CsGy3G013630 (gene) Cucumber (Gy14) v2

NameCsGy3G013630
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionEF-hand calcium-binding domain-containing protein 4A
LocationChr3 : 10158833 .. 10159491 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGGATTTGGTGTTTTCCCTCTTGGTAGCTGCTTTGATGGGTGTAGAGACCATGCTCAAGCGTCGGGATTCGGCACTCGAATATGGAACTTGAGCGATAGACCAGTAGAGCTGCAGATAAGGGTGGGATCGATATTGAAAAAAGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGTATTTACAAAGCATATATGCCAGGAAGAAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGTCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATACGTCAGTCTTGAAGATCTAAGGGAGTTTTCTGAGATCAGAATCTTTAGGGATCATCAACGTGGCTGCATATCGGTTCGTAAGAAACAGAGGCCCGATTTTTGCTGATTTTTACACTCATAAATGTTTTTGCCTTCAACCTTTGTAACTTCTATATGAATGTTGTTCTTGTTTATGAAGTCTGCAATGTCCACTTGTCTTTCCATGTTCTGTTTTTTCTTTGGAAGTGAACAAAATCAGATGACATTGTTTTGGTGTATTGCTTTAAACACCCAGAATTCTCTTGCTGTATTTGTTTCTTTCTTTTGCCTTCTCAGTCAGACTACTTGTATTCTTAG

mRNA sequence

ATGCCAGGATTTGGTGTTTTCCCTCTTGGTAGCTGCTTTGATGGGTGTAGAGACCATGCTCAAGCGTCGGGATTCGGCACTCGAATATGGAACTTGAGCGATAGACCAGTAGAGCTGCAGATAAGGGTGGGATCGATATTGAAAAAAGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGTATTTACAAAGCATATATGCCAGGAAGAAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGTCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATACGTCAGTCTTGAAGATCTAAGGGAGTTTTCTGAGATCAGAATCTTTAGGGATCATCAACGTGGCTGCATATCGGTTCACTACTTGTATTCTTAG

Coding sequence (CDS)

ATGCCAGGATTTGGTGTTTTCCCTCTTGGTAGCTGCTTTGATGGGTGTAGAGACCATGCTCAAGCGTCGGGATTCGGCACTCGAATATGGAACTTGAGCGATAGACCAGTAGAGCTGCAGATAAGGGTGGGATCGATATTGAAAAAAGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGTATTTACAAAGCATATATGCCAGGAAGAAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGTCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATACGTCAGTCTTGAAGATCTAAGGGAGTTTTCTGAGATCAGAATCTTTAGGGATCATCAACGTGGCTGCATATCGGTTCACTACTTGTATTCTTAG

Protein sequence

MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEIRIFRDHQRGCISVHYLYS
BLAST of CsGy3G013630 vs. NCBI nr
Match: XP_011650993.1 (PREDICTED: uncharacterized protein LOC105434839 [Cucumis sativus] >KGN57027.1 hypothetical protein Csa_3G150060 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 2.3e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR
Sbjct: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120
           LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI
Sbjct: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120

Query: 121 RIFRDHQRGCISV 134
           RIFRDHQRGCISV
Sbjct: 121 RIFRDHQRGCISV 133

BLAST of CsGy3G013630 vs. NCBI nr
Match: XP_008438723.1 (PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 3.0e-73
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKR
Sbjct: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRVWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120
           LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI
Sbjct: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120

Query: 121 RIFRDHQRGCISV 134
           RIFRDHQRGCISV
Sbjct: 121 RIFRDHQRGCISV 133

BLAST of CsGy3G013630 vs. NCBI nr
Match: XP_022936946.1 (uncharacterized protein LOC111443378 [Cucurbita moschata])

HSP 1 Score: 282.0 bits (720), Expect = 1.1e-72
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR
Sbjct: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120
           LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQ++SLEDLREFSEI
Sbjct: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQFISLEDLREFSEI 120

Query: 121 RIFRDHQRGCISV 134
           RIFRDHQRGC+SV
Sbjct: 121 RIFRDHQRGCVSV 133

BLAST of CsGy3G013630 vs. NCBI nr
Match: XP_023522910.1 (uncharacterized protein LOC111786960 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRP+ELQIRVGSILKKVHSLKPGCSKR
Sbjct: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPIELQIRVGSILKKVHSLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120
           LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQ++SLEDLREFSEI
Sbjct: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQFISLEDLREFSEI 120

Query: 121 RIFRDHQRGCISV 134
           RIFRDHQRGC+SV
Sbjct: 121 RIFRDHQRGCVSV 133

BLAST of CsGy3G013630 vs. NCBI nr
Match: XP_022973671.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111472255 [Cucurbita maxima])

HSP 1 Score: 278.5 bits (711), Expect = 1.2e-71
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGFGVFPLGSCFDGCRDH QASGFGTRIWNLSDRPVELQIRVG ILKKVHSLKPGCSKR
Sbjct: 1   MPGFGVFPLGSCFDGCRDHTQASGFGTRIWNLSDRPVELQIRVGXILKKVHSLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120
           LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQ++SLEDLREFSEI
Sbjct: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQFISLEDLREFSEI 120

Query: 121 RIFRDHQRGCISV 134
           RIFRDHQRGC+SV
Sbjct: 121 RIFRDHQRGCVSV 133

BLAST of CsGy3G013630 vs. TAIR10
Match: AT3G06145.1 (unknown protein)

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-39
Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 0

Query: 9   LGSCFDGCRDH-----AQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKC 68
           L  C+ GC D         +   TR WNLSDRPVELQIRVGSILK+VH+LKPG SK+L+ 
Sbjct: 28  LRQCYGGCGDRTHLLPCSIATTSTRFWNLSDRPVELQIRVGSILKRVHTLKPGRSKKLRH 87

Query: 69  KSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEIRIF 128
           +SI++AY+  +  +  L YYD+ C PYVW+HE+G D  +MVKQQYVSLEDLR++SEIR+F
Sbjct: 88  RSIHRAYVDDQEGRRWL-YYDDTCLPYVWVHETGTDLSKMVKQQYVSLEDLRDYSEIRVF 147

Query: 129 RDHQRGCISV 134
           +D QRGC++V
Sbjct: 148 KDLQRGCVAV 156

BLAST of CsGy3G013630 vs. TrEMBL
Match: tr|A0A0A0L8V0|A0A0A0L8V0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150060 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR
Sbjct: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120
           LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI
Sbjct: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120

Query: 121 RIFRDHQRGCISV 134
           RIFRDHQRGCISV
Sbjct: 121 RIFRDHQRGCISV 133

BLAST of CsGy3G013630 vs. TrEMBL
Match: tr|A0A1S3AWR3|A0A1S3AWR3_CUCME (uncharacterized protein LOC103483746 OS=Cucumis melo OX=3656 GN=LOC103483746 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKR
Sbjct: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRVWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120
           LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI
Sbjct: 61  LKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDLREFSEI 120

Query: 121 RIFRDHQRGCISV 134
           RIFRDHQRGCISV
Sbjct: 121 RIFRDHQRGCISV 133

BLAST of CsGy3G013630 vs. TrEMBL
Match: tr|A0A1R3IS40|A0A1R3IS40_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21648 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.2e-64
Identity = 115/142 (80.99%), Postives = 125/142 (88.03%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPG G+FP G CFDGCRDH QASGFGTR+WNLSDRPVELQ+RVGSILKKVH+LKPGCSKR
Sbjct: 1   MPGLGIFPFGGCFDGCRDHTQASGFGTRVWNLSDRPVELQVRVGSILKKVHTLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRS---------MKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSL 120
           LKCKSIYKAYMPGRS         MKSLLYYYDE C PY+W+H++GGDS RMVKQQY+SL
Sbjct: 61  LKCKSIYKAYMPGRSGNNGSANAGMKSLLYYYDETCHPYIWVHDTGGDSSRMVKQQYISL 120

Query: 121 EDLREFSEIRIFRDHQRGCISV 134
           EDLR+ SEIRIFRDHQRGCISV
Sbjct: 121 EDLRDCSEIRIFRDHQRGCISV 142

BLAST of CsGy3G013630 vs. TrEMBL
Match: tr|A0A1R3GAK7|A0A1R3GAK7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27392 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.3e-64
Identity = 114/143 (79.72%), Postives = 125/143 (87.41%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPG G+FP G CFDGCRDH Q+SGFGTR+WNLSDRPVELQ+RVGSILKKVH+LKPGCSKR
Sbjct: 1   MPGLGIFPFGGCFDGCRDHTQSSGFGTRVWNLSDRPVELQVRVGSILKKVHTLKPGCSKR 60

Query: 61  LKCKSIYKAYMPGRS----------MKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVS 120
           LKCKSIYKAYMPGRS          MKSLLYYYDE C PY+W+H++GGDS RMVKQQY+S
Sbjct: 61  LKCKSIYKAYMPGRSGNNGSANYAGMKSLLYYYDETCHPYIWVHDTGGDSSRMVKQQYIS 120

Query: 121 LEDLREFSEIRIFRDHQRGCISV 134
           LEDLR+ SEIRIFRDHQRGCISV
Sbjct: 121 LEDLRDCSEIRIFRDHQRGCISV 143

BLAST of CsGy3G013630 vs. TrEMBL
Match: tr|A0A2P4J6D4|A0A2P4J6D4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_34520 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 114/139 (82.01%), Postives = 126/139 (90.65%), Query Frame = 0

Query: 1   MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKR 60
           MPGF +FP G CFDGCRDH QASGFGTRIWNLSDRPVELQIRVGSILKKVH+LKPG SKR
Sbjct: 20  MPGFSIFPFGGCFDGCRDHTQASGFGTRIWNLSDRPVELQIRVGSILKKVHTLKPGFSKR 79

Query: 61  LKCKSIYKAYMPGRS------MKSLLYYYDEACQPYVWIHESGGDSMRMVKQQYVSLEDL 120
           LKCKSIYKAYMPG+S      MKSLLYYYDE C PYVWI+++GGDS+RMVKQQY+SL+DL
Sbjct: 80  LKCKSIYKAYMPGKSGISNGGMKSLLYYYDETCHPYVWINDTGGDSLRMVKQQYISLDDL 139

Query: 121 REFSEIRIFRDHQRGCISV 134
           R++SEIR+FRDHQRGCISV
Sbjct: 140 RDYSEIRVFRDHQRGCISV 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011650993.12.3e-73100.00PREDICTED: uncharacterized protein LOC105434839 [Cucumis sativus] >KGN57027.1 hy... [more]
XP_008438723.13.0e-7399.25PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo][more]
XP_022936946.11.1e-7297.74uncharacterized protein LOC111443378 [Cucurbita moschata][more]
XP_023522910.11.5e-7296.99uncharacterized protein LOC111786960 [Cucurbita pepo subsp. pepo][more]
XP_022973671.11.2e-7196.24LOW QUALITY PROTEIN: uncharacterized protein LOC111472255 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G06145.11.5e-3958.46unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L8V0|A0A0A0L8V0_CUCSA1.5e-73100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150060 PE=4 SV=1[more]
tr|A0A1S3AWR3|A0A1S3AWR3_CUCME2.0e-7399.25uncharacterized protein LOC103483746 OS=Cucumis melo OX=3656 GN=LOC103483746 PE=... [more]
tr|A0A1R3IS40|A0A1R3IS40_9ROSI2.2e-6480.99Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21648 PE=4 SV=1[more]
tr|A0A1R3GAK7|A0A1R3GAK7_COCAP6.3e-6479.72Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27392 PE=4 ... [more]
tr|A0A2P4J6D4|A0A2P4J6D4_QUESU3.1e-6382.01Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_34520 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G013630.1CsGy3G013630.1mRNA


The following gene(s) are paralogous to this gene:

None