MELO3C024676 (gene) Melon (DHL92) v3.5.1

NameMELO3C024676
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative calcium-binding protein
Locationchr2 : 20192704 .. 20193093 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTGAAGGAAAGTTTTAAGAAACTCGACAGGGACAATGATGGGTTCCTCAACAAGAATGAACTTCGGAACGGGTTTGGGAGTCAGCCATTAGAATTAGAATTAATGGATCCTGTGGATGATCTTTGTGAGGTTGTTTGTCATAAATTTAATGTGGAGAAAAGTGGTGGGATTGATGAAAAAGAGTTTAAGTCTGTAATAAGGGATATTCTTCTTGCTATGGCCCTTGGGATTGGGAACTTTCCTCTCCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAAAGAACAAAAATAG

mRNA sequence

ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTGAAGGAAAGTTTTAAGAAACTCGACAGGGACAATGATGGGTTCCTCAACAAGAATGAACTTCGGAACGGGTTTGGGAGTCAGCCATTAGAATTAGAATTAATGGATCCTGTGGATGATCTTTGTGAGGTTGTTTGTCATAAATTTAATGTGGAGAAAAGTGGTGGGATTGATGAAAAAGAGTTTAAGTCTGTAATAAGGGATATTCTTCTTGCTATGGCCCTTGGGATTGGGAACTTTCCTCTCCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAAAGAACAAAAATAG

Coding sequence (CDS)

ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTGAAGGAAAGTTTTAAGAAACTCGACAGGGACAATGATGGGTTCCTCAACAAGAATGAACTTCGGAACGGGTTTGGGAGTCAGCCATTAGAATTAGAATTAATGGATCCTGTGGATGATCTTTGTGAGGTTGTTTGTCATAAATTTAATGTGGAGAAAAGTGGTGGGATTGATGAAAAAGAGTTTAAGTCTGTAATAAGGGATATTCTTCTTGCTATGGCCCTTGGGATTGGGAACTTTCCTCTCCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAAAGAACAAAAATAG

Protein sequence

MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMDPVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAVELEKAKEQK*
BLAST of MELO3C024676 vs. TrEMBL
Match: A0A0A0LYD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695380 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-58
Identity = 118/129 (91.47%), Postives = 120/129 (93.02%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60
           MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMD 60

Query: 61  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV 120
           PVDDL EVVCHKF VEKSGGIDE+EFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAV 120

Query: 121 ELEKAKEQK 130
           ELEKA+EQK
Sbjct: 121 ELEKAREQK 129

BLAST of MELO3C024676 vs. TrEMBL
Match: B9MZG7_POPTR (Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0005s05150g PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-22
Identity = 59/126 (46.83%), Postives = 85/126 (67.46%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGF---GSQPLELE 60
           MS+A +N+TTVT F+ D K F++CVKE F+ LD D DG L+++ELR GF    S   E  
Sbjct: 1   MSLAVVNETTVTTFVEDMKAFENCVKECFEMLDVDGDGVLSRSELREGFCKLMSLGHESS 60

Query: 61  LMDPVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLM 120
             + +D L + +  +F+ +++G ID +EFK +IR+++ AM  G GN P+ VAL+ DS LM
Sbjct: 61  KKEKIDHLFDTIFDRFDEDQNGSIDPREFKCLIRELMFAMGRGFGNSPVLVALEIDSLLM 120

Query: 121 KAVELE 124
           KAVE E
Sbjct: 121 KAVEHE 126

BLAST of MELO3C024676 vs. TrEMBL
Match: W9QVC9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006174 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22
Identity = 58/127 (45.67%), Postives = 87/127 (68.50%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60
           M +A LN++TVT FI D + FD C+ +SF  LD D DG L++ ELR GFG       + D
Sbjct: 1   MRLAILNNSTVTQFIEDEETFDGCIGQSFAMLDADGDGALSREELRVGFGRVLPLGSVSD 60

Query: 61  P----VDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFL 120
           P     D+L + +  +F+ +++G ID +EFKS+ ++++LAMA GIG+ P+Q+A+ +DSFL
Sbjct: 61  PRKEVADNLFDEIFRRFDSDQNGAIDRQEFKSLSKEMVLAMARGIGDLPVQLAIDRDSFL 120

Query: 121 MKAVELE 124
           M+AVE E
Sbjct: 121 MRAVEHE 127

BLAST of MELO3C024676 vs. TrEMBL
Match: A0A068ULR0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027520001 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.9e-20
Identity = 51/124 (41.13%), Postives = 85/124 (68.55%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFG---SQPLELE 60
           MSV F++   +T F+ND+  F + V E F +LD D DG L+++EL+  FG   S+  EL+
Sbjct: 1   MSVVFVDGPVITKFVNDSGAFTEFVDEHFNRLDADGDGVLSRDELQKRFGRFSSRGFELQ 60

Query: 61  LMDPVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLM 120
             + + +L  V+  KF+V+++G ID +EF+S++++I++A A  IGN P+ + LQ+DS LM
Sbjct: 61  SQEEIGNLYNVLFEKFDVDQNGTIDREEFRSLMKEIMVAKARAIGNSPVPIILQEDSLLM 120

Query: 121 KAVE 122
           +AV+
Sbjct: 121 RAVQ 124

BLAST of MELO3C024676 vs. TrEMBL
Match: A0A022Q1Y7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018466mg PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.0e-19
Identity = 49/124 (39.52%), Postives = 83/124 (66.94%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFG---SQPLELE 60
           MS+ F++  TV  F+ND++ F+    E FK LD D DG L+++EL+   G   S   +L+
Sbjct: 1   MSIEFVDGQTVMEFVNDSQAFEKWTNEKFKTLDADADGVLSRDELQKRVGKLSSMKFDLQ 60

Query: 61  LMDPVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLM 120
             D ++ L +++ +KF+V+KSG ID  EF++++++++LA A GIGN P+ + +  DS LM
Sbjct: 61  SKDEINSLYDLLFNKFDVDKSGTIDPDEFRALMKEMMLAKARGIGNSPISIIVHGDSLLM 120

Query: 121 KAVE 122
           +AV+
Sbjct: 121 RAVQ 124

BLAST of MELO3C024676 vs. TAIR10
Match: AT2G44310.1 (AT2G44310.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 85.9 bits (211), Expect = 2.0e-17
Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPL-----E 60
           M V  ++ +TV +F++D + F   V E F  LD + DG L+++ELR  F S  L      
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  LELMDPVDDLCEV---VCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVAL-- 120
           ++++ P D+L  +   +  KF+ ++SG +D +EF+S ++ I+LA+A G+G+ P+ + L  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 QQDSFLMKAVELEKAKEQK 130
             D+FL KA +LE +K +K
Sbjct: 121 DDDNFLKKAADLEASKLEK 139

BLAST of MELO3C024676 vs. TAIR10
Match: AT1G54530.1 (AT1G54530.1 Calcium-binding EF hand family protein)

HSP 1 Score: 68.2 bits (165), Expect = 4.4e-12
Identity = 42/127 (33.07%), Postives = 69/127 (54.33%), Query Frame = 1

Query: 6   LNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQ-PLELELM--DPV 65
           +   T+  F++DTK F+    + F+ LD D +G L+ +ELR G  +   +E E+   D  
Sbjct: 6   ITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVAPGDET 65

Query: 66  DDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAVEL 125
           D++   +  +F  +    +  K F+ +I +IL AMA GIGN P+ + +  D  +MKAV L
Sbjct: 66  DNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHNDGLIMKAV-L 125

Query: 126 EKAKEQK 130
            ++K+ K
Sbjct: 126 HESKQGK 127

BLAST of MELO3C024676 vs. TAIR10
Match: AT4G38810.2 (AT4G38810.2 Calcium-binding EF-hand family protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.9e-07
Identity = 34/113 (30.09%), Postives = 54/113 (47.79%), Query Frame = 1

Query: 6   LNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELEL-----MD 65
           L+ + +   + + K+FD  V++ F++LD+D DG L+  EL+         L L       
Sbjct: 15  LDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGTSP 74

Query: 66  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQD 114
             D +   V ++F       + + EFK V+ DILL MA G+   P+ V L+ D
Sbjct: 75  DSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPI-VILRMD 126

BLAST of MELO3C024676 vs. NCBI nr
Match: gi|659125605|ref|XP_008462771.1| (PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 2.9e-66
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60
           MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60

Query: 61  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV 120
           PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV 120

Query: 121 ELEKAKEQK 130
           ELEKAKEQK
Sbjct: 121 ELEKAKEQK 129

BLAST of MELO3C024676 vs. NCBI nr
Match: gi|449449633|ref|XP_004142569.1| (PREDICTED: uncharacterized protein LOC101222885 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 1.7e-58
Identity = 118/129 (91.47%), Postives = 120/129 (93.02%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60
           MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLD DNDGFLN NELR GF S PLE ELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMD 60

Query: 61  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV 120
           PVDDL EVVCHKF VEKSGGIDE+EFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAV 120

Query: 121 ELEKAKEQK 130
           ELEKA+EQK
Sbjct: 121 ELEKAREQK 129

BLAST of MELO3C024676 vs. NCBI nr
Match: gi|566169581|ref|XP_006382759.1| (calcium-binding EF hand family protein [Populus trichocarpa])

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22
Identity = 59/126 (46.83%), Postives = 85/126 (67.46%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGF---GSQPLELE 60
           MS+A +N+TTVT F+ D K F++CVKE F+ LD D DG L+++ELR GF    S   E  
Sbjct: 1   MSLAVVNETTVTTFVEDMKAFENCVKECFEMLDVDGDGVLSRSELREGFCKLMSLGHESS 60

Query: 61  LMDPVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLM 120
             + +D L + +  +F+ +++G ID +EFK +IR+++ AM  G GN P+ VAL+ DS LM
Sbjct: 61  KKEKIDHLFDTIFDRFDEDQNGSIDPREFKCLIRELMFAMGRGFGNSPVLVALEIDSLLM 120

Query: 121 KAVELE 124
           KAVE E
Sbjct: 121 KAVEHE 126

BLAST of MELO3C024676 vs. NCBI nr
Match: gi|703076147|ref|XP_010090267.1| (hypothetical protein L484_006174 [Morus notabilis])

HSP 1 Score: 113.2 bits (282), Expect = 3.4e-22
Identity = 58/127 (45.67%), Postives = 87/127 (68.50%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60
           M +A LN++TVT FI D + FD C+ +SF  LD D DG L++ ELR GFG       + D
Sbjct: 1   MRLAILNNSTVTQFIEDEETFDGCIGQSFAMLDADGDGALSREELRVGFGRVLPLGSVSD 60

Query: 61  P----VDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFL 120
           P     D+L + +  +F+ +++G ID +EFKS+ ++++LAMA GIG+ P+Q+A+ +DSFL
Sbjct: 61  PRKEVADNLFDEIFRRFDSDQNGAIDRQEFKSLSKEMVLAMARGIGDLPVQLAIDRDSFL 120

Query: 121 MKAVELE 124
           M+AVE E
Sbjct: 121 MRAVEHE 127

BLAST of MELO3C024676 vs. NCBI nr
Match: gi|743866448|ref|XP_011032468.1| (PREDICTED: uncharacterized protein LOC105131264 [Populus euphratica])

HSP 1 Score: 112.5 bits (280), Expect = 5.7e-22
Identity = 59/126 (46.83%), Postives = 84/126 (66.67%), Query Frame = 1

Query: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGF---GSQPLELE 60
           MS+A +N+TTVT F+ D K F++CVKE F+ LD D DG L+++ELR GF    S   E  
Sbjct: 1   MSLAVVNETTVTTFVEDMKAFENCVKECFEMLDVDGDGVLSRSELREGFCKLMSLGHESS 60

Query: 61  LMDPVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLM 120
             + +D L + +  +F+ +++G ID  EFK +IR+++ AM  G GN P+ VAL+ DS LM
Sbjct: 61  KKEKIDHLFDTIFDRFDEDQNGSIDPHEFKCLIRELMSAMGRGFGNSPVLVALEIDSLLM 120

Query: 121 KAVELE 124
           KAVE E
Sbjct: 121 KAVEHE 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LYD8_CUCSA1.2e-5891.47Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695380 PE=4 SV=1[more]
B9MZG7_POPTR1.0e-2246.83Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0005s0515... [more]
W9QVC9_9ROSA2.3e-2245.67Uncharacterized protein OS=Morus notabilis GN=L484_006174 PE=4 SV=1[more]
A0A068ULR0_COFCA4.9e-2041.13Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027520001 PE=4 SV=1[more]
A0A022Q1Y7_ERYGU7.0e-1939.52Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018466mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G44310.12.0e-1735.25 Calcium-binding EF-hand family protein[more]
AT1G54530.14.4e-1233.07 Calcium-binding EF hand family protein[more]
AT4G38810.21.9e-0730.09 Calcium-binding EF-hand family protein[more]
Match NameE-valueIdentityDescription
gi|659125605|ref|XP_008462771.1|2.9e-66100.00PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo][more]
gi|449449633|ref|XP_004142569.1|1.7e-5891.47PREDICTED: uncharacterized protein LOC101222885 [Cucumis sativus][more]
gi|566169581|ref|XP_006382759.1|1.5e-2246.83calcium-binding EF hand family protein [Populus trichocarpa][more]
gi|703076147|ref|XP_010090267.1|3.4e-2245.67hypothetical protein L484_006174 [Morus notabilis][more]
gi|743866448|ref|XP_011032468.1|5.7e-2246.83PREDICTED: uncharacterized protein LOC105131264 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055074 calcium ion homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005432 calcium:sodium antiporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024676T1MELO3C024676T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 26..89
score: 5.
IPR002048EF-hand domainSMARTSM00054efh_1coord: 24..52
score: 6.8E-4coord: 65..93
score:
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 20..55
score: 11.919coord: 61..96
score:
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 25..93
score: 1.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 13..103
score: 4.84
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45
scor