Cp4.1LG11g09500.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGCTCTAGCATCGGCCACGTACTTACTCGCTTCGTCTTCTCCGTCCCATTTCTAGTTTTCGCCAGTCCAAATTCTCTCTCCCTTTTTCTCTATCAGTTCATCAATGGCTTCGATCACAGCTTCATTGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGTAAGTTTTCAATCCTTTTCTCTTCCTCATGCGTGCATTTATGGATCTGTTGTACGTTTTCGTATTTGCCATGTCTCGTTGTTTTTGTGTCATCAATTGCTTCGAAACTGATCTTCTTAATTCCTACCTTTTGATCTGGATTTTGGCGTCCATTTCTGTTTCAATGTCGTTAATTACGATGTTTGGAGCATTTGTTTGAATCGGTGTTGTGTTTGTATTGCATGGTTGTGAAACGTATGGATGATGGACTTGGCATCACTTCTTTGATTTCAGAATGTTTTATATCTCTTTATGGTGTTGTTTTACTTTCATTTGTGTAATTTCACTTCTGATTTGAATTTCTTGCCTAATTTTCATGCTATTTGGGGACAGAGGGCTGAAGAGAATAGTTTTCAAACTATCAGCTCCTCTCTCTTTCAAAAATGTTCTGTGAAAATAGCCTGTTCAGTTGAAAAAGAAAATTGCAACAGACCTTAATTTTCTCTCGTAATTTTTGCTCGAAAAATTCTAAGCGCAAATGCAAACCATAAATTAAGAGCGATCTTGAAATACTTGTATACAATTGTTTACCGTTGTAGTTATGAGCCAAGATGAAGTTCTTATGTCCTGAAAAATTTTCTGCATCACTGTATGTGTGTGTCGATTATAATTGATCTATTGTTCTCTTTGAATTCTCTTTCGCTGCTAAGAACTTGAGCTAGTATTAAACATCCTCTGCTGTTTCTTATGGTGAAATCGTTTCTTGGTAAGCAGGCAGGATCCAAGCTTTCTGGCTCTAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGTAAGTCCTTTTTACTGCTCTTTGAGTAAAACTTTGGTGCTATCGGGCTTCACCCACCTTTTCTTTTCAAGAATATTCTTTTTACAAGTTCTTCGATATTATCAATTTCATTTATAATTTTATAATATTTTTCCTTTTAATTTTTTTAAATAAATATATACACCATTCATTTCAATTAATCAATTGAAAATTGAGAAATACATTTCAATCAATTTAATTTTTAATTTTATCATTTTTATTTATTTATTACTTTTTTATCCACACAACACCACCTAATTTCAACTAATCAATTTAAATTGAGGGTTAAAAATAATAATTTGAGAAATACGTTATATAACCCTGTAAGAATGAAATATGTTTGAAATTTAAAATTTCAAAGATTTTGTGAAGAAAACAAGAAAAAAAAAATGTTAAAATTTAAAATATAAACATAACATCTCTGAAAAGGAAAAACCTGTAAAATAACCGAAAAAATCAATCACGTACACGTAGCATCATAATGTTAGGCCACGTGTCCGGGCTGCAAGAACTGAGTGCAGCCCATCTAGTACCCAAATTTTGGTCCCCTGGACAACACCAATTAGTGTTGCTTTAATGGTATTAATTGGGGTATGGACAGGCGAAACCAGAGACAGTTGAAAAGGTTAGCCGAATAGTGAAGAAGCAATTGGCATTGGCAGATGACTCCACTGTCAATGGCGAGTCCAAATTTTCAACGCTTGGAGCTGATTCTCTCGACACGGTAAACTTCTACTCTGTATATGTCTACTGTATATATATATATTTTGTTGAGGATTATTGGGAGTGAGGCCCACCTTGGTTAATTTAGATCATGAGTTTATAAGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCGTGAGGAATACTACCTCCATTGGTAGGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAAAGCTTATGCTCAAAGTGGAGAATATCATACCATTGCGGAGTGTCGTGATTCCTAACATATATATACTTCTAAAACATTGTATATGCTTTGACTATGAGACAATGGGCTCATATTATTATAAAGTTTTTGTATATGTGTGTGTGGGGTGATATCAGGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCGCAGAGCATCACGACCGTTCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAAAAATCCCACTCCCTTTCAGCATCTTACCATGTTTTTTGCCTTCTGTTTCTTTTACTCGCACTACTACTGTCACACTGCTACTCAATGTAGTATTAGGTCGTAAAATAATGATACCACTTTTTGTTTCCTAATCTTCTCTCTTTAAGATATGTTCCCCTAATTAGTTTTT TAAGCTCTAGCATCGGCCACGTACTTACTCGCTTCGTCTTCTCCGTCCCATTTCTAGTTTTCGCCAGTCCAAATTCTCTCTCCCTTTTTCTCTATCAGTTCATCAATGGCTTCGATCACAGCTTCATTGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGCAGGATCCAAGCTTTCTGGCTCTAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCGCAGAGCATCACGACCGTTCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAAAAATCCCACTCCCTTTCAGCATCTTACCATGTTTTTTGCCTTCTGTTTCTTTTACTCGCACTACTACTGTCACACTGCTACTCAATGTAGTATTAGGTCGTAAAATAATGATACCACTTTTTGTTTCCTAATCTTCTCTCTTTAAGATATGTTCCCCTAATTAGTTTTT ATGGCTTCGATCACAGCTTCATTGTTTTGCGTGCGATCTGCAGCTCCTCAATCGCGCCAAATCGCTGCAGGATCCAAGCTTTCTGGCTCTAAGAGGGTTTCCTTTTCTTACCAAGGGAGAAATAACTTCTCTTCTAGAAGATTACGGTCGCTTCAAATTTCATGTGCTGTTGAGATCGTAATGGGGCTGGAGGAAGAATTTGGGATAAGCGTGGAAGAGGAGAGCGCGCAGAGCATCACGACCGTTCAAGAGGCTGCAGATATGATCGAGGATCTGATCCTCAAAAAGGGGAGTGCTTAA MASITASLFCVRSAAPQSRQIAAGSKLSGSKRVSFSYQGRNNFSSRRLRSLQISCAVEIVMGLEEEFGISVEEESAQSITTVQEAADMIEDLILKKGSA
BLAST of Cp4.1LG11g09500.1 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.9e-10 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.9e-10 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.8e-10 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09 Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 4.2e-09 Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TrEMBL
Match: A0A0A0LG91_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_2G013290 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.5e-26 Identity = 84/139 (60.43%), Postives = 91/139 (65.47%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TrEMBL
Match: A0A166H6H5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002438 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.9e-09 Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TrEMBL
Match: E6YBQ6_ARAHY (Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-09 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TrEMBL
Match: E6YBR0_ARAHY (Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-09 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TrEMBL
Match: E6YBQ4_ARAHY (Acyl carrier protein OS=Arachis hypogaea GN=ACP5 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-09 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4) HSP 1 Score: 64.3 bits (155), Expect = 4.8e-11 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3) HSP 1 Score: 55.5 bits (132), Expect = 2.2e-08 Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2) HSP 1 Score: 53.9 bits (128), Expect = 6.5e-08 Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5) HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07 Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1) HSP 1 Score: 51.2 bits (121), Expect = 4.2e-07 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. NCBI nr
Match: gi|449442875|ref|XP_004139206.1| (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus]) HSP 1 Score: 125.6 bits (314), Expect = 5.0e-26 Identity = 84/139 (60.43%), Postives = 91/139 (65.47%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. NCBI nr
Match: gi|659070522|ref|XP_008455529.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24 Identity = 81/139 (58.27%), Postives = 88/139 (63.31%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. NCBI nr
Match: gi|743829325|ref|XP_011023489.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X2 [Populus euphratica]) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-09 Identity = 60/141 (42.55%), Postives = 69/141 (48.94%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. NCBI nr
Match: gi|743829323|ref|XP_011023487.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Populus euphratica]) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-09 Identity = 60/142 (42.25%), Postives = 69/142 (48.59%), Query Frame = 1
BLAST of Cp4.1LG11g09500.1 vs. NCBI nr
Match: gi|1021025211|gb|KZM82999.1| (hypothetical protein DCAR_030568 [Daucus carota subsp. sativus]) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-09 Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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