CsGy1G032340.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGGAAAGATTCTTTCTCCACGCATTTCGAAGTATTTTCCAACGCTTTGTTGTGTTGGGAGATGTGAAATTTCTTGTGGTGGGTGTCATGTAACTACCAGTCACACAACAATATATGTACAACCCGAATCAGGTGCAATAAATATAAGAAAACAAAAAAGTAAAATGGTTATGAAAGGTCCTTAACATTTTAAAATTTTGTGCAACTTTAATTGTTCGAGTGTGGCACCGTGAATTTAGATTTGAATAGGGAGAGAGCGACGGCACAAAATGATGAAGACAACAACAATCATACAAACTAACTATTGGAGCGGCTGATCAATCATTTAGAAATCACCTAAATATAGCGCAAAAAAGTTAATGTATTTAAATACACTAATAACATAAATCAAACCAAAACCAATATTAATTATTCTCTGTCGCTCTTCTTTCTCTTAAAATAAAATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCAAGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG ATGCATGGAAAGATTCTTTCTCCACGCATTTCGAAGTATTTTCCAACGCTTTGTTGTGTTGGGAGATGTGAAATTTCTTGTGGTGGGTGTCATGTAACTACCAGTCACACAACAATATATGTACAACCCGAATCAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCAAGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG ATGCATGGAAAGATTCTTTCTCCACGCATTTCGAAGTATTTTCCAACGCTTTGTTGTGTTGGGAGATGTGAAATTTCTTGTGGTGGGTGTCATGTAACTACCAGTCACACAACAATATATGTACAACCCGAATCAGTTACAAACTTCATCAATGACACCAAGATATTTGACGATTGTGTCAAGGAAAGTTTTAAGAAACTCGACACGGACAATGATGGGTTTCTCAACATGAATGAACTTCGGGTCGGGTTTCGGAGTCATCCATTAGAATTTGAATTAATGGATCCTGTGGATGATCTTTCTGAGGTTGTTTGTCATAAATTTCAAGTGGAGAAAAGTGGTGGGATTGACGAAGAAGAGTTTAAATCTGTAATAAGGGATATTCTTCTTGCTATGGCCCAGGGGATTGGGAACTTTCCTCTTCAAGTTGCACTTCAACAAGATAGCTTTCTCATGAAGGCTGTTGAACTTGAAAAGGCCAGAGAACAAAAATAG MHGKILSPRISKYFPTLCCVGRCEISCGGCHVTTSHTTIYVQPESVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMDPVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAVELEKAREQK
BLAST of CsGy1G032340.1 vs. NCBI nr
Match: XP_004142569.1 (PREDICTED: uncharacterized protein LOC101222885 [Cucumis sativus] >KGN66803.1 hypothetical protein Csa_1G695380 [Cucumis sativus]) HSP 1 Score: 239.6 bits (610), Expect = 7.6e-60 Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. NCBI nr
Match: XP_008462771.1 (PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo]) HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52 Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. NCBI nr
Match: XP_022158640.1 (uncharacterized protein LOC111025096 [Momordica charantia]) HSP 1 Score: 160.2 bits (404), Expect = 5.9e-36 Identity = 82/124 (66.13%), Postives = 96/124 (77.42%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. NCBI nr
Match: XP_010090267.1 (uncharacterized protein LOC21389613 [Morus notabilis] >EXB39205.1 hypothetical protein L484_006174 [Morus notabilis]) HSP 1 Score: 104.8 bits (260), Expect = 2.9e-19 Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. NCBI nr
Match: XP_006382759.2 (uncharacterized protein LOC18098935 [Populus trichocarpa] >PNT35000.1 hypothetical protein POPTR_005G049900v3 [Populus trichocarpa]) HSP 1 Score: 103.2 bits (256), Expect = 8.5e-19 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15 Identity = 46/136 (33.82%), Postives = 80/136 (58.82%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein) HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10 Identity = 39/127 (30.71%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein) HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06 Identity = 32/108 (29.63%), Postives = 52/108 (48.15%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TrEMBL
Match: tr|A0A0A0LYD8|A0A0A0LYD8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695380 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 5.0e-60 Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TrEMBL
Match: tr|A0A1S3CI80|A0A1S3CI80_CUCME (uncharacterized protein LOC103501058 OS=Cucumis melo OX=3656 GN=LOC103501058 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.3e-52 Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TrEMBL
Match: tr|W9QVC9|W9QVC9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006174 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19 Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TrEMBL
Match: tr|A0A2K2ABW8|A0A2K2ABW8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G049900v3 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.6e-19 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of CsGy1G032340.1 vs. TrEMBL
Match: tr|A0A200RDC4|A0A200RDC4_9MAGN (EF-hand domain OS=Macleaya cordata OX=56857 GN=BVC80_881g73 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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