CsGy2G003470 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G003470
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Acyl carrier protein
Location	Chr2 : 2329209 .. 2331503 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAAGGAACCCCGCAATCAAACACTACCTATTTAAGCTGTTGCAACTGCCACGAACTTGCTCGCTTTGCTTTCTCCGTCCCATTTTGCACTATCCGTTTTCCCTACTCCAAATTCTCTCTTCCCTTTGTCGATGGCTTCCATCACAGCTTCATCACTCTCTCTGCGATCTGCAGCTCCTCAATGGCGCCAAATCGCTGTAACTAATTTTCAATTCTCTCCTTTTCTTTTTCTTAACTGCATGCGTTTAGTGGATCTGTTGTACGATTACGTTGTTTTTTTTGTTCTTTCTGTATAGTCAATTGCCTCGGAACTGTTCTTAGTTTCAACCATTCTGATCTCCATTTTAGCGTCGTTTTCTCTCACATTGTCGTTAATTACGAAGTTTGGAGCATTGGCTTGAATCCGTGTTGTGATTGTATTTGCATGGCTATGAAACGTATGGATGATGGAGTTTGTATCACTTCTTTGATTTCAGAATGTTTCATATCTCTTAATTGTTTTGTTTCATGTACTAATTTGAATTTCTTCCCGAATTTTCACGGCTATTTGGGGCCGGAGGGGTAGAAGGGAATAGTTTTCGAATTACTTGCTTTCCCAGGGAGTAACAGGTCCAAAAAAGGCAACAGACCATAAATTACGAGCGATCTTGATTAATCCTTACGTATATAATCGTTTACCGTTTTAGTTATGATGATCAGTCAACTTGATGTCCTGAAAAATTATCTGCATGCTTTACTGAATATGTGTGTACTGTTAATTATCATTTGTTTATTGTTCTTTTTGAGTTTCTGACCTTATGAGACTATATAGGTCATATATGTTCTCTGATTAATTATCATTTTGGTGAACTGTTGAATTTCTTGGTAAGCAGGGAACATCCAAGCTTTCAGGTTCAAGGAGGGTTTCGTTTTCTTTCCAAGGGAGAAACAATTTCTCATCTAGAAGATTACAGTCGCTTCGAATTTCATGTGCTGTAAGTTTTTTTTCTGTTGCATGTAATTCTTAGAGAAAATGCCAATTACTAAGTATTGTTGCATTTTGACGTTTAATTGTGTGAACTATGAAACAGGCCAAGCCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGATTCCACTGTTAATGGCGAATCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTAAAGTACTTTACTGCGCATGTTTCATCAAATTTATCCTTTGCATGTCTTTTTACCATTTTTTTTATTTTATTTTAAGATTTTTTATACAAGAACAATATTCCTATAAAACACACACCAAAGCCCAACCTTTGTTTCTTCTTTTTTTTTTCAAGAATATTTTAATTTTTTTTTACATGAGTTGTGAGGAGTGATTGCACAAAGATGATGGAAGATGTCCAACCCATGATTAAAAAAAAAAAGCTCCCTTTGCATGCCCTTAACTATAGGAAAAAACTTGGGAGCAACCCTGCTACATCCAAATCAAATTAAAAGTTGCCCATGTGGTAGTTTGATTTTGTCATTTACAATAGTTCCCTTTATTTGTAAAACTACCACATTCAAATCAAATTAAAACTCCCTTTGTATTTATAAAGAACTCTAAGATTAATTCTTAATAATCCTTGACCTTCCAAATTTTCAAATAATATACATCATATATGTATGTGAGAACAGGTTGAGATTGTGATGGGACTTGAGGAAGAGTTTGGGATCAGTGTGGAAGAGGAGAGTGCACAAAGCATCACAACCGTTCAAGAGGCTGCAGATCTGATCGAGGATCTCATCCTAAAAAAAGGTGCTTAAAAATATTTCATCCACTGCATGCCTTCAAGAGGGGAGAGGGGTGAGCGAACACAAGTCTCCCCTTTTTACCATTTTGCTCTTCTGTTAGTTTATTTTACTTGTCATCTTGATTTGAAAGAGCTAGGCTCTATAGTCTTCAGTCTTTCTTTCACTCTCTCTCTTTAATCTGCTAATCATCAGTGTATTAGGTCTTAAAATAATGATATGAGACTTTTTGTTTCCAAGTTTTTTCTCCTTTCTAGATTCAATGGGTGAAGAATATATATTATATATATTATTCATAAGAAGGTCGAAGTTCAGAACCATCAGCTTTATTATTAAAAGGGGTGGATTCAAAAAAGTTGTTGATTCTTGTTCGTAGGATTAACATTGACATAGAACCTAATCGCGTTTGAATACATACATATTAATAGGGATGTATTCAGAAATGGGTTTTATACTTCTAAAAGTAACGTGAATATAATATAATTTTAC

mRNA sequence

GAAAAAAAGGAACCCCGCAATCAAACACTACCTATTTAAGCTGTTGCAACTGCCACGAACTTGCTCGCTTTGCTTTCTCCGTCCCATTTTGCACTATCCGTTTTCCCTACTCCAAATTCTCTCTTCCCTTTGTCGATGGCTTCCATCACAGCTTCATCACTCTCTCTGCGATCTGCAGCTCCTCAATGGCGCCAAATCGCTGGAACATCCAAGCTTTCAGGTTCAAGGAGGGTTTCGTTTTCTTTCCAAGGGAGAAACAATTTCTCATCTAGAAGATTACAGTCGCTTCGAATTTCATGTGCTGCCAAGCCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGATTCCACTGTTAATGGCGAATCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAGATTGTGATGGGACTTGAGGAAGAGTTTGGGATCAGTGTGGAAGAGGAGAGTGCACAAAGCATCACAACCGTTCAAGAGGCTGCAGATCTGATCGAGGATCTCATCCTAAAAAAAGGTGCTTAAAAATATTTCATCCACTGCATGCCTTCAAGAGGGGAGAGGGGTGAGCGAACACAAGTCTCCCCTTTTTACCATTTTGCTCTTCTGTTAGTTTATTTTACTTGTCATCTTGATTTGAAAGAGCTAGGCTCTATAGTCTTCAGTCTTTCTTTCACTCTCTCTCTTTAATCTGCTAATCATCAGTGTATTAGGTCTTAAAATAATGATATGAGACTTTTTGTTTCCAAGTTTTTTCTCCTTTCTAGATTCAATGGGTGAAGAATATATATTATATATATTATTCATAAGAAGGTCGAAGTTCAGAACCATCAGCTTTATTATTAAAAGGGGTGGATTCAAAAAAGTTGTTGATTCTTGTTCGTAGGATTAACATTGACATAGAACCTAATCGCGTTTGAATACATACATATTAATAGGGATGTATTCAGAAATGGGTTTTATACTTCTAAAAGTAACGTGAATATAATATAATTTTAC

Coding sequence (CDS)

ATGGCTTCCATCACAGCTTCATCACTCTCTCTGCGATCTGCAGCTCCTCAATGGCGCCAAATCGCTGGAACATCCAAGCTTTCAGGTTCAAGGAGGGTTTCGTTTTCTTTCCAAGGGAGAAACAATTTCTCATCTAGAAGATTACAGTCGCTTCGAATTTCATGTGCTGCCAAGCCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGATTCCACTGTTAATGGCGAATCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAGATTGTGATGGGACTTGAGGAAGAGTTTGGGATCAGTGTGGAAGAGGAGAGTGCACAAAGCATCACAACCGTTCAAGAGGCTGCAGATCTGATCGAGGATCTCATCCTAAAAAAAGGTGCTTAA

Protein sequence

MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSITTVQEAADLIEDLILKKGA

Homology

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BLAST of CsGy2G003470 vs. NCBI nr
Match: XP_004139206.1 (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus] >KGN60848.1 hypothetical protein Csa_2G013290 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE
Sbjct: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADLIEDLILKKGA 140
           TTVQEAADLIEDLILKKGA
Sbjct: 121 TTVQEAADLIEDLILKKGA 139

[Close]

BLAST of CsGy2G003470 vs. NCBI nr
Match: XP_008455529.1 (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 5.5e-59
Identity = 132/139 (94.96%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MASITASSLSLR+A P  RQIAGTSKLSGSR VSFS+QGRNNFSSRRLQSLRISCAAKPE
Sbjct: 1   MASITASSLSLRTAPPHCRQIAGTSKLSGSRMVSFSYQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADLIEDLILKKGA 140
           TTVQEAADLIEDLILKKGA
Sbjct: 121 TTVQEAADLIEDLILKKGA 139

[Close]

BLAST of CsGy2G003470 vs. NCBI nr
Match: XP_022946064.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 223.0 bits (567), Expect = 6.2e-55
Identity = 124/139 (89.21%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MASITASS  +RSAAPQ RQIA  SKLSGS+RVSFS+QGRNNFSSRRL+SL+ISCAAKPE
Sbjct: 1   MASITASSFCVRSAAPQSRQIAAVSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLAL DDS VNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSIVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADLIEDLILKKGA 140
           TTVQEAAD+IEDLILKKG+
Sbjct: 121 TTVQEAADMIEDLILKKGS 139

[Close]

BLAST of CsGy2G003470 vs. NCBI nr
Match: XP_023546824.1 (acyl carrier protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54
Identity = 124/139 (89.21%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MASITAS   +RSAAPQ RQIA  SKLSGS+RVSFS+QGRNNFSSRRL+SL+ISCAAKPE
Sbjct: 1   MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLAL DDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALADDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADLIEDLILKKGA 140
           TTVQEAAD+IEDLILKKG+
Sbjct: 121 TTVQEAADMIEDLILKKGS 139

[Close]

BLAST of CsGy2G003470 vs. NCBI nr
Match: XP_022965998.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53
Identity = 121/137 (88.32%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MAS++ASS  +RSAAP+ RQI+ T+KLSG +RVSFS QGRN FSSRRLQSL+ISCAAKPE
Sbjct: 1   MASVSASSFCVRSAAPRSRQISETAKLSGLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADLIEDLILKK 138
           TTVQEAAD+IEDLILKK
Sbjct: 121 TTVQEAADMIEDLILKK 137

[Close]

BLAST of CsGy2G003470 vs. TAIR10
Match: AT4G25050.2 (acyl carrier protein 4)

HSP 1 Score: 117.9 bits (294), Expect = 5.1e-27
Identity = 82/151 (54.30%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MAS++ +SLS ++ +    Q+    K S S+ V+F   GR   S++ L+ L+ISCAAK E
Sbjct: 1   MASLSTTSLSFKAPSTTISQV--LRKASSSQSVTF---GRFTSSTKSLR-LQISCAAKAE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDT------------VEIVMGLEEEF 120
           TV+KVS IVK+QLAL  D  +  ESKFS LGADSLDT            VEIVM LEE+F
Sbjct: 61  TVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKF 120

Query: 121 GISVEEESAQSITTVQEAADLIEDLILKKGA 140
            ISVEE  AQ+ITT+QEAADLIEDL+ KK A
Sbjct: 121 NISVEESDAQNITTIQEAADLIEDLVQKKPA 145

[Close]

BLAST of CsGy2G003470 vs. TAIR10
Match: AT3G05020.1 (acyl carrier protein 1)

HSP 1 Score: 112.1 bits (279), Expect = 2.8e-25
Identity = 72/139 (51.80%), Postives = 97/139 (69.78%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIA--GTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAK 60
           MA+  ++S+SL+++     +I+    + +S   + + SF  R +  SRRL    +SCAAK
Sbjct: 1   MATQFSASVSLQTSCLATTRISFQKPALISNHGKTNLSFNLRRSIPSRRLS---VSCAAK 60

Query: 61  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
            ET+EKVS IVKKQL+L  D  V  E+KF+ LGADSLDTVEIVMGLEEEF I + EE AQ
Sbjct: 61  QETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQ 120

Query: 121 SITTVQEAADLIEDLILKK 138
            I TV++AA+LIE+LI +K
Sbjct: 121 KIATVEQAAELIEELINEK 136

[Close]

BLAST of CsGy2G003470 vs. TAIR10
Match: AT1G54580.1 (acyl carrier protein 2)

HSP 1 Score: 111.7 bits (278), Expect = 3.7e-25
Identity = 73/140 (52.14%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGT--SKLSGSRRVSFSFQGRNNFSSRRLQS-LRISCAA 60
           MASI AS+     A P+   IA +     S  RR S S      F+ R+L + L +SCAA
Sbjct: 1   MASIAASASISLQARPRQLAIAASQVKSFSNGRRSSLS------FNLRQLPTRLTVSCAA 60

Query: 61  KPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESA 120
           KPETV+KV  +V+KQL+L +   +   +KF+ LGADSLDTVEIVMGLEEEFGI + EE A
Sbjct: 61  KPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKA 120

Query: 121 QSITTVQEAADLIEDLILKK 138
           QSI TV++AA LIE+L+ +K
Sbjct: 121 QSIATVEQAAALIEELLFEK 134

[Close]

BLAST of CsGy2G003470 vs. TAIR10
Match: AT1G54630.1 (acyl carrier protein 3)

HSP 1 Score: 111.7 bits (278), Expect = 3.7e-25
Identity = 74/141 (52.48%), Postives = 101/141 (71.63%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRV-SFSFQGRNN--FSSRRLQS-LRISCA 60
           MASI  S+ +   A P  RQ+     + G+++V SFS+  R+N  F+ R+L + L + CA
Sbjct: 1   MASIATSASTSLQARP--RQL-----VIGAKQVKSFSYGSRSNLSFNLRQLPTRLTVYCA 60

Query: 61  AKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEES 120
           AKPETV+KV  +V+KQL+L +   +   +KF+ LGADSLDTVEIVMGLEEEFGI + EE 
Sbjct: 61  AKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEK 120

Query: 121 AQSITTVQEAADLIEDLILKK 138
           AQSI TV++AA LIE+L+L+K
Sbjct: 121 AQSIATVEQAAALIEELLLEK 134

[Close]

BLAST of CsGy2G003470 vs. TAIR10
Match: AT5G27200.1 (acyl carrier protein 5)

HSP 1 Score: 111.3 bits (277), Expect = 4.8e-25
Identity = 75/144 (52.08%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVS-FSFQGRNN--FSSRRLQSLR--ISC 60
           MA+   SS+S+++        A T++   +++ + F+ +  NN  FS RRL   R  +SC
Sbjct: 1   MATSFCSSISMQAPFS-----ATTTRFCLNKQATIFNNEKTNNLSFSLRRLMPARLAVSC 60

Query: 61  AAKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEE 120
           A K ETVEKVS+IVKKQL+L DD  V   +KF+ LGADSLDTVEIVMGLEEEFGI++ EE
Sbjct: 61  AVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEE 120

Query: 121 SAQSITTVQEAADLIEDLILKKGA 140
            A+ I TVQ+AA+LIE+L+ +K A
Sbjct: 121 RAKEIATVQQAAELIEELVQEKTA 139

[Close]

BLAST of CsGy2G003470 vs. Swiss-Prot
Match: sp|P93092|ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-34
Identity = 90/139 (64.75%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLR--ISCAAK 60
           MAS+T +S+S+ S    ++     S++S  R VS   +G+ +F+  R++S R  + CAAK
Sbjct: 1   MASVTGTSISMAS----FKASLAPSRVSNLRSVSLPIKGK-SFAPLRMRSARFVVCCAAK 60

Query: 61  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
           PETVEKV  IVKKQLALPDDS V GESKF+TLGADSLDTVEIVMGLEEEFGI+VEEESAQ
Sbjct: 61  PETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEESAQ 120

Query: 121 SITTVQEAADLIEDLILKK 138
           SI TVQ+AADLIE LI KK
Sbjct: 121 SIATVQDAADLIEKLIEKK 134

[Close]

BLAST of CsGy2G003470 vs. Swiss-Prot
Match: sp|P52412|ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-32
Identity = 86/133 (64.66%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 6   ASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPETVEKV 65
           ASS+ ++SA+          ++S  R VS     ++ FS R   SLR++C AKPETV KV
Sbjct: 7   ASSICIKSAS---CSALAPGRISSLRSVSLPVSRKSFFSRRGSFSLRVNCQAKPETVTKV 66

Query: 66  SKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSITTVQE 125
             IVKKQLALPDDS V+G SKFS LGADSLDTVEIVMGLEEEFGISVEEESAQSI TVQ+
Sbjct: 67  CNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQD 126

Query: 126 AADLIEDLILKKG 139
           AADLIE L+ KKG
Sbjct: 127 AADLIEKLMEKKG 136

[Close]

BLAST of CsGy2G003470 vs. Swiss-Prot
Match: sp|P52411|ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-31
Identity = 90/141 (63.83%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 2   ASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNF----SSRRLQSLRISCAA 61
           ASI   S S    AP         ++S  R VS     R +F    SS+   +LR+SC A
Sbjct: 8   ASICIKSASFSPLAP--------GRISSLRSVSLPV-SRKSFPSLKSSKSSFALRVSCQA 67

Query: 62  KPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESA 121
           KPETV KV  IVKKQLALPDDS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEESA
Sbjct: 68  KPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESA 127

Query: 122 QSITTVQEAADLIEDLILKKG 139
           QSI TVQ+AADLIE L+ KKG
Sbjct: 128 QSIQTVQDAADLIEKLMEKKG 139

[Close]

BLAST of CsGy2G003470 vs. Swiss-Prot
Match: sp|P52414|ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.6e-31
Identity = 89/140 (63.57%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 2   ASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQS---LRISCAAK 61
           ASI   S S    AP         ++S  R VS     R +F S R       R+SC AK
Sbjct: 8   ASICIKSASCSPLAP--------GRISSLRSVSLPV-SRKSFPSLRSSKGSFARVSCQAK 67

Query: 62  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 121
           PETV KV +IVKKQLALPDDS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEESAQ
Sbjct: 68  PETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQ 127

Query: 122 SITTVQEAADLIEDLILKKG 139
           SI TVQ+AADLIE L+ KKG
Sbjct: 128 SIQTVQDAADLIEKLMEKKG 138

[Close]

BLAST of CsGy2G003470 vs. Swiss-Prot
Match: sp|P52413|ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-29
Identity = 83/139 (59.71%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 2   ASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGR---NNFSSRRLQSLRISCAAK 61
           A+  +S + ++SA+    +    S LS  R VS    G+   +  SSR   S R+ C AK
Sbjct: 4   AAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAK 63

Query: 62  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 121
            ETV +V +IVKKQLALP+DS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEESAQ
Sbjct: 64  QETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQ 123

Query: 122 SITTVQEAADLIEDLILKK 138
           SI TVQ+AADLIE L+  K
Sbjct: 124 SIQTVQDAADLIEKLVGNK 142

[Close]

BLAST of CsGy2G003470 vs. TrEMBL
Match: tr|A0A0A0LG91|A0A0A0LG91_CUCSA (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_2G013290 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE
Sbjct: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADLIEDLILKKGA 140
           TTVQEAADLIEDLILKKGA
Sbjct: 121 TTVQEAADLIEDLILKKGA 139

[Close]

BLAST of CsGy2G003470 vs. TrEMBL
Match: tr|A0A1S3C143|A0A1S3C143_CUCME (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103495677 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59
Identity = 132/139 (94.96%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60
           MASITASSLSLR+A P  RQIAGTSKLSGSR VSFS+QGRNNFSSRRLQSLRISCAAKPE
Sbjct: 1   MASITASSLSLRTAPPHCRQIAGTSKLSGSRMVSFSYQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADLIEDLILKKGA 140
           TTVQEAADLIEDLILKKGA
Sbjct: 121 TTVQEAADLIEDLILKKGA 139

[Close]

BLAST of CsGy2G003470 vs. TrEMBL
Match: tr|A0A2N9GNE7|A0A2N9GNE7_FAGSY (Acyl carrier protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31869 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.0e-34
Identity = 93/141 (65.96%), Postives = 112/141 (79.43%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQ--SLRISCAAK 60
           MAS+T +S+S+ S       +A ++K+S  + VSF   G+ +F++ R+Q    R+SCAAK
Sbjct: 1   MASVTGTSISMVSFK---ASLAPSNKISNLKSVSFPINGK-SFTTLRMQPARFRVSCAAK 60

Query: 61  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
           PETV KV +IVKKQLALPDDS V+GESKF+ LGADSLDTVEIVMGLEEEFGISVEEESAQ
Sbjct: 61  PETVTKVCEIVKKQLALPDDSAVSGESKFAALGADSLDTVEIVMGLEEEFGISVEEESAQ 120

Query: 121 SITTVQEAADLIEDLILKKGA 140
           SI TVQ+AADLIE LI KKGA
Sbjct: 121 SIATVQDAADLIEKLIEKKGA 137

[Close]

BLAST of CsGy2G003470 vs. TrEMBL
Match: tr|A0A2P5E447|A0A2P5E447_PARAD (Acyl carrier protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_007300 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34
Identity = 89/142 (62.68%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQ-IAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLR--ISCAA 60
           MAS+T +S+S+ S +  ++  +A +S++S    +SFS  G + F S RLQ +R  +SC A
Sbjct: 1   MASVTGASVSMTSLSSSFKPCLALSSRISNGNSISFSING-SRFPSLRLQPMRRQVSCKA 60

Query: 61  KPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESA 120
           KPETVEKV ++VKKQLALP DST+NGESKFS LGADSLDTVEIVMGLEE FGI+VEEE+A
Sbjct: 61  KPETVEKVCEVVKKQLALPADSTINGESKFSALGADSLDTVEIVMGLEETFGITVEEENA 120

Query: 121 QSITTVQEAADLIEDLILKKGA 140
           Q+I TVQ+AADLIE L+  KGA
Sbjct: 121 QTIATVQDAADLIESLVENKGA 141

[Close]

BLAST of CsGy2G003470 vs. TrEMBL
Match: tr|A0A2I4G9P3|A0A2I4G9P3_9ROSI (Acyl carrier protein OS=Juglans regia OX=51240 GN=LOC109005942 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.0e-34
Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLR--ISCAAK 60
           MAS+T +S+S+ S   +   +A +S++   + VSF    R +F+  RLQ LR  ISCAAK
Sbjct: 1   MASVTGTSISMTSF--KAASLAPSSRICNLKSVSFPV-NRKSFTPLRLQPLRFHISCAAK 60

Query: 61  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
           PETV KV +IVKKQLALPDDS V+GESKFS LGADSLDTVEIVMGLEEEFGISVEEESAQ
Sbjct: 61  PETVTKVCQIVKKQLALPDDSAVSGESKFSALGADSLDTVEIVMGLEEEFGISVEEESAQ 120

Query: 121 SITTVQEAADLIEDLILKKGA 140
           SI TVQ+AADLIE LI  KGA
Sbjct: 121 SIATVQDAADLIEKLIENKGA 138

The following BLAST results are available for this feature:

BLAST of CsGy2G003470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139206.1	2.1e-63	100.00	PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus] >KGN60848.1 h...	[more]
XP_008455529.1	5.5e-59	94.96	PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis melo]	[more]
XP_022946064.1	6.2e-55	89.21	acyl carrier protein 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023546824.1	1.1e-54	89.21	acyl carrier protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022965998.1	2.6e-53	88.32	acyl carrier protein 1, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CsGy2G003470 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25050.2	5.1e-27	54.30	acyl carrier protein 4	[more]
AT3G05020.1	2.8e-25	51.80	acyl carrier protein 1	[more]
AT1G54580.1	3.7e-25	52.14	acyl carrier protein 2	[more]
AT1G54630.1	3.7e-25	52.48	acyl carrier protein 3	[more]
AT5G27200.1	4.8e-25	52.08	acyl carrier protein 5	[more]

BLAST of CsGy2G003470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P93092\|ACP1_CASGL	1.4e-34	64.75	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
sp\|P52412\|ACP2_CUPLA	1.0e-32	64.66	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]
sp\|P52411\|ACP1_CUPLA	5.6e-31	63.83	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
sp\|P52414\|ACP4_CUPLA	9.6e-31	63.57	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]
sp\|P52413\|ACP3_CUPLA	5.2e-29	59.71	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=...	[more]

BLAST of CsGy2G003470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LG91\|A0A0A0LG91_CUCSA	1.4e-63	100.00	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_2G013290 PE=3 SV=1	[more]
tr\|A0A1S3C143\|A0A1S3C143_CUCME	3.6e-59	94.96	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103495677 PE=3 SV=1	[more]
tr\|A0A2N9GNE7\|A0A2N9GNE7_FAGSY	4.0e-34	65.96	Acyl carrier protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31869 PE=3 SV=1	[more]
tr\|A0A2P5E447\|A0A2P5E447_PARAD	6.9e-34	62.68	Acyl carrier protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_007300 PE=3 ...	[more]
tr\|A0A2I4G9P3\|A0A2I4G9P3_9ROSI	9.0e-34	67.38	Acyl carrier protein OS=Juglans regia OX=51240 GN=LOC109005942 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0031177	phosphopantetheine binding

Vocabulary: **INTERPRO**
Term	Definition
IPR006162	Ppantetheine_attach_site
IPR036736	ACP-like_sf
IPR003231	Acyl_carrier
IPR009081	PP-bd_ACP
IPR020806	PKS_PP-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0031177	phosphopantetheine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003470.1	CsGy2G003470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 62..134 e-value: 0.0069 score: 18.4
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 64..130 e-value: 1.4E-10 score: 41.3
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 59..134 score: 22.197
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 60..132 e-value: 3.1E-24 score: 82.7
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 91..132 e-value: 1.0E-7 score: 129.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 60..134 score: 17.051
IPR036736	ACP-like superfamily	GENE3D	G3DSA:1.10.1200.10		coord: 57..137 e-value: 1.5E-23 score: 84.8
IPR036736	ACP-like superfamily	SUPERFAMILY	SSF47336	ACP-like	coord: 59..134
None	No IPR available	PANTHER	PTHR20863:SF29	ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..137
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 1..137
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 89..104

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G003470	Cla019842	Watermelon (97103) v1	cgybwmB140
CsGy2G003470	Csa2G013290	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G003470	MELO3C004338	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G003470	ClCG02G016240	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G003470	CSPI02G03370	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G003470	CmaCh12G010950	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G003470	CmaCh05G011710	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G003470	CmoCh05G011960	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G003470	CmoCh12G011120	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G003470	Lsi11G004850	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G003470	Cp4.1LG07g09400	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G003470	Cp4.1LG11g09500	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G003470	MELO3C004338.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G003470	CsaV3_2G004530	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G003470	Cla97C02G042070	Watermelon (97103) v2	cgybwmbB114
CsGy2G003470	Bhi06G001482	Wax gourd	cgybwgoB133
CsGy2G003470	Carg23422	Silver-seed gourd	carcgybB0310

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G003470	Silver-seed gourd	carcgybB0713