CmoCh12G011120 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G011120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Acyl carrier protein
Location	Cmo_Chr12 : 10161180 .. 10163848 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAACTTGCTTGCATTGATTTCTCCGTTCCATTTCCACTCTTCGCCACTCCAAATTCTCTCTATTTTTCATCGATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGTAAATTTTCGATTCCTCTTCTGTTTGTAACTTTATGTTTAAGGATCTGTTGAACGATTTCATTTTTGCTCTGTTCTCGTTCTTTCCGTATGATCAACTGCCTTGGAACTCGTTTTCTTGATTCCAATCCTTTTTATCTCGATTTTTGCGTTGATTAGTGTCGTTAATTACGAAGTTTGAAGCATTGGTTTGAATCGGTGCTGTGGTTGTATTGCATGGCTGTGAAATGCATGGATGATGGACTTGGCGTTCCCTCTTTTGTTTCAGAATGTTTGATATCTATTTATTTTCGTGTTTTACATTCATTTGTGTTATTTCAATACTGATTTGAATTTCTTACCTAATTTTTCCGGCTATTTGGAACCTGTATGCTGAAGGGAATCGTTCTGAACCATGTTCAGAGAAATTGCATTTTCTGTTAGAAAATTGAGTCCAGCTGACCTTAATTCTCTCTCGTTTTTGTGTCCTAAAAAATTTGAAGCGCAAAAGAAAACCATTAGTTATAAGCTGATCTTGAAATCCTTGCATGTATTCTGTTTACGGCTCTAGTTATGAGTCAACTTGAAGTCATTATGTCCTGAAAATTCTGTGTGCGTGTAATAATTATAATTCTTCTATTGTTCTTTTTGAACTCTCTCTGTTAAGAACTTGTGTTATACTATCAATATTCTCTGCTGATCATTTTGGTGATAATCATGTTGTTTCTTGGTAAGCAGGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCAAGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGTAAGTCTATACTTCTTTTTGCTGAGGCTATCAGTGCAAACGCAAATTGCTGTTGTTTTATGATGTTAACTGTTTGGAACAGGCCAAACCAGAGACAGTTGAAAAGGTGAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTAAACTCATACAATACCTTGCTCACCATGTTTCATAGAAGTTTTCCTTTGAACATCTTTACCATAATTAATTTGAAACTTTTTGAAATTCTAATTAAGACCCTCGATTAATTTGATTATGGGATATCTTATGGGATCATCTCCAACGTATCTGTTCTTGTCTTCTTGCTTGTGAGCGTTCTTGGTAAAACACGACTGCCATTTTTAACATTTGGGAATATATGTATGAATAGCTGTTCTTGAAGTTGGTTTTTTCTTCCATTAATTTATTTTTACATATAACCCATATTAAAAAAAAAGGATTGATTGTCATTTTACTTATGAATACTGATTTTTCTACCATCGTCATGTGTTGTCCTAATGATTAACAAAAACAAATGAACTTAGGGAATGGATTTAAGCCATAGTGACTAATTACCTAAAACTTCTTTTTCATCTCTATCTTTGAGAAAAGAAAGATTCTCCCTTTTGTGATTCTTATTCTTTTGTTCTTCCCTTCATTAAAAAAATGCCCATGAATTGATTATTGTTTCATATACTCAATTTTCCATGAAAAATAATTTAGGACAAGTAAAATCATGAAAATTTTAGTTCAAGCTAGATCTTAAATGTGATGTCCTACATTGGTTGCGGAGGAGAACAAAACACCCTTTATATGGATGTGGAAACATTCCCCAAGTAGACGCGTTTTAAAGCCTTGATGGGAAGCCGTTGCTAGCGGTGGATCTAGGCCGTTACATTAAAGTTTTGAATACTGTATTTGACATGCAATACAATGTAACATATATGTGTATATATGTGAGATTCAGGTTGAAATCGTGATGGGACTCGAGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACAACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCTTCAAAAAGAGTGGTTAAAAATCTCATTGCCACGAGGGAGGGAGGGTGAGCAAAAAACTCAGTCTCCTTTTTTCTCCCAAGTCTTCTCTTTTTTGTCTAGATTTTAACGCTAATCAATGTATTAGGTCTTAAAATAATGATAATAATAAATTCACTAGACTTTGTTTCCTGATCTTCTCTTTTCCAAAAATTTTCCGTTCCATACTTGGTAATTCTTTTGTTATCTATCGCAGGGTCGTAGCTAGCTTTCGCGCGACGCCGAAACGCTAGCTTTCGCGCGAAATTTTCCGTTCTTCTCTTTTCACTAGACTTTGTTTCCTAATCTTCTATTTTCCAAAAATTTTCCGTTCCATACTTGGTAATTTTTTTGTTATCTATCACAGGGTCGTAGCTAGCTTTCGCGCGACGCCGAACGCTAGTGTTGGATGAAAGTGTCCCACATTGGTTAATTTAGGGAATGGTCATGGTTTATAATCTAAGAATACACTCTCTATTGGTGTGAGGCGAGGCCTTTTGGGGAAGCTCAAACGGAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCG

mRNA sequence

CCAACTTGCTTGCATTGATTTCTCCGTTCCATTTCCACTCTTCGCCACTCCAAATTCTCTCTATTTTTCATCGATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCAAGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGCCAAACCAGAGACAGTTGAAAAGGTGAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAAATCGTGATGGGACTCGAGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACAACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCTTCAAAAAGAGTGGTTAAAAATCTCATTGCCACGAGGGAGGGAGGGTGAGCAAAAAACTCAGTCTCCTTTTTTCTCCCAAGTCTTCTCTTTTTTGTCTAGATTTTAACGCTAATCAATGTATTAGGTCTTAAAATAATGATAATAATAAATTCACTAGACTTTGTTTCCTGATCTTCTCTTTTCCAAAAATTTTCCGTTCCATACTTGGTAATTCTTTTGTTATCTATCGCAGGGTCGTAGCTAGCTTTCGCGCGACGCCGAAACGCTAGCTTTCGCGCGAAATTTTCCGTTCTTCTCTTTTCACTAGACTTTGTTTCCTAATCTTCTATTTTCCAAAAATTTTCCGTTCCATACTTGGTAATTTTTTTGTTATCTATCACAGGGTCGTAGCTAGCTTTCGCGCGACGCCGAACGCTAGTGTTGGATGAAAGTGTCCCACATTGGTTAATTTAGGGAATGGTCATGGTTTATAATCTAAGAATACACTCTCTATTGGTGTGAGGCGAGGCCTTTTGGGGAAGCTCAAACGGAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCG

Coding sequence (CDS)

ATGGCTTCTGTCTCAGCTTCATCATTCTGCGTGCGATCTGCAGCTCCTCGATCGCGCCAAATCTCTGAAACATCCAAGCTTTCTAGTTTGAAGAGGGTCTCATTTTCTCACCAAGGGAGAAATACATTCTCTTCCAGAAGATTACAGTCGCTTCAAATTTCATGTGCTGCCAAACCAGAGACAGTTGAAAAGGTGAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGACTCCACTGTTAATGGAGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAAATCGTGATGGGACTCGAGGAAGAATTTGGGATAAGCGTGGAAGAAGAGAGCGCACAGAGCATCACAACCGTTCAAGAGGCTGCAGACATGATCGAGGATCTCATCTTCAAAAAGAGTGGTTAA

Homology

[Close]

BLAST of CmoCh12G011120 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.5e-33
Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQ--ISCAAK 60
           MASV+ +S  + S     +     S++S+L+ VS   +G++ F+  R++S +  + CAAK
Sbjct: 1   MASVTGTSISMASF----KASLAPSRVSNLRSVSLPIKGKS-FAPLRMRSARFVVCCAAK 60

Query: 61  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
           PETVEKV  IVKKQLALPDDS V GESKF+TLGADSLDTVEIVMGLEEEFGI+VEEESAQ
Sbjct: 61  PETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEESAQ 120

Query: 121 SITTVQEAADMIEDLIFKKSG 140
           SI TVQ+AAD+IE LI KKSG
Sbjct: 121 SIATVQDAADLIEKLIEKKSG 136

[Close]

BLAST of CmoCh12G011120 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.9e-33
Identity = 89/138 (64.49%), Postives = 104/138 (75.36%), Query Frame = 1


Query: 1   MASVS-ASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKP 60
           MAS + ASS C++SA   S       ++SSL+ VS     ++ FS R   SL+++C AKP
Sbjct: 1   MASAAPASSICIKSA---SCSALAPGRISSLRSVSLPVSRKSFFSRRGSFSLRVNCQAKP 60

Query: 61  ETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQS 120
           ETV KV  IVKKQLALPDDS V+G SKFS LGADSLDTVEIVMGLEEEFGISVEEESAQS
Sbjct: 61  ETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQS 120

Query: 121 ITTVQEAADMIEDLIFKK 138
           I TVQ+AAD+IE L+ KK
Sbjct: 121 IQTVQDAADLIEKLMEKK 135

[Close]

BLAST of CmoCh12G011120 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.4e-31
Identity = 90/142 (63.38%), Postives = 105/142 (73.94%), Query Frame = 1


Query: 1   MASVSA-SSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTF----SSRRLQSLQISC 60
           MAS +A +S C++SA   S       ++SSL+ VS     R +F    SS+   +L++SC
Sbjct: 1   MASAAAGASICIKSA---SFSPLAPGRISSLRSVSLP-VSRKSFPSLKSSKSSFALRVSC 60

Query: 61  AAKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEE 120
            AKPETV KV  IVKKQLALPDDS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEE
Sbjct: 61  QAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEE 120

Query: 121 SAQSITTVQEAADMIEDLIFKK 138
           SAQSI TVQ+AAD+IE L+ KK
Sbjct: 121 SAQSIQTVQDAADLIEKLMEKK 138

[Close]

BLAST of CmoCh12G011120 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30
Identity = 89/141 (63.12%), Postives = 103/141 (73.05%), Query Frame = 1


Query: 1   MASVSA-SSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQS---LQISCA 60
           MAS +A +S C++SA   S       ++SSL+ VS     R +F S R       ++SC 
Sbjct: 1   MASAAAGASICIKSA---SCSPLAPGRISSLRSVSLP-VSRKSFPSLRSSKGSFARVSCQ 60

Query: 61  AKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEES 120
           AKPETV KV +IVKKQLALPDDS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEES
Sbjct: 61  AKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEES 120

Query: 121 AQSITTVQEAADMIEDLIFKK 138
           AQSI TVQ+AAD+IE L+ KK
Sbjct: 121 AQSIQTVQDAADLIEKLMEKK 137

[Close]

BLAST of CmoCh12G011120 vs. Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.7e-30
Identity = 83/139 (59.71%), Postives = 100/139 (71.94%), Query Frame = 1


Query: 2   ASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGR---NTFSSRRLQSLQISCAAK 61
           A+  +S  C++SA+    +    S LSSL+ VS    G+   +  SSR   S ++ C AK
Sbjct: 4   AAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAK 63

Query: 62  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 121
            ETV +V +IVKKQLALP+DS VNG SKFS LGADSLDTVEIVMGLEEEFGISVEEESAQ
Sbjct: 64  QETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQ 123

Query: 122 SITTVQEAADMIEDLIFKK 138
           SI TVQ+AAD+IE L+  K
Sbjct: 124 SIQTVQDAADLIEKLVGNK 142

[Close]

BLAST of CmoCh12G011120 vs. TrEMBL
Match: A0A0A0LG91_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_2G013290 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-52
Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60
           MAS++ASS  +RSAAP+ RQI+ TSKLS  +RVSFS QGRN FSSRRLQSL+ISCAAKPE
Sbjct: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLIFKK 138
           TTVQEAAD+IEDLI KK
Sbjct: 121 TTVQEAADLIEDLILKK 137

[Close]

BLAST of CmoCh12G011120 vs. TrEMBL
Match: M5W1R0_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013030mg PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-33
Identity = 90/140 (64.29%), Postives = 107/140 (76.43%), Query Frame = 1


Query: 1   MASVS-ASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFS---SRRLQSLQISCA 60
           MA++S ASS  +RS  PRS Q    S+ + L+ +S S  GR++ S    +R   L +SCA
Sbjct: 1   MAAISGASSISLRSIPPRSHQNLALSRTNGLRSISLSDHGRSSLSFGLQQRSVRLSVSCA 60

Query: 61  AKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEES 120
           AKPETVEKV  IV+KQLALPDDS V GESKF+ LGADSLDTVEIVMGLEEEFGISVEE+S
Sbjct: 61  AKPETVEKVCTIVRKQLALPDDSAVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEDS 120

Query: 121 AQSITTVQEAADMIEDLIFK 137
           AQSI TVQ+AAD+IE +I K
Sbjct: 121 AQSIATVQDAADLIEKIIEK 140

[Close]

BLAST of CmoCh12G011120 vs. TrEMBL
Match: A0A068CBK1_OLEEU (Acyl carrier protein OS=Olea europaea GN=ACP2 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-32
Identity = 91/140 (65.00%), Postives = 112/140 (80.00%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQS--LQISCAAK 60
           MAS++ASS    ++ P  +     +++S+LK+VS S  G++ F S RLQ    +I+CAAK
Sbjct: 1   MASITASSVSFPASCPLKQ-----NQVSNLKKVSLSFSGKS-FPSLRLQPSRFRIACAAK 60

Query: 61  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
           PETVEKV +IV+KQLALP DS V GESKF++LGADSLDTVEIVMGLEEEFGISVEEESAQ
Sbjct: 61  PETVEKVCEIVRKQLALPADSAVTGESKFASLGADSLDTVEIVMGLEEEFGISVEEESAQ 120

Query: 121 SITTVQEAADMIEDLIFKKS 139
           +ITTVQEAADMIE+L  KK+
Sbjct: 121 TITTVQEAADMIENLKAKKA 134

[Close]

BLAST of CmoCh12G011120 vs. TrEMBL
Match: Q944N0_OLEEU (Acyl carrier protein OS=Olea europaea GN=ACP PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-32
Identity = 91/140 (65.00%), Postives = 111/140 (79.29%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQS--LQISCAAK 60
           MAS++ASS    ++ P  +     ++ S+LK+VS S  G++ F S RLQ    +I+CAAK
Sbjct: 1   MASITASSVSFSASCPLKQ-----NQASNLKKVSLSFSGKS-FPSLRLQPSRFRIACAAK 60

Query: 61  PETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQ 120
           PETVEKV +IV+KQLALP DS V GESKF++LGADSLDTVEIVMGLEEEFGISVEEESAQ
Sbjct: 61  PETVEKVCEIVRKQLALPADSAVTGESKFASLGADSLDTVEIVMGLEEEFGISVEEESAQ 120

Query: 121 SITTVQEAADMIEDLIFKKS 139
           +ITTVQEAADMIE+L  KK+
Sbjct: 121 TITTVQEAADMIENLKAKKA 134

[Close]

BLAST of CmoCh12G011120 vs. TrEMBL
Match: A5BLR3_VITVI (Acyl carrier protein OS=Vitis vinifera GN=VIT_14s0030g00740 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.9e-32
Identity = 86/137 (62.77%), Postives = 103/137 (75.18%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60
           MA+ + +   V+      RQ   T+ +SSLK +SFS++G    S      L++SCAAKPE
Sbjct: 1   MAAFAGTFVSVQPRPRLLRQSLATTSISSLKSLSFSNRGGRLTSQHLPLRLRVSCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKV  IVKKQLALP+DS + GESKF+ LGADSLDTVEIVMGLEEEFGI+VEEESAQSI
Sbjct: 61  TVEKVCAIVKKQLALPEDSAITGESKFAALGADSLDTVEIVMGLEEEFGINVEEESAQSI 120

Query: 121 TTVQEAADMIEDLIFKK 138
            TVQ+AAD+IE LI KK
Sbjct: 121 ATVQDAADLIEKLIEKK 137

[Close]

BLAST of CmoCh12G011120 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4)

HSP 1 Score: 115.2 bits (287), Expect = 3.3e-26
Identity = 81/149 (54.36%), Postives = 100/149 (67.11%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60
           MAS+S +S   ++ +    Q+    K SS + V+F   GR T S++ L+ LQISCAAK E
Sbjct: 1   MASLSTTSLSFKAPSTTISQVLR--KASSSQSVTF---GRFTSSTKSLR-LQISCAAKAE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDT------------VEIVMGLEEEF 120
           TV+KVS IVK+QLAL  D  +  ESKFS LGADSLDT            VEIVM LEE+F
Sbjct: 61  TVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKF 120

Query: 121 GISVEEESAQSITTVQEAADMIEDLIFKK 138
            ISVEE  AQ+ITT+QEAAD+IEDL+ KK
Sbjct: 121 NISVEESDAQNITTIQEAADLIEDLVQKK 143

[Close]

BLAST of CmoCh12G011120 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2)

HSP 1 Score: 114.4 bits (285), Expect = 5.7e-26
Identity = 70/139 (50.36%), Postives = 97/139 (69.78%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQS-LQISCAAKP 60
           MAS++AS+     A PR   I+     S +K  S   +   +F+ R+L + L +SCAAKP
Sbjct: 1   MASIAASASISLQARPRQLAIAA----SQVKSFSNGRRSSLSFNLRQLPTRLTVSCAAKP 60

Query: 61  ETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQS 120
           ETV+KV  +V+KQL+L +   +   +KF+ LGADSLDTVEIVMGLEEEFGI + EE AQS
Sbjct: 61  ETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKAQS 120

Query: 121 ITTVQEAADMIEDLIFKKS 139
           I TV++AA +IE+L+F+K+
Sbjct: 121 IATVEQAAALIEELLFEKA 135

[Close]

BLAST of CmoCh12G011120 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 110.9 bits (276), Expect = 6.3e-25
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 1


Query: 6   ASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRN--TFSSRRLQS--LQISCAAKPET 65
           A+SFC   +       + T    + +   F+++  N  +FS RRL    L +SCA K ET
Sbjct: 2   ATSFCSSISMQAPFSATTTRFCLNKQATIFNNEKTNNLSFSLRRLMPARLAVSCAVKQET 61

Query: 66  VEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSIT 125
           VEKVS+IVKKQL+L DD  V   +KF+ LGADSLDTVEIVMGLEEEFGI++ EE A+ I 
Sbjct: 62  VEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEERAKEIA 121

Query: 126 TVQEAADMIEDLIFKKS 139
           TVQ+AA++IE+L+ +K+
Sbjct: 122 TVQQAAELIEELVQEKT 138

[Close]

BLAST of CmoCh12G011120 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 108.6 bits (270), Expect = 3.1e-24
Identity = 70/136 (51.47%), Postives = 91/136 (66.91%), Query Frame = 1


Query: 2   ASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPET 61
           ASVS  + C+   A       + + +S+  + + S   R +  SRRL    +SCAAK ET
Sbjct: 7   ASVSLQTSCL---ATTRISFQKPALISNHGKTNLSFNLRRSIPSRRLS---VSCAAKQET 66

Query: 62  VEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSIT 121
           +EKVS IVKKQL+L  D  V  E+KF+ LGADSLDTVEIVMGLEEEF I + EE AQ I 
Sbjct: 67  IEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIA 126

Query: 122 TVQEAADMIEDLIFKK 138
           TV++AA++IE+LI +K
Sbjct: 127 TVEQAAELIEELINEK 136

[Close]

BLAST of CmoCh12G011120 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3)

HSP 1 Score: 108.2 bits (269), Expect = 4.1e-24
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQS-LQISCAAKP 60
           MAS++ S+     A PR   I        +K  S+  +   +F+ R+L + L + CAAKP
Sbjct: 1   MASIATSASTSLQARPRQLVIGA----KQVKSFSYGSRSNLSFNLRQLPTRLTVYCAAKP 60

Query: 61  ETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQS 120
           ETV+KV  +V+KQL+L +   +   +KF+ LGADSLDTVEIVMGLEEEFGI + EE AQS
Sbjct: 61  ETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKAQS 120

Query: 121 ITTVQEAADMIEDLIFKKS 139
           I TV++AA +IE+L+ +K+
Sbjct: 121 IATVEQAAALIEELLLEKA 135

[Close]

BLAST of CmoCh12G011120 vs. NCBI nr
Match: gi|449442875|ref|XP_004139206.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-52
Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60
           MAS++ASS  +RSAAP+ RQI+ TSKLS  +RVSFS QGRN FSSRRLQSL+ISCAAKPE
Sbjct: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLIFKK 138
           TTVQEAAD+IEDLI KK
Sbjct: 121 TTVQEAADLIEDLILKK 137

[Close]

BLAST of CmoCh12G011120 vs. NCBI nr
Match: gi|659070522|ref|XP_008455529.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 6.3e-51
Identity = 116/137 (84.67%), Postives = 126/137 (91.97%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFSSRRLQSLQISCAAKPE 60
           MAS++ASS  +R+A P  RQI+ TSKLS  + VSFS+QGRN FSSRRLQSL+ISCAAKPE
Sbjct: 1   MASITASSLSLRTAPPHCRQIAGTSKLSGSRMVSFSYQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120
           TVEKVS+IVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

Query: 121 TTVQEAADMIEDLIFKK 138
           TTVQEAAD+IEDLI KK
Sbjct: 121 TTVQEAADLIEDLILKK 137

[Close]

BLAST of CmoCh12G011120 vs. NCBI nr
Match: gi|645222390|ref|XP_008218144.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Prunus mume])

HSP 1 Score: 152.9 bits (385), Expect = 4.1e-34
Identity = 92/140 (65.71%), Postives = 108/140 (77.14%), Query Frame = 1


Query: 1   MASVS-ASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFS---SRRLQSLQISCA 60
           MA++S ASS  +RS+ PRS Q    S+ + L+ +S S  GRN+ S    +R   L +SCA
Sbjct: 1   MAAISGASSISLRSSPPRSHQNLALSRTNGLRSISLSDHGRNSLSFGLQQRSVHLSVSCA 60

Query: 61  AKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEES 120
           AKPETVEKV  IV+KQLALPDDS V GESKF+ LGADSLDTVEIVMGLEEEFGISVEE+S
Sbjct: 61  AKPETVEKVCTIVRKQLALPDDSAVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEDS 120

Query: 121 AQSITTVQEAADMIEDLIFK 137
           AQSI TVQ+AAD+IE LI K
Sbjct: 121 AQSIATVQDAADLIEKLIEK 140

[Close]

BLAST of CmoCh12G011120 vs. NCBI nr
Match: gi|595830628|ref|XP_007206112.1| (hypothetical protein PRUPE_ppa013030mg [Prunus persica])

HSP 1 Score: 149.4 bits (376), Expect = 4.5e-33
Identity = 90/140 (64.29%), Postives = 107/140 (76.43%), Query Frame = 1


Query: 1   MASVS-ASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNTFS---SRRLQSLQISCA 60
           MA++S ASS  +RS  PRS Q    S+ + L+ +S S  GR++ S    +R   L +SCA
Sbjct: 1   MAAISGASSISLRSIPPRSHQNLALSRTNGLRSISLSDHGRSSLSFGLQQRSVRLSVSCA 60

Query: 61  AKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEES 120
           AKPETVEKV  IV+KQLALPDDS V GESKF+ LGADSLDTVEIVMGLEEEFGISVEE+S
Sbjct: 61  AKPETVEKVCTIVRKQLALPDDSAVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEDS 120

Query: 121 AQSITTVQEAADMIEDLIFK 137
           AQSI TVQ+AAD+IE +I K
Sbjct: 121 AQSIATVQDAADLIEKIIEK 140

[Close]

BLAST of CmoCh12G011120 vs. NCBI nr
Match: gi|1009117422|ref|XP_015875309.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 148.7 bits (374), Expect = 7.7e-33
Identity = 90/139 (64.75%), Postives = 110/139 (79.14%), Query Frame = 1


Query: 1   MASVSASSFCVRSAAPRSRQISETSKLSSLKRVSFSHQGRNT--FSSR-RLQSLQISCAA 60
           MA++ A+S  +RS   + ++   TS+   LK VS S  GR++  F+SR R   L++SCAA
Sbjct: 1   MAAIPAASISIRSRPSQLQKSLGTSRSLGLKSVSLSDYGRSSLSFTSRPRSMRLRVSCAA 60

Query: 61  KPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESA 120
           KPETV+KV  IV+KQLA+PDDS ++GESKF+ LGADSLDTVEIVMGLEEEFGISVEEESA
Sbjct: 61  KPETVKKVCDIVRKQLAVPDDSKIDGESKFAALGADSLDTVEIVMGLEEEFGISVEEESA 120

Query: 121 QSITTVQEAADMIEDLIFK 137
           QSITTVQEAAD+IE LI K
Sbjct: 121 QSITTVQEAADLIEKLIEK 139

The following BLAST results are available for this feature:

BLAST of CmoCh12G011120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACP1_CASGL	3.5e-33	63.12	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1	[more]
ACP2_CUPLA	5.9e-33	64.49	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1	[more]
ACP1_CUPLA	9.4e-31	63.38	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1	[more]
ACP4_CUPLA	1.2e-30	63.12	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1	[more]
ACP3_CUPLA	2.7e-30	59.71	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1	[more]

BLAST of CmoCh12G011120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG91_CUCSA	1.4e-52	87.59	Acyl carrier protein OS=Cucumis sativus GN=Csa_2G013290 PE=3 SV=1	[more]
M5W1R0_PRUPE	3.1e-33	64.29	Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013030mg PE=3 SV=1	[more]
A0A068CBK1_OLEEU	1.6e-32	65.00	Acyl carrier protein OS=Olea europaea GN=ACP2 PE=3 SV=1	[more]
Q944N0_OLEEU	2.0e-32	65.00	Acyl carrier protein OS=Olea europaea GN=ACP PE=2 SV=1	[more]
A5BLR3_VITVI	5.9e-32	62.77	Acyl carrier protein OS=Vitis vinifera GN=VIT_14s0030g00740 PE=3 SV=1	[more]

BLAST of CmoCh12G011120 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25050.2	3.3e-26	54.36	acyl carrier protein 4	[more]
AT1G54580.1	5.7e-26	50.36	acyl carrier protein 2	[more]
AT5G27200.1	6.3e-25	51.09	acyl carrier protein 5	[more]
AT3G05020.1	3.1e-24	51.47	acyl carrier protein 1	[more]
AT1G54630.1	4.1e-24	47.48	acyl carrier protein 3	[more]

BLAST of CmoCh12G011120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442875\|ref\|XP_004139206.1\|	1.9e-52	87.59	PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus]	[more]
gi\|659070522\|ref\|XP_008455529.1\|	6.3e-51	84.67	PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo]	[more]
gi\|645222390\|ref\|XP_008218144.1\|	4.1e-34	65.71	PREDICTED: acyl carrier protein 1, chloroplastic [Prunus mume]	[more]
gi\|595830628\|ref\|XP_007206112.1\|	4.5e-33	64.29	hypothetical protein PRUPE_ppa013030mg [Prunus persica]	[more]
gi\|1009117422\|ref\|XP_015875309.1\|	7.7e-33	64.75	PREDICTED: acyl carrier protein 1, chloroplastic [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003231	Acyl_carrier
IPR006162	Ppantetheine_attach_site
IPR009081	PP-bd_ACP
IPR020806	PKS_PP-bd

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0031177	phosphopantetheine binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009536	plastid
molecular_function	GO:0031177	phosphopantetheine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011120.1	CmoCh12G011120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 91..132 score: 4.
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 60..134 score: 17
IPR003231	Acyl carrier protein (ACP)	TIGRFAMs	TIGR00517	TIGR00517	coord: 60..132 score: 5.6
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 89..104 scor
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	G3DSA:1.10.1200.10		coord: 50..135 score: 2.3
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 64..130 score: 1.3
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 61..131 score: 20
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 59..134 score: 3.01
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 62..116 score: 0.
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 1..139 score: 6.5
None	No IPR available	PANTHER	PTHR20863:SF29	ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..139 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G011120	Cucsa.133640	Cucumber (Gy14) v1	cgycmoB0359
CmoCh12G011120	CmaCh12G010950	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G011120	CmaCh05G011710	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G011120	Cla019842	Watermelon (97103) v1	cmowmB156
CmoCh12G011120	Csa2G013290	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G011120	MELO3C004338	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G011120	ClCG02G016240	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G011120	CSPI02G03370	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G011120	Lsi11G004850	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G011120	Cp4.1LG11g09500	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G011120	Cp4.1LG07g09400	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G011120	MELO3C004338.2	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G011120	CsaV3_2G004530	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G011120	Cla97C02G042070	Watermelon (97103) v2	cmowmbB161
CmoCh12G011120	Bhi06G001482	Wax gourd	cmowgoB0171
CmoCh12G011120	CsGy2G003470	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G011120	Carg23422	Silver-seed gourd	carcmoB0404

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G011120	CmoCh05G011960	Cucurbita moschata (Rifu)	cmocmoB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G011120	Cucumber (Gy14) v2	cgybcmoB050
CmoCh12G011120	Silver-seed gourd	carcmoB0973
CmoCh12G011120	Wax gourd	cmowgoB0229