CsGy2G003470.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAAAGGAACCCCGCAATCAAACACTACCTATTTAAGCTGTTGCAACTGCCACGAACTTGCTCGCTTTGCTTTCTCCGTCCCATTTTGCACTATCCGTTTTCCCTACTCCAAATTCTCTCTTCCCTTTGTCGATGGCTTCCATCACAGCTTCATCACTCTCTCTGCGATCTGCAGCTCCTCAATGGCGCCAAATCGCTGTAACTAATTTTCAATTCTCTCCTTTTCTTTTTCTTAACTGCATGCGTTTAGTGGATCTGTTGTACGATTACGTTGTTTTTTTTGTTCTTTCTGTATAGTCAATTGCCTCGGAACTGTTCTTAGTTTCAACCATTCTGATCTCCATTTTAGCGTCGTTTTCTCTCACATTGTCGTTAATTACGAAGTTTGGAGCATTGGCTTGAATCCGTGTTGTGATTGTATTTGCATGGCTATGAAACGTATGGATGATGGAGTTTGTATCACTTCTTTGATTTCAGAATGTTTCATATCTCTTAATTGTTTTGTTTCATGTACTAATTTGAATTTCTTCCCGAATTTTCACGGCTATTTGGGGCCGGAGGGGTAGAAGGGAATAGTTTTCGAATTACTTGCTTTCCCAGGGAGTAACAGGTCCAAAAAAGGCAACAGACCATAAATTACGAGCGATCTTGATTAATCCTTACGTATATAATCGTTTACCGTTTTAGTTATGATGATCAGTCAACTTGATGTCCTGAAAAATTATCTGCATGCTTTACTGAATATGTGTGTACTGTTAATTATCATTTGTTTATTGTTCTTTTTGAGTTTCTGACCTTATGAGACTATATAGGTCATATATGTTCTCTGATTAATTATCATTTTGGTGAACTGTTGAATTTCTTGGTAAGCAGGGAACATCCAAGCTTTCAGGTTCAAGGAGGGTTTCGTTTTCTTTCCAAGGGAGAAACAATTTCTCATCTAGAAGATTACAGTCGCTTCGAATTTCATGTGCTGTAAGTTTTTTTTCTGTTGCATGTAATTCTTAGAGAAAATGCCAATTACTAAGTATTGTTGCATTTTGACGTTTAATTGTGTGAACTATGAAACAGGCCAAGCCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGATTCCACTGTTAATGGCGAATCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTAAAGTACTTTACTGCGCATGTTTCATCAAATTTATCCTTTGCATGTCTTTTTACCATTTTTTTTATTTTATTTTAAGATTTTTTATACAAGAACAATATTCCTATAAAACACACACCAAAGCCCAACCTTTGTTTCTTCTTTTTTTTTTCAAGAATATTTTAATTTTTTTTTACATGAGTTGTGAGGAGTGATTGCACAAAGATGATGGAAGATGTCCAACCCATGATTAAAAAAAAAAAGCTCCCTTTGCATGCCCTTAACTATAGGAAAAAACTTGGGAGCAACCCTGCTACATCCAAATCAAATTAAAAGTTGCCCATGTGGTAGTTTGATTTTGTCATTTACAATAGTTCCCTTTATTTGTAAAACTACCACATTCAAATCAAATTAAAACTCCCTTTGTATTTATAAAGAACTCTAAGATTAATTCTTAATAATCCTTGACCTTCCAAATTTTCAAATAATATACATCATATATGTATGTGAGAACAGGTTGAGATTGTGATGGGACTTGAGGAAGAGTTTGGGATCAGTGTGGAAGAGGAGAGTGCACAAAGCATCACAACCGTTCAAGAGGCTGCAGATCTGATCGAGGATCTCATCCTAAAAAAAGGTGCTTAAAAATATTTCATCCACTGCATGCCTTCAAGAGGGGAGAGGGGTGAGCGAACACAAGTCTCCCCTTTTTACCATTTTGCTCTTCTGTTAGTTTATTTTACTTGTCATCTTGATTTGAAAGAGCTAGGCTCTATAGTCTTCAGTCTTTCTTTCACTCTCTCTCTTTAATCTGCTAATCATCAGTGTATTAGGTCTTAAAATAATGATATGAGACTTTTTGTTTCCAAGTTTTTTCTCCTTTCTAGATTCAATGGGTGAAGAATATATATTATATATATTATTCATAAGAAGGTCGAAGTTCAGAACCATCAGCTTTATTATTAAAAGGGGTGGATTCAAAAAAGTTGTTGATTCTTGTTCGTAGGATTAACATTGACATAGAACCTAATCGCGTTTGAATACATACATATTAATAGGGATGTATTCAGAAATGGGTTTTATACTTCTAAAAGTAACGTGAATATAATATAATTTTAC GAAAAAAAGGAACCCCGCAATCAAACACTACCTATTTAAGCTGTTGCAACTGCCACGAACTTGCTCGCTTTGCTTTCTCCGTCCCATTTTGCACTATCCGTTTTCCCTACTCCAAATTCTCTCTTCCCTTTGTCGATGGCTTCCATCACAGCTTCATCACTCTCTCTGCGATCTGCAGCTCCTCAATGGCGCCAAATCGCTGGAACATCCAAGCTTTCAGGTTCAAGGAGGGTTTCGTTTTCTTTCCAAGGGAGAAACAATTTCTCATCTAGAAGATTACAGTCGCTTCGAATTTCATGTGCTGCCAAGCCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGATTCCACTGTTAATGGCGAATCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAGATTGTGATGGGACTTGAGGAAGAGTTTGGGATCAGTGTGGAAGAGGAGAGTGCACAAAGCATCACAACCGTTCAAGAGGCTGCAGATCTGATCGAGGATCTCATCCTAAAAAAAGGTGCTTAAAAATATTTCATCCACTGCATGCCTTCAAGAGGGGAGAGGGGTGAGCGAACACAAGTCTCCCCTTTTTACCATTTTGCTCTTCTGTTAGTTTATTTTACTTGTCATCTTGATTTGAAAGAGCTAGGCTCTATAGTCTTCAGTCTTTCTTTCACTCTCTCTCTTTAATCTGCTAATCATCAGTGTATTAGGTCTTAAAATAATGATATGAGACTTTTTGTTTCCAAGTTTTTTCTCCTTTCTAGATTCAATGGGTGAAGAATATATATTATATATATTATTCATAAGAAGGTCGAAGTTCAGAACCATCAGCTTTATTATTAAAAGGGGTGGATTCAAAAAAGTTGTTGATTCTTGTTCGTAGGATTAACATTGACATAGAACCTAATCGCGTTTGAATACATACATATTAATAGGGATGTATTCAGAAATGGGTTTTATACTTCTAAAAGTAACGTGAATATAATATAATTTTAC ATGGCTTCCATCACAGCTTCATCACTCTCTCTGCGATCTGCAGCTCCTCAATGGCGCCAAATCGCTGGAACATCCAAGCTTTCAGGTTCAAGGAGGGTTTCGTTTTCTTTCCAAGGGAGAAACAATTTCTCATCTAGAAGATTACAGTCGCTTCGAATTTCATGTGCTGCCAAGCCAGAGACAGTTGAAAAGGTTAGCAAAATAGTGAAGAAGCAATTGGCATTGCCAGATGATTCCACTGTTAATGGCGAATCCAAATTTTCAACGCTTGGAGCTGATTCTCTTGACACGGTTGAGATTGTGATGGGACTTGAGGAAGAGTTTGGGATCAGTGTGGAAGAGGAGAGTGCACAAAGCATCACAACCGTTCAAGAGGCTGCAGATCTGATCGAGGATCTCATCCTAAAAAAAGGTGCTTAA MASITASSLSLRSAAPQWRQIAGTSKLSGSRRVSFSFQGRNNFSSRRLQSLRISCAAKPETVEKVSKIVKKQLALPDDSTVNGESKFSTLGADSLDTVEIVMGLEEEFGISVEEESAQSITTVQEAADLIEDLILKKGA
BLAST of CsGy2G003470.1 vs. NCBI nr
Match: XP_004139206.1 (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis sativus] >KGN60848.1 hypothetical protein Csa_2G013290 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. NCBI nr
Match: XP_008455529.1 (PREDICTED: acyl carrier protein 1, chloroplastic [Cucumis melo]) HSP 1 Score: 236.5 bits (602), Expect = 5.5e-59 Identity = 132/139 (94.96%), Postives = 135/139 (97.12%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. NCBI nr
Match: XP_022946064.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 223.0 bits (567), Expect = 6.2e-55 Identity = 124/139 (89.21%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. NCBI nr
Match: XP_023546824.1 (acyl carrier protein 1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54 Identity = 124/139 (89.21%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. NCBI nr
Match: XP_022965998.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53 Identity = 121/137 (88.32%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TAIR10
Match: AT4G25050.2 (acyl carrier protein 4) HSP 1 Score: 117.9 bits (294), Expect = 5.1e-27 Identity = 82/151 (54.30%), Postives = 102/151 (67.55%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TAIR10
Match: AT3G05020.1 (acyl carrier protein 1) HSP 1 Score: 112.1 bits (279), Expect = 2.8e-25 Identity = 72/139 (51.80%), Postives = 97/139 (69.78%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TAIR10
Match: AT1G54580.1 (acyl carrier protein 2) HSP 1 Score: 111.7 bits (278), Expect = 3.7e-25 Identity = 73/140 (52.14%), Postives = 94/140 (67.14%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TAIR10
Match: AT1G54630.1 (acyl carrier protein 3) HSP 1 Score: 111.7 bits (278), Expect = 3.7e-25 Identity = 74/141 (52.48%), Postives = 101/141 (71.63%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TAIR10
Match: AT5G27200.1 (acyl carrier protein 5) HSP 1 Score: 111.3 bits (277), Expect = 4.8e-25 Identity = 75/144 (52.08%), Postives = 101/144 (70.14%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. Swiss-Prot
Match: sp|P93092|ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.4e-34 Identity = 90/139 (64.75%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. Swiss-Prot
Match: sp|P52412|ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.0e-32 Identity = 86/133 (64.66%), Postives = 99/133 (74.44%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. Swiss-Prot
Match: sp|P52411|ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.6e-31 Identity = 90/141 (63.83%), Postives = 98/141 (69.50%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. Swiss-Prot
Match: sp|P52414|ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 9.6e-31 Identity = 89/140 (63.57%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. Swiss-Prot
Match: sp|P52413|ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.2e-29 Identity = 83/139 (59.71%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TrEMBL
Match: tr|A0A0A0LG91|A0A0A0LG91_CUCSA (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_2G013290 PE=3 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.4e-63 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TrEMBL
Match: tr|A0A1S3C143|A0A1S3C143_CUCME (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103495677 PE=3 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59 Identity = 132/139 (94.96%), Postives = 135/139 (97.12%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TrEMBL
Match: tr|A0A2N9GNE7|A0A2N9GNE7_FAGSY (Acyl carrier protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31869 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.0e-34 Identity = 93/141 (65.96%), Postives = 112/141 (79.43%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TrEMBL
Match: tr|A0A2P5E447|A0A2P5E447_PARAD (Acyl carrier protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_007300 PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34 Identity = 89/142 (62.68%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of CsGy2G003470.1 vs. TrEMBL
Match: tr|A0A2I4G9P3|A0A2I4G9P3_9ROSI (Acyl carrier protein OS=Juglans regia OX=51240 GN=LOC109005942 PE=3 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 9.0e-34 Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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