Cp4.1LG07g09400 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCATCCGATTGCGCATTTTGTCCGTATTGTTCCTTCATTTTTTCCTCCAAAAAATAAATAAAAAGAGCCCCAATCAAACCACCTATTTAAGCTCTTCAACGACTACCAACTTGCTCGCATTGATTTCTCCGTTCCATTTCCACTCTTCGCCACTCCAAATTCTCTCTATTTTTCATCGATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGTAAATTTTCGATTCCTCTTCTGTTTGTCACTTTATGTTTAAGGATCTGTTGAACGATTTCATTTTTGCTCTGTTCTCGTTCTTTCTGTATGATTAACTGCTTTGGAACTTGTTTTCTTGATTCCAATCCTTTTTATCTCGATTTTTGCGTTGATTAGTGTCGTTAATTACGAAGTTTGAAGCATTGGTTTGAATCGGTGCTGTGGTTGTATTGCATGGCTGTGAAATGCATGGATGATGGACTTAGCGTTCCCTCTTTGTTTCGAAATGTTTTATGTCTATTTCTTTTGGTGTTTTACCTTCATTTGTGTTATTTCAATACTGATTTGAATTTCTTGCCTAATTTTTCCGGCTATTTGGGACCTGTATGCTGAAGGGAATCGTTCTGAACCATGTTCAGAGAAATTAGCATTTTCTGTTAGAAAATTGAGTCCAGCTGACCTTAATTCTCTCTCGTTAATTGTGTCCTCAAAAATTTGAAGCGCAAAAGAAAACCATTAGTTACAAGCTGATCTTGAAATCCTTGCATGTATTTTGTTTACGACTCTAGTTATGAGTCAACTTGAAGTCATTATGTCCTGAAAATTCTGTGTGCGTCTATTAATTATAATTCTTCTATTGTTCTTTTTGAACTCTCTCTGTTAAGAACTTGTGTTATACTATCATATATGCTCTGCTGATCATTTTGGTGATGATCATGTTGTTTCTTGGTAAGCAGGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCATGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGTAAGTCTATACTTCTTTTTACTGAGGCTGTCAGTGCAAACGCAAATTGCTGTTGTTTTATGATGTTAACTGTTTGGAACAGGCCAAACCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTAAACTCATACAATACCTTGCTCACCATGTTTCATAGAAGTTTTCCTTTGAACATCTTTACCATAATTAATTTGAAACTTTTTGAAATTCTAATTAAGACCCTCGATTAATTTGATTATGGGATATCTTATGGGATCATCTCCAACGTGTCTGTTCTTGTCTTCTTGCTTGTGAGCATTTTTGGTAAAACACGACCGCCATTTTTAACATTTGGGAAGATATGTATGAATAGCTGTTCTTGAAGTTGGTTTTTTCTTCCATTAATTTATTTTTACATATAACCCATATAAAAAGAAAATGATTGATAGTCATTTTACTTATGAATACTGATTTTTCTACCATCGTCATGTGTTGTCCTAATGATTAACAAAAACAAATGAACTTAGGGAATGGATTTAAACCATAGTGACTAATTACCTAAAACTTCTTTTTCATCTCTATCTTTGAGAAAAGAAAGATTCTCCCTTTTGTGATTCTTATTCTTTTGTTCTTCCCTTCATTACAAAAATGCCCATGATTTGATTATTGTTTCATATACTCAATTTTCCATGAAAAATAATTTAGGATGAGTAAAATCATGAAAATTTTAGTTCGAGCTAGATCTTAAATGTGATGTCCCACATTGGTTGGGGAGGAGGAGAACAAAACACCCCGTTTTAAAGCCTTGATGGGAAGCCGTTGCTAGCGGTGGATCTAGGCCGTTACATTAAAGTTTTGAATGCTGTATTTGACATGCAATGCAATGTATAACATATATGTGTATATATGTGAGATTCAGGTTGAAATCGTGATGGGACTCGAGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACGACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCCTCAAAAAGAGTGGTTAAAAATCTGATTGCCACGAGGGAGGGAGGGTGAGCAAAAAACTCAGTCTCCTTTTTGCTCCCAAGTCTTCTCTTTTTTGTCTAGATTTTAACGCTAATCAATGTATTAGGTCTTAAAATAATGATAATAATAAATTCACTACACTTTGTTTCCTAATCTTCTCTTTTCCAAAAATTTTCCGTTCCATACTTGGTAATTCTTTTGTTATCTATCAC ATCATCCGATTGCGCATTTTGTCCGTATTGTTCCTTCATTTTTTCCTCCAAAAAATAAATAAAAAGAGCCCCAATCAAACCACCTATTTAAGCTCTTCAACGACTACCAACTTGCTCGCATTGATTTCTCCGTTCCATTTCCACTCTTCGCCACTCCAAATTCTCTCTATTTTTCATCGATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCATGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGCCAAACCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAAATCGTGATGGGACTCGAGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACGACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCCTCAAAAAGAGTGGTTAAAAATCTGATTGCCACGAGGGAGGGAGGGTGAGCAAAAAACTCAGTCTCCTTTTTGCTCCCAAGTCTTCTCTTTTTTGTCTAGATTTTAACGCTAATCAATGTATTAGGTCTTAAAATAATGATAATAATAAATTCACTACACTTTGTTTCCTAATCTTCTCTTTTCCAAAAATTTTCCGTTCCATACTTGGTAATTCTTTTGTTATCTATCAC ATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCATGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGCCAAACCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAAATCGTGATGGGACTCGAGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACGACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCCTCAAAAAGAGTGGTTAA MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHHGRNTFSSRRLQSLQISCAAKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKSG
BLAST of Cp4.1LG07g09400 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 5.9e-33 Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 7.7e-33 Identity = 89/138 (64.49%), Postives = 104/138 (75.36%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30 Identity = 90/142 (63.38%), Postives = 105/142 (73.94%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.6e-30 Identity = 89/141 (63.12%), Postives = 103/141 (73.05%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 4.7e-30 Identity = 83/139 (59.71%), Postives = 100/139 (71.94%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TrEMBL
Match: A0A0A0LG91_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_2G013290 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.8e-52 Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TrEMBL
Match: M5W1R0_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013030mg PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.7e-34 Identity = 91/140 (65.00%), Postives = 108/140 (77.14%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TrEMBL
Match: A0A068CBK1_OLEEU (Acyl carrier protein OS=Olea europaea GN=ACP2 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.0e-32 Identity = 91/140 (65.00%), Postives = 112/140 (80.00%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TrEMBL
Match: Q944N0_OLEEU (Acyl carrier protein OS=Olea europaea GN=ACP PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.7e-32 Identity = 91/140 (65.00%), Postives = 111/140 (79.29%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TrEMBL
Match: A5BLR3_VITVI (Acyl carrier protein OS=Vitis vinifera GN=VIT_14s0030g00740 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 7.7e-32 Identity = 86/137 (62.77%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4) HSP 1 Score: 115.5 bits (288), Expect = 2.5e-26 Identity = 81/149 (54.36%), Postives = 100/149 (67.11%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2) HSP 1 Score: 111.3 bits (277), Expect = 4.8e-25 Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5) HSP 1 Score: 110.5 bits (275), Expect = 8.2e-25 Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1) HSP 1 Score: 110.5 bits (275), Expect = 8.2e-25 Identity = 71/141 (50.35%), Postives = 91/141 (64.54%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3) HSP 1 Score: 109.0 bits (271), Expect = 2.4e-24 Identity = 67/139 (48.20%), Postives = 93/139 (66.91%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. NCBI nr
Match: gi|449442875|ref|XP_004139206.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus]) HSP 1 Score: 213.4 bits (542), Expect = 2.5e-52 Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. NCBI nr
Match: gi|659070522|ref|XP_008455529.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 8.2e-51 Identity = 116/137 (84.67%), Postives = 126/137 (91.97%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. NCBI nr
Match: gi|645222390|ref|XP_008218144.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Prunus mume]) HSP 1 Score: 156.0 bits (393), Expect = 4.8e-35 Identity = 93/140 (66.43%), Postives = 109/140 (77.86%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. NCBI nr
Match: gi|595830628|ref|XP_007206112.1| (hypothetical protein PRUPE_ppa013030mg [Prunus persica]) HSP 1 Score: 152.5 bits (384), Expect = 5.3e-34 Identity = 91/140 (65.00%), Postives = 108/140 (77.14%), Query Frame = 1
BLAST of Cp4.1LG07g09400 vs. NCBI nr
Match: gi|1009117422|ref|XP_015875309.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 149.8 bits (377), Expect = 3.5e-33 Identity = 90/139 (64.75%), Postives = 111/139 (79.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|