Carg17398 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGGGTTCGGTGTTTTCCCTCTTGGTAGCTGTTTCGATGGGTGCCGAGACCACGCTCAAGCGTCGGGATTCGGCACGCGTATATGGAACTTGAGCGACAGGCCGGTCGAGCTGCAGATAAGGGTAGGATCAATATTGAAAAAGGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGCATTTACAAAGCATATATGCCAGGAAGGAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATTTATCAGTCTTGAAGATTTGAGGGAGTTTTCTGAGATTAGAATCTTTCGGGATCATCAGCGCGGTTGCGTATCGGTTCGGAAGAAACCGAGGCTCGGTTTCTGCTGA ATGCCGGGGTTCGGTGTTTTCCCTCTTGGTAGCTGTTTCGATGGGTGCCGAGACCACGCTCAAGCGTCGGGATTCGGCACGCGTATATGGAACTTGAGCGACAGGCCGGTCGAGCTGCAGATAAGGGTAGGATCAATATTGAAAAAGGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGCATTTACAAAGCATATATGCCAGGAAGGAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATTTATCAGTCTTGAAGATTTGAGGGAGTTTTCTGAGATTAGAATCTTTCGGGATCATCAGCGCGGTTGCGTATCGGTTCGGAAGAAACCGAGGCTCGGTTTCTGCTGA ATGCCGGGGTTCGGTGTTTTCCCTCTTGGTAGCTGTTTCGATGGGTGCCGAGACCACGCTCAAGCGTCGGGATTCGGCACGCGTATATGGAACTTGAGCGACAGGCCGGTCGAGCTGCAGATAAGGGTAGGATCAATATTGAAAAAGGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGCATTTACAAAGCATATATGCCAGGAAGGAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATTTATCAGTCTTGAAGATTTGAGGGAGTTTTCTGAGATTAGAATCTTTCGGGATCATCAGCGCGGTTGCGTATCGGTTCGGAAGAAACCGAGGCTCGGTTTCTGCTGA MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
BLAST of Carg17398 vs. NCBI nr
Match: XP_022936946.1 (uncharacterized protein LOC111443378 [Cucurbita moschata]) HSP 1 Score: 304.7 bits (779), Expect = 1.7e-79 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Carg17398 vs. NCBI nr
Match: XP_023522910.1 (uncharacterized protein LOC111786960 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 304.3 bits (778), Expect = 2.2e-79 Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Carg17398 vs. NCBI nr
Match: XP_022973671.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111472255 [Cucurbita maxima]) HSP 1 Score: 301.2 bits (770), Expect = 1.8e-78 Identity = 140/142 (98.59%), Postives = 140/142 (98.59%), Query Frame = 0
BLAST of Carg17398 vs. NCBI nr
Match: XP_008438723.1 (PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo]) HSP 1 Score: 297.0 bits (759), Expect = 3.5e-77 Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 0
BLAST of Carg17398 vs. NCBI nr
Match: XP_011650993.1 (PREDICTED: uncharacterized protein LOC105434839 [Cucumis sativus] >KGN57027.1 hypothetical protein Csa_3G150060 [Cucumis sativus]) HSP 1 Score: 294.3 bits (752), Expect = 2.3e-76 Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0
BLAST of Carg17398 vs. TAIR10
Match: AT3G06145.1 (unknown protein) HSP 1 Score: 162.5 bits (410), Expect = 1.9e-40 Identity = 77/135 (57.04%), Postives = 101/135 (74.81%), Query Frame = 0
BLAST of Carg17398 vs. TrEMBL
Match: tr|A0A1S3AWR3|A0A1S3AWR3_CUCME (uncharacterized protein LOC103483746 OS=Cucumis melo OX=3656 GN=LOC103483746 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 2.3e-77 Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 0
BLAST of Carg17398 vs. TrEMBL
Match: tr|A0A0A0L8V0|A0A0A0L8V0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150060 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76 Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0
BLAST of Carg17398 vs. TrEMBL
Match: tr|A0A1R3IS40|A0A1R3IS40_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21648 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.5e-68 Identity = 121/151 (80.13%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of Carg17398 vs. TrEMBL
Match: tr|A0A1R3GAK7|A0A1R3GAK7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27392 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.7e-67 Identity = 119/152 (78.29%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of Carg17398 vs. TrEMBL
Match: tr|A0A061ET99|A0A061ET99_THECC (EF-hand calcium-binding domain-containing protein 4A OS=Theobroma cacao OX=3641 GN=TCM_020511 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 6.3e-67 Identity = 120/148 (81.08%), Postives = 130/148 (87.84%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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