Cp4.1LG11g09500 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g09500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Acyl carrier protein
Location	Cp4.1LG11 : 8133099 .. 8135891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGCTCTAGCATCGGCCACGTACTTACTCGCTTCGTCTTCTCCGTCCCATTTCTAGTTTTCGCCAGTCCAAATTCTCTCTCCCTTTTTCTCTATCAGTTCATCAATGGCTTCGATCACAGCTTCATTGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGTAAGTTTTCAATCCTTTTCTCTTCCTCATGCGTGCATTTATGGATCTGTTGTACGTTTTCGTATTTGCCATGTCTCGTTGTTTTTGTGTCATCAATTGCTTCGAAACTGATCTTCTTAATTCCTACCTTTTGATCTGGATTTTGGCGTCCATTTCTGTTTCAATGTCGTTAATTACGATGTTTGGAGCATTTGTTTGAATCGGTGTTGTGTTTGTATTGCATGGTTGTGAAACGTATGGATGATGGACTTGGCATCACTTCTTTGATTTCAGAATGTTTTATATCTCTTTATGGTGTTGTTTTACTTTCATTTGTGTAATTTCACTTCTGATTTGAATTTCTTGCCTAATTTTCATGCTATTTGGGGACAGAGGGCTGAAGAGAATAGTTTTCAAACTATCAGCTCCTCTCTCTTTCAAAAATGTTCTGTGAAAATAGCCTGTTCAGTTGAAAAAGAAAATTGCAACAGACCTTAATTTTCTCTCGTAATTTTTGCTCGAAAAATTCTAAGCGCAAATGCAAACCATAAATTAAGAGCGATCTTGAAATACTTGTATACAATTGTTTACCGTTGTAGTTATGAGCCAAGATGAAGTTCTTATGTCCTGAAAAATTTTCTGCATCACTGTATGTGTGTGTCGATTATAATTGATCTATTGTTCTCTTTGAATTCTCTTTCGCTGCTAAGAACTTGAGCTAGTATTAAACATCCTCTGCTGTTTCTTATGGTGAAATCGTTTCTTGGTAAGCAGGCAGGATCCAAGCTTTCTGGCTCTAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGTAAGTCCTTTTTACTGCTCTTTGAGTAAAACTTTGGTGCTATCGGGCTTCACCCACCTTTTCTTTTCAAGAATATTCTTTTTACAAGTTCTTCGATATTATCAATTTCATTTATAATTTTATAATATTTTTCCTTTTAATTTTTTTAAATAAATATATACACCATTCATTTCAATTAATCAATTGAAAATTGAGAAATACATTTCAATCAATTTAATTTTTAATTTTATCATTTTTATTTATTTATTACTTTTTTATCCACACAACACCACCTAATTTCAACTAATCAATTTAAATTGAGGGTTAAAAATAATAATTTGAGAAATACGTTATATAACCCTGTAAGAATGAAATATGTTTGAAATTTAAAATTTCAAAGATTTTGTGAAGAAAACAAGAAAAAAAAAATGTTAAAATTTAAAATATAAACATAACATCTCTGAAAAGGAAAAACCTGTAAAATAACCGAAAAAATCAATCACGTACACGTAGCATCATAATGTTAGGCCACGTGTCCGGGCTGCAAGAACTGAGTGCAGCCCATCTAGTACCCAAATTTTGGTCCCCTGGACAACACCAATTAGTGTTGCTTTAATGGTATTAATTGGGGTATGGACAGGCGAAACCAGAGACAGTTGAAAAGGTTAGCCGAATAGTGAAGAAGCAATTGGCATTGGCAGATGACTCCACTGTCAATGGCGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTCGACACGGTAAACTTCTACTCTGTATATGTCTACTGTATATATATATATTTTGTTGAGGATTATTGGGAGTGAGGCCCACCTTGGTTAATTTAGATCATGAGTTTATAAGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAAAGCTTATGCTCAAAGTGGAGAATATCATACCATTGCGGAGTGTCGTGATTCCTAACATATATATACTTCTAAAACATTGTATATGCTTTGACTATGAGACAATGGGCTCATATTATTATAAAGTTTTTGTATATGTGTGTGTGGGGTGATATCAGGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCGCAGAGCATCACGACCGTTCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAAAAATCCCACTCCCTTTCAGCATCTTACCATGTTTTTTGCCTTCTGTTTCTTTTACTCGCACTACTACTGTCACACTGCTACTCAATGTAGTATTAGGTCGTAAAATAATGATACCACTTTTTGTTTCCTAATCTTCTCTCTTTAAGATATGTTCCCCTAATTAGTTTTT

mRNA sequence

TAAGCTCTAGCATCGGCCACGTACTTACTCGCTTCGTCTTCTCCGTCCCATTTCTAGTTTTCGCCAGTCCAAATTCTCTCTCCCTTTTTCTCTATCAGTTCATCAATGGCTTCGATCACAGCTTCATTGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGCAGGATCCAAGCTTTCTGGCTCTAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCGCAGAGCATCACGACCGTTCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAAAAATCCCACTCCCTTTCAGCATCTTACCATGTTTTTTGCCTTCTGTTTCTTTTACTCGCACTACTACTGTCACACTGCTACTCAATGTAGTATTAGGTCGTAAAATAATGATACCACTTTTTGTTTCCTAATCTTCTCTCTTTAAGATATGTTCCCCTAATTAGTTTTT

Coding sequence (CDS)

ATGGCTTCGATCACAGCTTCATTGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGCAGGATCCAAGCTTTCTGGCTCTAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCGCAGAGCATCACGACCGTTCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAA

Protein sequence

MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKGSA

Homology

[Close]

BLAST of Cp4.1LG11g09500 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.9e-10
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKG 98
           G + FS+    SL     VEIVMGLEEEFGISVEEESAQSI TVQ+AAD+IE L+ KKG
Sbjct: 84  GLSKFSALGADSLD---TVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKKG 139

[Close]

BLAST of Cp4.1LG11g09500 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.9e-10
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKG 98
           G + FS+    SL     VEIVMGLEEEFGISVEEESAQSI TVQ+AAD+IE L+ KKG
Sbjct: 83  GLSKFSALGADSLD---TVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKKG 138

[Close]

BLAST of Cp4.1LG11g09500 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.8e-10
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKG 98
           G + FS+    SL     VEIVMGLEEEFGISVEEESAQSI TVQ+AAD+IE L+ KKG
Sbjct: 81  GVSKFSALGADSLD---TVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKKG 136

[Close]

BLAST of Cp4.1LG11g09500 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           G + F++    SL     VEIVMGLEEEFGI+VEEESAQSI TVQ+AAD+IE LI KK
Sbjct: 80  GESKFATLGADSLD---TVEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKLIEKK 134

[Close]

BLAST of Cp4.1LG11g09500 vs. Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.2e-09
Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           G + FS+    SL     VEIVMGLEEEFGISVEEESAQSI TVQ+AAD+IE L+  K
Sbjct: 88  GLSKFSALGADSLD---TVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLVGNK 142

[Close]

BLAST of Cp4.1LG11g09500 vs. TrEMBL
Match: A0A0A0LG91_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_2G013290 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-26
Identity = 84/139 (60.43%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 1   MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCA---- 60
           MASITAS   +RSAAPQ RQIA  SKLSGS+RVSFS+QGRNNFSSRRL+SL+ISCA    
Sbjct: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  -VEIV------------------------------------MGLEEEFGISVEEESAQSI 99
            VE V                                    MGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

[Close]

BLAST of Cp4.1LG11g09500 vs. TrEMBL
Match: A0A166H6H5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002438 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-09
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1


Query: 57  VEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKGSA 100
           VEIVMGLEEEFGISVEEESAQ+I TVQ+AAD+IE+L+ KKGSA
Sbjct: 96  VEIVMGLEEEFGISVEEESAQTIATVQDAADLIENLVEKKGSA 138

[Close]

BLAST of Cp4.1LG11g09500 vs. TrEMBL
Match: E6YBQ6_ARAHY (Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-09
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           G + FS+    SL     VEIVMGLEEEFGISVEE+SAQSITTVQEAAD+IE++I KK
Sbjct: 88  GESKFSALGADSLD---TVEIVMGLEEEFGISVEEDSAQSITTVQEAADLIEEIIQKK 142

[Close]

BLAST of Cp4.1LG11g09500 vs. TrEMBL
Match: E6YBR0_ARAHY (Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-09
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           G + FS+    SL     VEIVMGLEEEFGISVEE+SAQSITTVQEAAD+IE++I KK
Sbjct: 88  GESKFSALGADSLD---TVEIVMGLEEEFGISVEEDSAQSITTVQEAADLIEEIIQKK 142

[Close]

BLAST of Cp4.1LG11g09500 vs. TrEMBL
Match: E6YBQ4_ARAHY (Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-09
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1


Query: 39  GRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           G + FS+    SL     VEIVMGLEEEFGISVEE+SAQSITTVQEAAD+IE++I KK
Sbjct: 88  GESKFSALGADSLD---TVEIVMGLEEEFGISVEEDSAQSITTVQEAADLIEEIIQKK 142

[Close]

BLAST of Cp4.1LG11g09500 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4)

HSP 1 Score: 64.3 bits (155), Expect = 4.8e-11
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 1


Query: 50  SLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKGSA 100
           S+   C VEIVM LEE+F ISVEE  AQ+ITT+QEAAD+IEDL+ KK +A
Sbjct: 97  SVSYHCHVEIVMALEEKFNISVEESDAQNITTIQEAADLIEDLVQKKPAA 146

[Close]

BLAST of Cp4.1LG11g09500 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3)

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-08
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1


Query: 57  VEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           VEIVMGLEEEFGI + EE AQSI TV++AA +IE+L+L+K
Sbjct: 95  VEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLLEK 134

[Close]

BLAST of Cp4.1LG11g09500 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-08
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1


Query: 57  VEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           VEIVMGLEEEFGI + EE AQSI TV++AA +IE+L+ +K
Sbjct: 95  VEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLFEK 134

[Close]

BLAST of Cp4.1LG11g09500 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 1


Query: 57  VEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           VEIVMGLEEEFGI++ EE A+ I TVQ+AA++IE+L+ +K
Sbjct: 98  VEIVMGLEEEFGITMAEERAKEIATVQQAAELIEELVQEK 137

[Close]

BLAST of Cp4.1LG11g09500 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 51.2 bits (121), Expect = 4.2e-07
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 1


Query: 57  VEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKK 97
           VEIVMGLEEEF I + EE AQ I TV++AA++IE+LI +K
Sbjct: 97  VEIVMGLEEEFNIQMAEEKAQKIATVEQAAELIEELINEK 136

[Close]

BLAST of Cp4.1LG11g09500 vs. NCBI nr
Match: gi|449442875|ref|XP_004139206.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-26
Identity = 84/139 (60.43%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 1   MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCA---- 60
           MASITAS   +RSAAPQ RQIA  SKLSGS+RVSFS+QGRNNFSSRRL+SL+ISCA    
Sbjct: 1   MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  -VEIV------------------------------------MGLEEEFGISVEEESAQSI 99
            VE V                                    MGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

[Close]

BLAST of Cp4.1LG11g09500 vs. NCBI nr
Match: gi|659070522|ref|XP_008455529.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24
Identity = 81/139 (58.27%), Postives = 88/139 (63.31%), Query Frame = 1


Query: 1   MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCA---- 60
           MASITAS   +R+A P  RQIA  SKLSGS+ VSFSYQGRNNFSSRRL+SL+ISCA    
Sbjct: 1   MASITASSLSLRTAPPHCRQIAGTSKLSGSRMVSFSYQGRNNFSSRRLQSLRISCAAKPE 60

Query: 61  -VEIV------------------------------------MGLEEEFGISVEEESAQSI 99
            VE V                                    MGLEEEFGISVEEESAQSI
Sbjct: 61  TVEKVSRIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSI 120

[Close]

BLAST of Cp4.1LG11g09500 vs. NCBI nr
Match: gi|743829325|ref|XP_011023489.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X2 [Populus euphratica])

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 60/141 (42.55%), Postives = 69/141 (48.94%), Query Frame = 1


Query: 1   MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFS----SRRLRSLQISCA 60
           MA+ T SL  +     QSR   A S++SG K VS S QGRN  S    S   R L++SCA
Sbjct: 1   MAAFTGSLISM-----QSRPGMAASRISGLKPVSLSNQGRNTLSFGLRSVPARRLRVSCA 60

Query: 61  -----------------------------------------VEIVMGLEEEFGISVEEES 97
                                                    VEIVMGLEE FGISVEEES
Sbjct: 61  AKPETIDKVCEIVKKQLALSDEISVTGESKFSTLGADSLDTVEIVMGLEEAFGISVEEES 120

[Close]

BLAST of Cp4.1LG11g09500 vs. NCBI nr
Match: gi|743829323|ref|XP_011023487.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Populus euphratica])

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-09
Identity = 60/142 (42.25%), Postives = 69/142 (48.59%), Query Frame = 1


Query: 1   MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFS----SRRLRSLQISCA 60
           MA+ T SL  +     QSR   A S++SG K VS S QGRN  S    S   R L++SCA
Sbjct: 1   MAAFTGSLISM-----QSRPGMAASRISGLKPVSLSNQGRNTLSFGLRSVPARRLRVSCA 60

Query: 61  ------------------------------------------VEIVMGLEEEFGISVEEE 97
                                                     VEIVMGLEE FGISVEEE
Sbjct: 61  QAKPETIDKVCEIVKKQLALSDEISVTGESKFSTLGADSLDTVEIVMGLEEAFGISVEEE 120

[Close]

BLAST of Cp4.1LG11g09500 vs. NCBI nr
Match: gi|1021025211|gb|KZM82999.1| (hypothetical protein DCAR_030568 [Daucus carota subsp. sativus])

HSP 1 Score: 69.3 bits (168), Expect = 4.2e-09
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1


Query: 57  VEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKGSA 100
           VEIVMGLEEEFGISVEEESAQ+I TVQ+AAD+IE+L+ KKGSA
Sbjct: 80  VEIVMGLEEEFGISVEEESAQTIATVQDAADLIENLVEKKGSA 122

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACP1_CUPLA	2.9e-10	67.80	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1	[more]
ACP4_CUPLA	2.9e-10	67.80	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1	[more]
ACP2_CUPLA	3.8e-10	67.80	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1	[more]
ACP1_CASGL	1.5e-09	65.52	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1	[more]
ACP3_CUPLA	4.2e-09	65.52	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1	[more]

BLAST of Cp4.1LG11g09500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG91_CUCSA	3.5e-26	60.43	Acyl carrier protein OS=Cucumis sativus GN=Csa_2G013290 PE=3 SV=1	[more]
A0A166H6H5_DAUCA	2.9e-09	83.72	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002438 PE=4 SV=1	[more]
E6YBQ6_ARAHY	5.0e-09	68.97	Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1	[more]
E6YBR0_ARAHY	5.0e-09	68.97	Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1	[more]
E6YBQ4_ARAHY	5.0e-09	68.97	Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g09500 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25050.2	4.8e-11	66.00	acyl carrier protein 4	[more]
AT1G54630.1	2.2e-08	70.00	acyl carrier protein 3	[more]
AT1G54580.1	6.5e-08	67.50	acyl carrier protein 2	[more]
AT5G27200.1	1.1e-07	65.00	acyl carrier protein 5	[more]
AT3G05020.1	4.2e-07	65.00	acyl carrier protein 1	[more]

BLAST of Cp4.1LG11g09500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442875\|ref\|XP_004139206.1\|	5.0e-26	60.43	PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus]	[more]
gi\|659070522\|ref\|XP_008455529.1\|	1.6e-24	58.27	PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo]	[more]
gi\|743829325\|ref\|XP_011023489.1\|	1.5e-09	42.55	PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X2 [Populus euphra...	[more]
gi\|743829323\|ref\|XP_011023487.1\|	1.9e-09	42.25	PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Populus euphra...	[more]
gi\|1021025211\|gb\|KZM82999.1\|	4.2e-09	83.72	hypothetical protein DCAR_030568 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR009081	PP-bd_ACP
IPR003231	Acyl_carrier

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009536	plastid
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0031177	phosphopantetheine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09500.1	Cp4.1LG11g09500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 57..91 score: 7.
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	G3DSA:1.10.1200.10		coord: 56..95 score: 4.2
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 56..90 score: 9
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 56..92 score: 3.9
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 57..98 score: 2.2
None	No IPR available	PANTHER	PTHR20863:SF29	ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 57..98 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g09500	Cucsa.133640	Cucumber (Gy14) v1	cgycpeB0351
Cp4.1LG11g09500	CmaCh12G010950	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g09500	CmaCh05G011710	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g09500	CmoCh05G011960	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g09500	CmoCh12G011120	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g09500	Cla019842	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g09500	Csa2G013290	Cucumber (Chinese Long) v2	cpecuB103
Cp4.1LG11g09500	MELO3C004338	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g09500	ClCG02G016240	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g09500	CSPI02G03370	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g09500	Lsi11G004850	Bottle gourd (USVL1VR-Ls)	cpelsiB074
Cp4.1LG11g09500	MELO3C004338.2	Melon (DHL92) v3.6.1	cpemedB123
Cp4.1LG11g09500	CsaV3_2G004530	Cucumber (Chinese Long) v3	cpecucB0114
Cp4.1LG11g09500	Bhi06G001482	Wax gourd	cpewgoB0114
Cp4.1LG11g09500	CsGy2G003470	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g09500	Carg23422	Silver-seed gourd	carcpeB0410

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g09500	Cp4.1LG07g09400	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g09500	Cucurbita pepo (Zucchini)	cpecpeB001
Cp4.1LG11g09500	Cucurbita moschata (Rifu)	cmocpeB051
Cp4.1LG11g09500	Silver-seed gourd	carcpeB1005