CsGy1G032340 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G032340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Calcium-binding EF-hand
Location	Chr1 : 31971633 .. 31972469 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGGAAAGATTCTTTCTCCACGCATTTCGAAGTATTTTCCAACGCTTTGTTGTGTTGGGAGATGTGAAATTTCTTGTGGTGGGTGTCATGTAACTACCAGTCACACAACAATATATGTACAACCCGAATCAGGTGCAATAAATATAAGAAAACAAAAAAGTAAAATGGTTATGAAAGGTCCTTAACATTTTAAAATTTTGTGCAACTTTAATTGTTCGAGTGTGGCACCGTGAATTTAGATTTGAATAGGGAGAGAGCGACGGCACAAAATGATGAAGACAACAACAATCATACAAACTAACTATTGGAGCGGCTGATCAATCATTTAGAAATCACCTAAATATAGCGCAAAAAAGTTAATGTATTTAAATACACTAATAACATAAATCAAACCAAAACCAATATTAATTATTCTCTGTCGCTCTTCTTTCTCTTAAAATAAAATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCAAGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG

mRNA sequence

ATGCATGGAAAGATTCTTTCTCCACGCATTTCGAAGTATTTTCCAACGCTTTGTTGTGTTGGGAGATGTGAAATTTCTTGTGGTGGGTGTCATGTAACTACCAGTCACACAACAATATATGTACAACCCGAATCAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCAAGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG

Coding sequence (CDS)

ATGCATGGAAAGATTCTTTCTCCACGCATTTCGAAGTATTTTCCAACGCTTTGTTGTGTTGGGAGATGTGAAATTTCTTGTGGTGGGTGTCATGTAACTACCAGTCACACAACAATATATGTACAACCCGAATCAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCAAGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG

Protein sequence

MHGKILSPRISKYFPTLCCVGRCEISCGGCHVTTSHTTIYVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEKAREQK

Homology

[Close]

BLAST of CsGy1G032340 vs. NCBI nr
Match: XP_004142569.1 (PREDICTED: uncharacterized protein LOC101222885 [Cucumis sativus] >KGN66803.1 hypothetical protein Csa_1G695380 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 7.6e-60
Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 40  YVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD 99
           ++   +VTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD
Sbjct: 5   FLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD 64

Query: 100 LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 159
           LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK
Sbjct: 65  LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 124

Query: 160 AREQK 165
           AREQK
Sbjct: 125 AREQK 129

[Close]

BLAST of CsGy1G032340 vs. NCBI nr
Match: XP_008462771.1 (PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52
Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 40  YVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD 99
           ++   +VTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMDPVDD
Sbjct: 5   FLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMDPVDD 64

Query: 100 LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 159
           L EVVCHKF VEKSGGIDE+EFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAVELEK
Sbjct: 65  LCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAVELEK 124

Query: 160 AREQK 165
           A+EQK
Sbjct: 125 AKEQK 129

[Close]

BLAST of CsGy1G032340 vs. NCBI nr
Match: XP_022158640.1 (uncharacterized protein LOC111025096 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 5.9e-36
Identity = 82/124 (66.13%), Postives = 96/124 (77.42%), Query Frame = 0


Query: 40  YVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD 99
           ++   +V +FINDTKIFD+CVKESF+KLD D DG LN NEL  GFRS        DPVDD
Sbjct: 5   FLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSS------TDPVDD 64

Query: 100 LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 159
           LS+ VC KF VEKSGGI+E EFKSV+ +ILLA+A GIGN PLQVALQQD  LMKAVE E+
Sbjct: 65  LSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPLQVALQQDGLLMKAVEHER 122

Query: 160 AREQ 164
           A+E+
Sbjct: 125 AKEE 122

[Close]

BLAST of CsGy1G032340 vs. NCBI nr
Match: XP_010090267.1 (uncharacterized protein LOC21389613 [Morus notabilis] >EXB39205.1 hypothetical protein L484_006174 [Morus notabilis])

HSP 1 Score: 104.8 bits (260), Expect = 2.9e-19
Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 45  SVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGF-RSHPLEFELMDP----VDD 104
           +VT FI D + FD C+ +SF  LD D DG L+  ELRVGF R  PL   + DP     D+
Sbjct: 10  TVTQFIEDEETFDGCIGQSFAMLDADGDGALSREELRVGFGRVLPLG-SVSDPRKEVADN 69

Query: 105 LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 162
           L + +  +F  +++G ID +EFKS+ ++++LAMA+GIG+ P+Q+A+ +DSFLM+AVE E 
Sbjct: 70  LFDEIFRRFDSDQNGAIDRQEFKSLSKEMVLAMARGIGDLPVQLAIDRDSFLMRAVEHEL 129

[Close]

BLAST of CsGy1G032340 vs. NCBI nr
Match: XP_006382759.2 (uncharacterized protein LOC18098935 [Populus trichocarpa] >PNT35000.1 hypothetical protein POPTR_005G049900v3 [Populus trichocarpa])

HSP 1 Score: 103.2 bits (256), Expect = 8.5e-19
Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 31  HVTTSHTTIYVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGF---RSH 90
           H     +   V   +VT F+ D K F++CVKE F+ LD D DG L+ +ELR GF    S 
Sbjct: 17  HTIKKMSLAVVNETTVTTFVEDMKAFENCVKECFEMLDVDGDGVLSRSELREGFCKLMSL 76

Query: 91  PLEFELMDPVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQ 150
             E    + +D L + +  +F  +++G ID  EFK +IR+++ AM +G GN P+ VAL+ 
Sbjct: 77  GHESSKKEKIDHLFDTIFDRFDEDQNGSIDPREFKCLIRELMFAMGRGFGNSPVLVALEI 136

Query: 151 DSFLMKAVELE 159
           DS LMKAVE E
Sbjct: 137 DSLLMKAVEHE 147

[Close]

BLAST of CsGy1G032340 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15
Identity = 46/136 (33.82%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 39  IYVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPL-----EFEL 98
           + +   +V +F++D + F   V E F  LD + DG L+ +ELR  F S  L       ++
Sbjct: 4   VLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFGVDV 63

Query: 99  MDPVDDLSEV---VCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVAL--QQD 158
           + P D+L+ +   +  KF  ++SG +D EEF+S ++ I+LA+A G+G+ P+ + L    D
Sbjct: 64  VTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDDDDD 123

Query: 159 SFLMKAVELEKAREQK 165
           +FL KA +LE ++ +K
Sbjct: 124 NFLKKAADLEASKLEK 139

[Close]

BLAST of CsGy1G032340 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10
Identity = 39/127 (30.71%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 41  VQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRS-HPLEFELM--DPV 100
           +  +++  F++DTK F+    + F+ LD D +G L+ +ELR G  +   +E E+   D  
Sbjct: 6   ITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVAPGDET 65

Query: 101 DDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVEL 160
           D++   +  +F  +    +  + F+ +I +IL AMA+GIGN P+ + +  D  +MKAV L
Sbjct: 66  DNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHNDGLIMKAV-L 125

Query: 161 EKAREQK 165
            ++++ K
Sbjct: 126 HESKQGK 127

[Close]

BLAST of CsGy1G032340 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 32/108 (29.63%), Postives = 52/108 (48.15%), Query Frame = 0


Query: 46  VTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFEL-----MDPVDDL 105
           +   + + K+FD  V++ F++LD D DG L++ EL+           L         D +
Sbjct: 20  IVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGTSPDSDHI 79

Query: 106 SEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQD 149
              V ++F       + + EFK V+ DILL MA G+   P+ V L+ D
Sbjct: 80  YSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPI-VILRMD 126

[Close]

BLAST of CsGy1G032340 vs. TrEMBL
Match: tr|A0A0A0LYD8|A0A0A0LYD8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695380 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.0e-60
Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 40  YVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD 99
           ++   +VTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD
Sbjct: 5   FLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD 64

Query: 100 LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 159
           LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK
Sbjct: 65  LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 124

Query: 160 AREQK 165
           AREQK
Sbjct: 125 AREQK 129

[Close]

BLAST of CsGy1G032340 vs. TrEMBL
Match: tr|A0A1S3CI80|A0A1S3CI80_CUCME (uncharacterized protein LOC103501058 OS=Cucumis melo OX=3656 GN=LOC103501058 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-52
Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 40  YVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDD 99
           ++   +VTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMDPVDD
Sbjct: 5   FLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMDPVDD 64

Query: 100 LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 159
           L EVVCHKF VEKSGGIDE+EFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAVELEK
Sbjct: 65  LCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAVELEK 124

Query: 160 AREQK 165
           A+EQK
Sbjct: 125 AKEQK 129

[Close]

BLAST of CsGy1G032340 vs. TrEMBL
Match: tr|W9QVC9|W9QVC9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006174 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 45  SVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGF-RSHPLEFELMDP----VDD 104
           +VT FI D + FD C+ +SF  LD D DG L+  ELRVGF R  PL   + DP     D+
Sbjct: 10  TVTQFIEDEETFDGCIGQSFAMLDADGDGALSREELRVGFGRVLPLG-SVSDPRKEVADN 69

Query: 105 LSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEK 162
           L + +  +F  +++G ID +EFKS+ ++++LAMA+GIG+ P+Q+A+ +DSFLM+AVE E 
Sbjct: 70  LFDEIFRRFDSDQNGAIDRQEFKSLSKEMVLAMARGIGDLPVQLAIDRDSFLMRAVEHEL 129

[Close]

BLAST of CsGy1G032340 vs. TrEMBL
Match: tr|A0A2K2ABW8|A0A2K2ABW8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G049900v3 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.6e-19
Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 31  HVTTSHTTIYVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGF---RSH 90
           H     +   V   +VT F+ D K F++CVKE F+ LD D DG L+ +ELR GF    S 
Sbjct: 17  HTIKKMSLAVVNETTVTTFVEDMKAFENCVKECFEMLDVDGDGVLSRSELREGFCKLMSL 76

Query: 91  PLEFELMDPVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQ 150
             E    + +D L + +  +F  +++G ID  EFK +IR+++ AM +G GN P+ VAL+ 
Sbjct: 77  GHESSKKEKIDHLFDTIFDRFDEDQNGSIDPREFKCLIRELMFAMGRGFGNSPVLVALEI 136

Query: 151 DSFLMKAVELE 159
           DS LMKAVE E
Sbjct: 137 DSLLMKAVEHE 147

[Close]

BLAST of CsGy1G032340 vs. TrEMBL
Match: tr|A0A200RDC4|A0A200RDC4_9MAGN (EF-hand domain OS=Macleaya cordata OX=56857 GN=BVC80_881g73 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 45  SVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRS----HPLEFELMDPVDDL 104
           +V +F+ D + F+ CV E FK LD + DG L  +ELR GF S            + + +L
Sbjct: 10  TVKSFVEDGEAFNKCVNEHFKDLDVNGDGVLTRSELRKGFDSLLSAGNDAGSTEEEMSNL 69

Query: 105 SEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEKA 162
            ++V  KF  +KSG +D EEF+S +++I+LA+A GIG+ P+QVAL  DSFLMKAVE E A
Sbjct: 70  YDIVFEKFDSDKSGTVDLEEFRSEMKEIMLAVASGIGDTPVQVALGSDSFLMKAVEHELA 129

The following BLAST results are available for this feature:

BLAST of CsGy1G032340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142569.1	7.6e-60	95.20	PREDICTED: uncharacterized protein LOC101222885 [Cucumis sativus] >KGN66803.1 hy...	[more]
XP_008462771.1	2.0e-52	86.40	PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]	[more]
XP_022158640.1	5.9e-36	66.13	uncharacterized protein LOC111025096 [Momordica charantia]	[more]
XP_010090267.1	2.9e-19	46.72	uncharacterized protein LOC21389613 [Morus notabilis] >EXB39205.1 hypothetical p...	[more]
XP_006382759.2	8.5e-19	41.98	uncharacterized protein LOC18098935 [Populus trichocarpa] >PNT35000.1 hypothetic...	[more]

BLAST of CsGy1G032340 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44310.1	1.8e-15	33.82	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	3.9e-10	30.71	Calcium-binding EF hand family protein	[more]
AT4G38810.2	2.6e-06	29.63	Calcium-binding EF-hand family protein	[more]

BLAST of CsGy1G032340 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G032340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYD8\|A0A0A0LYD8_CUCSA	5.0e-60	95.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695380 PE=4 SV=1	[more]
tr\|A0A1S3CI80\|A0A1S3CI80_CUCME	1.3e-52	86.40	uncharacterized protein LOC103501058 OS=Cucumis melo OX=3656 GN=LOC103501058 PE=...	[more]
tr\|W9QVC9\|W9QVC9_9ROSA	1.9e-19	46.72	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006174 PE=4 SV=1	[more]
tr\|A0A2K2ABW8\|A0A2K2ABW8_POPTR	5.6e-19	41.98	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G049900v3 PE=...	[more]
tr\|A0A200RDC4\|A0A200RDC4_9MAGN	1.4e-17	45.45	EF-hand domain OS=Macleaya cordata OX=56857 GN=BVC80_881g73 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055074	calcium ion homeostasis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0005432	calcium:sodium antiporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G032340.1	CsGy1G032340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 100..128 e-value: 89.0 score: 2.0 coord: 59..87 e-value: 0.0014 score: 27.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 61..124 e-value: 2.4E-7 score: 31.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 55..90 score: 11.752
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 96..131 score: 7.344
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 37..137 e-value: 7.1E-10 score: 41.0
None	No IPR available	PANTHER	PTHR44089:SF3	SUBFAMILY NOT NAMED	coord: 41..161
None	No IPR available	PANTHER	PTHR44089	FAMILY NOT NAMED	coord: 41..161
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 68..80
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 60..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G032340	Cla003752	Watermelon (97103) v1	cgybwmB089
CsGy1G032340	Csa1G695380	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G032340	MELO3C024676	Melon (DHL92) v3.5.1	cgybmeB041
CsGy1G032340	ClCG06G009130	Watermelon (Charleston Gray)	cgybwcgB081
CsGy1G032340	CSPI01G33770	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G032340	Lsi06G008060	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G032340	MELO3C024676.2	Melon (DHL92) v3.6.1	cgybmedB035
CsGy1G032340	CsaV3_1G045660	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G032340	Cla97C06G118920	Watermelon (97103) v2	cgybwmbB079
CsGy1G032340	Bhi02G001014	Wax gourd	cgybwgoB087

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G032340	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G032340	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G032340	Cucurbita pepo (Zucchini)	cgybcpeB112
CsGy1G032340	Watermelon (Charleston Gray)	cgybwcgB071
CsGy1G032340	Silver-seed gourd	carcgybB0899
CsGy1G032340	Watermelon (97103) v2	cgybwmbB071
CsGy1G032340	Wax gourd	cgybwgoB100