CSPI01G33770 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCAATATTAATTATTCTCTGTCGCTCTTCTTTCTCTTAAAATAAAATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCACGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAGGAAATAGATCAATTGCA ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCACGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCACGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG
BLAST of CSPI01G33770 vs. TrEMBL
Match: A0A0A0LYD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695380 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 3.8e-65 Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 1
BLAST of CSPI01G33770 vs. TrEMBL
Match: W9QVC9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006174 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.0e-22 Identity = 62/131 (47.33%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of CSPI01G33770 vs. TrEMBL
Match: B9MZG7_POPTR (Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0005s05150g PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 1
BLAST of CSPI01G33770 vs. TrEMBL
Match: A0A068ULR0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027520001 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.0e-19 Identity = 52/124 (41.94%), Postives = 82/124 (66.13%), Query Frame = 1
BLAST of CSPI01G33770 vs. TrEMBL
Match: A0A022Q1Y7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018466mg PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.5e-18 Identity = 50/124 (40.32%), Postives = 83/124 (66.94%), Query Frame = 1
BLAST of CSPI01G33770 vs. TAIR10
Match: AT2G44310.1 (AT2G44310.1 Calcium-binding EF-hand family protein) HSP 1 Score: 84.3 bits (207), Expect = 5.9e-17 Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = 1
BLAST of CSPI01G33770 vs. TAIR10
Match: AT1G54530.1 (AT1G54530.1 Calcium-binding EF hand family protein) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 40/127 (31.50%), Postives = 72/127 (56.69%), Query Frame = 1
BLAST of CSPI01G33770 vs. TAIR10
Match: AT4G38810.2 (AT4G38810.2 Calcium-binding EF-hand family protein) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-06 Identity = 33/113 (29.20%), Postives = 55/113 (48.67%), Query Frame = 1
BLAST of CSPI01G33770 vs. NCBI nr
Match: gi|449449633|ref|XP_004142569.1| (PREDICTED: uncharacterized protein LOC101222885 [Cucumis sativus]) HSP 1 Score: 255.4 bits (651), Expect = 5.5e-65 Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 1
BLAST of CSPI01G33770 vs. NCBI nr
Match: gi|659125605|ref|XP_008462771.1| (PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]) HSP 1 Score: 233.0 bits (593), Expect = 2.9e-58 Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 1
BLAST of CSPI01G33770 vs. NCBI nr
Match: gi|703076147|ref|XP_010090267.1| (hypothetical protein L484_006174 [Morus notabilis]) HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22 Identity = 62/131 (47.33%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of CSPI01G33770 vs. NCBI nr
Match: gi|566169581|ref|XP_006382759.1| (calcium-binding EF hand family protein [Populus trichocarpa]) HSP 1 Score: 113.2 bits (282), Expect = 3.4e-22 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 1
BLAST of CSPI01G33770 vs. NCBI nr
Match: gi|743866448|ref|XP_011032468.1| (PREDICTED: uncharacterized protein LOC105131264 [Populus euphratica]) HSP 1 Score: 112.5 bits (280), Expect = 5.7e-22 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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