAGTGGTGAATGCTTGTGCTACAGGCTGTGACATCCATGGCATTCATTTCAAATGTGGCTGGTTCAGCTCGGCCCACCTCATCAATCCCAGAATCTTCAAGCGCCTTCGCTACGATGACTGCCTCGTTAACGACGGCAAGCCTCTGGTCTACGGCGGAACTCTCTCCTTCCAGTATGCTAACACTTTTCCCTATCCGCTATCAGTCTCCTCAGTTGTCTGCAACTGAAATGACACGCTCCAAACCAACTAGGAGTCGCTCATATGATGCACACTAGAACCAGCAGGTACTTTAGTCGATTACTGATTGACAGTGGCCCCCACCTGCCTTTTCTTTTCCTTTCTTTTCAATTTTTGGGTTCTGCTTTTGCTTTACATGTGCGTGGCCTTGTGTTTCTGTTCCTGCTCCTACGAAGTTTTTCTTTTAGAGAGGTCTGATTTTTACAGTCATCTTGAGGTTTAAGGGAGAAGGTTTGTGGTCTAATAATGGTCATGGCACCAACTTTTCGTATACATAGATGGTGAGATAGGGAAGAAATGCTAGAAACCTAGTTCATTTCAATATTTTTTTTGGGTGTTGATGAGATAGGCGATCGAGGTGTAGGTAAGGCCAAAGTGTATATATATAGTTATATACAATCTGATAGCATGATGTTAGTGTCACAAATTCAGGAGATTCAAAGCCCCATTATATGCAAGAATATTTCTCTGTTTGTTTGGTTGCCTATAAATTATCTATTAATTTGTCACATCCTCTCTCACGCGGAACACATTTGTAGGCCATGATTCATCAATATAGAAAGAAAGCTGGTTTTCCTTTTTGTTGGTTTCGCCTTT

Coding sequence (CDS)

ATGATGAAAGGTCTATCTACTAGTACTACTACCCGGCGAGTTTTGGTGATTTTCGCTTCGGTTTTGTTCATCTTCTTGTCCGTATCCGCCTTTCTTACAGATCTGAATATTATTGGTTCCTTTATGGACTCGAGTCCACCGAGTTTTCTTCGATCGGGTTTAAGGAGCACAAGAGTTACCCCTCGTCGCAAACTTCTTACTAGTAAGTTCTTGAAATCTGATCTAATCGTGTTTCGTAAACGTCGAATTACACGCCCGTCCATTCTTAGTAATGAAGCTAAGGCGCACCTTTTGCTAGGAGAAGCAGCATTTGAGGAACCAACCAGAATTTGGGGAGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACAGCTCCACTTCCAACTGGTATTCCCACCTACACTGTGGAAGTGGTGAATGCTTGTGCTACAGGCTGTGACATCCATGGCATTCATTTCAAATGTGGCTGGTTCAGCTCGGCCCACCTCATCAATCCCAGAATCTTCAAGCGCCTTCGCTACGATGACTGCCTCGTTAACGACGGCAAGCCTCTGGTCTACGGCGGAACTCTCTCCTTCCAGTATGCTAACACTTTTCCCTATCCGCTATCAGTCTCCTCAGTTGTCTGCAACTGA

Protein sequence

MMKGLSTSTTTRRVLVIFASVLFIFLSVSAFLTDLNIIGSFMDSSPPSFLRSGLRSTRVTPRRKLLTSKFLKSDLIVFRKRRITRPSILSNEAKAHLLLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN
Homology
[Close]
BLAST of Cp4.1LG09g09510 vs. Swiss-Prot
Match: TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-38
Identity = 72/108 (66.67%), Postives = 82/108 (75.93%), Query Frame = 1 

Query: 106 EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAH 165
           EP RI GEKC  +DIV+NQ  T P+P GIP Y VE+ N C +GC I  IH  CGWFSSA 
Sbjct: 69  EPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAK 128

Query: 166 LINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           LINPR+FKR+ YDDCLVN+GKPL +G TLSF YANTFPY LSV+ V C
Sbjct: 129 LINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]
BLAST of Cp4.1LG09g09510 vs. Swiss-Prot
Match: TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-36
Identity = 70/117 (59.83%), Postives = 88/117 (75.21%), Query Frame = 1 

Query: 97  LLLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHF 156
           LLL     +   RI G+ C+K DIV+ QG T PLP+G+P+YTVE+ N+C + C+I  IH 
Sbjct: 63  LLLSPDIGDGTNRI-GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHV 122

Query: 157 KCGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
            CGWFSS  L+NPR+F+RL YDDCLVNDG+PL  G +LSFQYAN+F YPLSV+SV C
Sbjct: 123 SCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]
BLAST of Cp4.1LG09g09510 vs. Swiss-Prot
Match: TDL1A_ORYSJ (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-30
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1 

Query: 119 DIVINQGPTAPLPTGIPTYTVEVVNACATG------CDIHGIHFKCGWFSSAHLINPRIF 178
           DI I QG   PLP+G+P YTV+V+N CA G      C I GIH +CGWFSS  L++PR+F
Sbjct: 119 DIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVF 178

Query: 179 KRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           +RL +DDCL+NDG+PL+ G T+SF+Y N+FPY LSVS   C
Sbjct: 179 RRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]
BLAST of Cp4.1LG09g09510 vs. Swiss-Prot
Match: TDL1B_ORYSJ (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-23
Identity = 45/105 (42.86%), Postives = 72/105 (68.57%), Query Frame = 1 

Query: 109 RIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAHLIN 168
           R+  + C++ ++V+ Q     LP+GIPTY+VE++N C T C ++ +H  CG F+SA L++
Sbjct: 65  RMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVD 124

Query: 169 PRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           P  F+R+ ++DCLV  G  L     +SFQY+N+F YPL+V++V C
Sbjct: 125 PSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]
BLAST of Cp4.1LG09g09510 vs. TrEMBL
Match: A0A0A0LUG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051700 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.7e-73
Identity = 150/216 (69.44%), Postives = 159/216 (73.61%), Query Frame = 1 

Query: 1   MMKGLSTSTTT---RRVLVIFASVLFIFLSVSAFLTDLNIIGSFMDSSPPSFLRSGLRST 60
           MMK LST+TTT   RRV VIFA VLFIF  VSA LTD NI    MDS PPSFL   L +T
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNI----MDSGPPSFLPLDLNTT 60

Query: 61  RVTPRRKLLTSKFLKSDLIVFRKRRITRPSILSNEAKAHLLLGEAAFEEPTRIWGEKCTK 120
            V P RKLL ++                               EA  EEPTRIWGEKCTK
Sbjct: 61  TVAPHRKLLLTR-------------------------------EATIEEPTRIWGEKCTK 120

Query: 121 SDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAHLINPRIFKRLRY 180
           SDIVINQGPTAPLPTGIPTYTVEVVNAC TGC+I+GIHFKCGWFSSAHLINPR+FKRLRY
Sbjct: 121 SDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRY 180

Query: 181 DDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           DDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSSV+C
Sbjct: 181 DDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

[Close]
BLAST of Cp4.1LG09g09510 vs. TrEMBL
Match: A0A067JIC3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26409 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-52
Identity = 95/118 (80.51%), Postives = 104/118 (88.14%), Query Frame = 1 

Query: 97  LLLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHF 156
           LL    A EEP RIWGEKCTK+DIVINQGPTAPLP+GIPTYTVE++N C TGCDI GIH 
Sbjct: 54  LLSRSLAMEEPNRIWGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHL 113

Query: 157 KCGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 215
            CGWFSSA LINP+IFKRLRY+DCLVNDGKPLV GGTLSF+YANTF YPLSVSSV+C+
Sbjct: 114 TCGWFSSARLINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVICS 171

[Close]
BLAST of Cp4.1LG09g09510 vs. TrEMBL
Match: A0A061FZR9_THECC (Tapetum determinant 1 OS=Theobroma cacao GN=TCM_014700 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.6e-52
Identity = 96/117 (82.05%), Postives = 103/117 (88.03%), Query Frame = 1 

Query: 98  LLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFK 157
           LL   A EEP RIWGEKCTK+DIVINQGPTAPLP+GIPTYTVE+VN C TGCDI GIH  
Sbjct: 59  LLRGMAVEEPNRIWGEKCTKADIVINQGPTAPLPSGIPTYTVEIVNVCVTGCDISGIHLN 118

Query: 158 CGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 215
           CGWFSSA LINP+IFKR+RY+DCLVNDGKPLV GGTLSFQYANTF YPLSVS VVC+
Sbjct: 119 CGWFSSARLINPKIFKRIRYNDCLVNDGKPLVNGGTLSFQYANTFLYPLSVSRVVCS 175

[Close]
BLAST of Cp4.1LG09g09510 vs. TrEMBL
Match: V7AW39_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G162500g PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.4e-50
Identity = 90/117 (76.92%), Postives = 102/117 (87.18%), Query Frame = 1 

Query: 97  LLLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHF 156
           LL  E    EP RIWGEKC+KSDIVINQGPTAPLP+GIPTYTVE++N C +GCDI GIH 
Sbjct: 62  LLTSENGKMEPNRIWGEKCSKSDIVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHL 121

Query: 157 KCGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           +CGWFSSA LINP++FKRLRY+DCLVNDG+PL+ G T+SFQYANTF YPLSVSSVVC
Sbjct: 122 RCGWFSSARLINPKVFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSSVVC 178

[Close]
BLAST of Cp4.1LG09g09510 vs. TrEMBL
Match: A0A0S3RFB3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G224700 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-49
Identity = 92/149 (61.74%), Postives = 112/149 (75.17%), Query Frame = 1 

Query: 65  LLTSKFLKSDLIVFRKRRITRPSILSNEAKAHLLLGEAAFEEPTRIWGEKCTKSDIVINQ 124
           L   + L   ++    RR+   +   + +   LL       EP RIWGEKC+KSDIVINQ
Sbjct: 30  LAGGRTLSGTMVSVSSRRVEEGNRKLHSSHRKLLTSGNGKMEPNRIWGEKCSKSDIVINQ 89

Query: 125 GPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAHLINPRIFKRLRYDDCLVND 184
           GPTAPLP+GIPTYTVE++N C +GCDI GIH +CGWFSSA LINP++FKRLRY+DCLVND
Sbjct: 90  GPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSARLINPKVFKRLRYNDCLVND 149

Query: 185 GKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           G+PL+ G T+SFQYANTF YPLSVSSV+C
Sbjct: 150 GRPLINGATISFQYANTFLYPLSVSSVIC 178

[Close]
BLAST of Cp4.1LG09g09510 vs. TAIR10
Match: AT4G24972.1 (AT4G24972.1 tapetum determinant 1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39
Identity = 72/108 (66.67%), Postives = 82/108 (75.93%), Query Frame = 1 

Query: 106 EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAH 165
           EP RI GEKC  +DIV+NQ  T P+P GIP Y VE+ N C +GC I  IH  CGWFSSA 
Sbjct: 69  EPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAK 128

Query: 166 LINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           LINPR+FKR+ YDDCLVN+GKPL +G TLSF YANTFPY LSV+ V C
Sbjct: 129 LINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]
BLAST of Cp4.1LG09g09510 vs. TAIR10
Match: AT1G32583.1 (AT1G32583.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 154.1 bits (388), Expect = 9.9e-38
Identity = 70/117 (59.83%), Postives = 88/117 (75.21%), Query Frame = 1 

Query: 97  LLLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHF 156
           LLL     +   RI G+ C+K DIV+ QG T PLP+G+P+YTVE+ N+C + C+I  IH 
Sbjct: 63  LLLSPDIGDGTNRI-GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHV 122

Query: 157 KCGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
            CGWFSS  L+NPR+F+RL YDDCLVNDG+PL  G +LSFQYAN+F YPLSV+SV C
Sbjct: 123 SCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]
BLAST of Cp4.1LG09g09510 vs. TAIR10
Match: AT1G05835.1 (AT1G05835.1 PHD finger protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.5e-06
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 1 

Query: 137 YTVEVVNACATGCDIHGIHFKCGWFSSAHLINPRIFKRLRYD--DCLVNDGKPLVYGGTL 196
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 197 SFQYANTFPYPL 207
           SF Y+NT  + L
Sbjct: 108 SFNYSNTHQFAL 117

[Close]
BLAST of Cp4.1LG09g09510 vs. NCBI nr
Match: gi|449472127|ref|XP_004153503.1| (PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 5.3e-73
Identity = 150/216 (69.44%), Postives = 159/216 (73.61%), Query Frame = 1 

Query: 1   MMKGLSTSTTT---RRVLVIFASVLFIFLSVSAFLTDLNIIGSFMDSSPPSFLRSGLRST 60
           MMK LST+TTT   RRV VIFA VLFIF  VSA LTD NI    MDS PPSFL   L +T
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVLFIFFFVSAILTDPNI----MDSGPPSFLPLDLNTT 60

Query: 61  RVTPRRKLLTSKFLKSDLIVFRKRRITRPSILSNEAKAHLLLGEAAFEEPTRIWGEKCTK 120
            V P RKLL ++                               EA  EEPTRIWGEKCTK
Sbjct: 61  TVAPHRKLLLTR-------------------------------EATIEEPTRIWGEKCTK 120

Query: 121 SDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAHLINPRIFKRLRY 180
           SDIVINQGPTAPLPTGIPTYTVEVVNAC TGC+I+GIHFKCGWFSSAHLINPR+FKRLRY
Sbjct: 121 SDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRY 180

Query: 181 DDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           DDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSSV+C
Sbjct: 181 DDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

[Close]
BLAST of Cp4.1LG09g09510 vs. NCBI nr
Match: gi|659067542|ref|XP_008439976.1| (PREDICTED: uncharacterized protein LOC103484600 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 6.9e-73
Identity = 148/216 (68.52%), Postives = 160/216 (74.07%), Query Frame = 1 

Query: 1   MMKGLSTSTTT---RRVLVIFASVLFIFLSVSAFLTDLNIIGSFMDSSPPSFLRSGLRST 60
           MMK LST+TTT   RRV VIFA V+F+F  +SA LTD NI    MDSSPPSFL   L +T
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60

Query: 61  RVTPRRKLLTSKFLKSDLIVFRKRRITRPSILSNEAKAHLLLGEAAFEEPTRIWGEKCTK 120
            V P RKLL ++                               EA  EEPTRIWGEKCTK
Sbjct: 61  TVAPHRKLLLTR-------------------------------EATIEEPTRIWGEKCTK 120

Query: 121 SDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAHLINPRIFKRLRY 180
           SDIVINQGPTAPLPTGIPTYTVEVVNAC TGC+I+GIHFKCGWFSSAHLINPR+FKRLRY
Sbjct: 121 SDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVFKRLRY 180

Query: 181 DDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 214
           DDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSSV+C
Sbjct: 181 DDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

[Close]
BLAST of Cp4.1LG09g09510 vs. NCBI nr
Match: gi|1009169756|ref|XP_015865836.1| (PREDICTED: TPD1 protein homolog 1-like, partial [Ziziphus jujuba])

HSP 1 Score: 217.2 bits (552), Expect = 2.7e-53
Identity = 93/119 (78.15%), Postives = 106/119 (89.08%), Query Frame = 1 

Query: 96  HLLLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIH 155
           ++L    A E+P RIWGEKCTKSDIVINQGPT PLP+GIPTYTVE++N C TGCDI+GIH
Sbjct: 5   YVLYTAKAVEQPDRIWGEKCTKSDIVINQGPTGPLPSGIPTYTVEIMNVCVTGCDIYGIH 64

Query: 156 FKCGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 215
             CGWFSSAHL+NP++FKRLRYDDCLVNDGKPL+ GGTLSFQYANTF YPLSVSSV+C+
Sbjct: 65  LSCGWFSSAHLVNPKVFKRLRYDDCLVNDGKPLINGGTLSFQYANTFLYPLSVSSVICS 123

[Close]
BLAST of Cp4.1LG09g09510 vs. NCBI nr
Match: gi|802770527|ref|XP_012090642.1| (PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas])

HSP 1 Score: 213.8 bits (543), Expect = 3.0e-52
Identity = 95/118 (80.51%), Postives = 104/118 (88.14%), Query Frame = 1 

Query: 97  LLLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHF 156
           LL    A EEP RIWGEKCTK+DIVINQGPTAPLP+GIPTYTVE++N C TGCDI GIH 
Sbjct: 54  LLSRSLAMEEPNRIWGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHL 113

Query: 157 KCGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 215
            CGWFSSA LINP+IFKRLRY+DCLVNDGKPLV GGTLSF+YANTF YPLSVSSV+C+
Sbjct: 114 TCGWFSSARLINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVICS 171

[Close]
BLAST of Cp4.1LG09g09510 vs. NCBI nr
Match: gi|590670477|ref|XP_007038067.1| (Tapetum determinant 1 [Theobroma cacao])

HSP 1 Score: 213.0 bits (541), Expect = 5.1e-52
Identity = 96/117 (82.05%), Postives = 103/117 (88.03%), Query Frame = 1 

Query: 98  LLGEAAFEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFK 157
           LL   A EEP RIWGEKCTK+DIVINQGPTAPLP+GIPTYTVE+VN C TGCDI GIH  
Sbjct: 59  LLRGMAVEEPNRIWGEKCTKADIVINQGPTAPLPSGIPTYTVEIVNVCVTGCDISGIHLN 118

Query: 158 CGWFSSAHLINPRIFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 215
           CGWFSSA LINP+IFKR+RY+DCLVNDGKPLV GGTLSFQYANTF YPLSVS VVC+
Sbjct: 119 CGWFSSARLINPKIFKRIRYNDCLVNDGKPLVNGGTLSFQYANTFLYPLSVSRVVCS 175

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g09510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TPD1_ARATH1.9e-3866.67Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana GN=TPD1 PE=1 SV=1[more]
TDL1_ARATH1.8e-3659.83TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1[more]
TDL1A_ORYSJ4.2e-3057.43TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica GN=TDL1A PE=1 SV=1[more]
TDL1B_ORYSJ8.5e-2342.86TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica GN=TDL1B PE=2 SV=1[more]
BLAST of Cp4.1LG09g09510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUG9_CUCSA3.7e-7369.44Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051700 PE=4 SV=1[more]
A0A067JIC3_JATCU2.1e-5280.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26409 PE=4 SV=1[more]
A0A061FZR9_THECC3.6e-5282.05Tapetum determinant 1 OS=Theobroma cacao GN=TCM_014700 PE=4 SV=1[more]
V7AW39_PHAVU7.4e-5076.92Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G162500g PE=4 SV=1[more]
A0A0S3RFB3_PHAAN1.3e-4961.74Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G224700 PE=... [more]
BLAST of Cp4.1LG09g09510 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24972.11.1e-3966.67 tapetum determinant 1[more]
AT1G32583.19.9e-3859.83 FUNCTIONS IN: molecular_function unknown[more]
AT1G05835.14.5e-0638.89 PHD finger protein[more]
BLAST of Cp4.1LG09g09510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449472127|ref|XP_004153503.1|5.3e-7369.44PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis sativus][more]
gi|659067542|ref|XP_008439976.1|6.9e-7368.52PREDICTED: uncharacterized protein LOC103484600 [Cucumis melo][more]
gi|1009169756|ref|XP_015865836.1|2.7e-5378.15PREDICTED: TPD1 protein homolog 1-like, partial [Ziziphus jujuba][more]
gi|802770527|ref|XP_012090642.1|3.0e-5280.51PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas][more]
gi|590670477|ref|XP_007038067.1|5.1e-5282.05Tapetum determinant 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048653 anther development
biological_process GO:0001709 cell fate determination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09510.1Cp4.1LG09g09510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33184FAMILY NOT NAMEDcoord: 106..214
score: 1.3
NoneNo IPR availablePANTHERPTHR33184:SF2TPD1coord: 106..214
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g09510Cucsa.134810Cucumber (Gy14) v1cgycpeB0357
Cp4.1LG09g09510CmaCh13G008230Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g09510CmaCh18G003030Cucurbita maxima (Rimu)cmacpeB414
Cp4.1LG09g09510CmoCh18G002330Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g09510CmoCh13G008540Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g09510Cla002639Watermelon (97103) v1cpewmB025
Cp4.1LG09g09510Csa1G051700Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g09510MELO3C002379Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g09510ClCG03G003950Watermelon (Charleston Gray)cpewcgB036
Cp4.1LG09g09510CSPI01G09780Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g09510Lsi02G005220Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g09510MELO3C002379.2Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g09510CsaV3_1G009840Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g09510Bhi08G001251Wax gourdcpewgoB0048
Cp4.1LG09g09510CsGy1G009800Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g09510Carg07616Silver-seed gourdcarcpeB1396
Cp4.1LG09g09510Carg06810Silver-seed gourdcarcpeB0694
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g09510Cp4.1LG20g02950Cucurbita pepo (Zucchini)cpecpeB045
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g09510Cucurbita pepo (Zucchini)cpecpeB029
Cp4.1LG09g09510Cucumber (Gy14) v1cgycpeB0419
Cp4.1LG09g09510Cucurbita moschata (Rifu)cmocpeB045
Cp4.1LG09g09510Watermelon (Charleston Gray)cpewcgB051
Cp4.1LG09g09510Watermelon (97103) v1cpewmB061
Cp4.1LG09g09510Cucumber (Gy14) v2cgybcpeB015
Cp4.1LG09g09510Melon (DHL92) v3.6.1cpemedB041
Cp4.1LG09g09510Silver-seed gourdcarcpeB0507
Cp4.1LG09g09510Cucumber (Chinese Long) v3cpecucB0029