CsGy1G004740 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G004740
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Transcription factor
Location	Chr1 : 3115780 .. 3116649 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAGCAGAGGGCACTGGCGGCCTGCAGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAACTGGAACGCCATAGCTCAAAAGCTTCAAGGAAGATCTGGGAAGAGCTGCCGCTTGAGATGGTTCAACCAGTTGGATCCTCGAATCAACAGAACCCCTTTCACCGAGGAGGAAGAAGAGAGGCTGATGGCGTCCCACAGGGTTCATGGCAACAGATGGGCCATCATCGCAAGGCTTTTCCCCGGCCGCACCGATAACGCAGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGAAATAAATCCAAAACCCAAACCCTAACACAAACCCTAACCCAAACACACAATAATAATAATAATAACAATAATCGTCTTCTTCTTTCTTCCTTTCTCCAACTCCATGCATATCCCACTTCTAATATTTCATTCATCCCCAAACCACCACCTGGTAATTAATTATATACATTATTCTTTCATCTTTTTTATCTTTATATATATGTATGTGTGTGTTTTCATTATTATAACTTATATATTAATTATATGTATCTATGGCAGATGATGCAGCAGCGGCGGCGGCGGCGCATAGTAGTTGTTCCATTATTCATTATTACGACTTTCTCCAAGTTAATAGTACGGATTCTATGAATGGAAGTGAAGTGATAGATAACTCATCAAGAAAAGAAGATTATGAAGAGGTGAATAATAATAACAATGGAGAACAACAGGCGGTACTACTTCCCTTCATTGATTTTTTTTCTGCCTCCAGTAACAACACATCCATCTCATGATCCTCCTAAACACACACACACACACATATATAACCAACCCAAAAAAAATTAAACCTCCTTT

mRNA sequence

ATGTGCAGCAGAGGGCACTGGCGGCCTGCAGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAACTGGAACGCCATAGCTCAAAAGCTTCAAGGAAGATCTGGGAAGAGCTGCCGCTTGAGATGGTTCAACCAGTTGGATCCTCGAATCAACAGAACCCCTTTCACCGAGGAGGAAGAAGAGAGGCTGATGGCGTCCCACAGGGTTCATGGCAACAGATGGGCCATCATCGCAAGGCTTTTCCCCGGCCGCACCGATAACGCAGTCAAGAACCACTGGCACGTCATCATGGCTCATGATGCAGCAGCGGCGGCGGCGGCGCATAGTAGTTGTTCCATTATTCATTATTACGACTTTCTCCAAGTTAATAGTACGGATTCTATGAATGGAAGTGAAGTGATAGATAACTCATCAAGAAAAGAAGATTATGAAGAGGTGAATAATAATAACAATGGAGAACAACAGGCGGTACTACTTCCCTTCATTGATTTTTTTTCTGCCTCCAGTAACAACACATCCATCTCATGATCCTCCTAAACACACACACACACACATATATAACCAACCCAAAAAAAATTAAACCTCCTTT

Coding sequence (CDS)

ATGTGCAGCAGAGGGCACTGGCGGCCTGCAGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAACTGGAACGCCATAGCTCAAAAGCTTCAAGGAAGATCTGGGAAGAGCTGCCGCTTGAGATGGTTCAACCAGTTGGATCCTCGAATCAACAGAACCCCTTTCACCGAGGAGGAAGAAGAGAGGCTGATGGCGTCCCACAGGGTTCATGGCAACAGATGGGCCATCATCGCAAGGCTTTTCCCCGGCCGCACCGATAACGCAGTCAAGAACCACTGGCACGTCATCATGGCTCATGATGCAGCAGCGGCGGCGGCGGCGCATAGTAGTTGTTCCATTATTCATTATTACGACTTTCTCCAAGTTAATAGTACGGATTCTATGAATGGAAGTGAAGTGATAGATAACTCATCAAGAAAAGAAGATTATGAAGAGGTGAATAATAATAACAATGGAGAACAACAGGCGGTACTACTTCCCTTCATTGATTTTTTTTCTGCCTCCAGTAACAACACATCCATCTCATGA

Protein sequence

MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAHDAAAAAAAHSSCSIIHYYDFLQVNSTDSMNGSEVIDNSSRKEDYEEVNNNNNGEQQAVLLPFIDFFSASSNNTSIS

Homology

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BLAST of CsGy1G004740 vs. NCBI nr
Match: XP_011649446.1 (PREDICTED: transcriptional activator Myb-like [Cucumis sativus] >KGN63930.1 hypothetical protein Csa_1G029570 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 1.2e-55
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. NCBI nr
Match: XP_008455801.1 (PREDICTED: transcriptional activator Myb-like [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 3.6e-55
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. NCBI nr
Match: XP_023001003.1 (transcription factor MYB52-like [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 8.0e-55
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. NCBI nr
Match: OMP11013.1 (hypothetical protein CCACVL1_00729 [Corchorus capsularis])

HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 97/102 (95.10%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. NCBI nr
Match: KDP43916.1 (hypothetical protein JCGZ_20926 [Jatropha curcas])

HSP 1 Score: 220.3 bits (560), Expect = 5.2e-54
Identity = 97/102 (95.10%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKL+ELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLKELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+ASHRVHGNRWA+IARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLLASHRVHGNRWAVIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. TAIR10
Match: AT1G17950.1 (myb domain protein 52)

HSP 1 Score: 214.2 bits (544), Expect = 6.8e-56
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMA
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMA 103

[Close]

BLAST of CsGy1G004740 vs. TAIR10
Match: AT1G73410.1 (myb domain protein 54)

HSP 1 Score: 211.1 bits (536), Expect = 5.7e-55
Identity = 92/102 (90.20%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMA
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMA 104

[Close]

BLAST of CsGy1G004740 vs. TAIR10
Match: AT1G69560.1 (myb domain protein 105)

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-48
Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 3   SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMA
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMA 205

[Close]

BLAST of CsGy1G004740 vs. TAIR10
Match: AT1G26780.2 (myb domain protein 117)

HSP 1 Score: 187.6 bits (475), Expect = 6.8e-48
Identity = 82/99 (82.83%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MA
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMA 196

[Close]

BLAST of CsGy1G004740 vs. TAIR10
Match: AT4G33450.1 (myb domain protein 69)

HSP 1 Score: 181.8 bits (460), Expect = 3.7e-46
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 2   CSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTE 61
           C RGHWRP ED+ LR+LVE+YGP NWN IAQ L GRSGKSCRLRW+NQLDP I + PFTE
Sbjct: 17  CQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKPFTE 76

Query: 62  EEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEERL+ +HR+ GNRWA IARLFPGRTDNAVKNH+HVIMA
Sbjct: 77  EEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMA 117

[Close]

BLAST of CsGy1G004740 vs. Swiss-Prot
Match: sp|Q6R0C4|MYB52_ARATH (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-54
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMA
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMA 103

[Close]

BLAST of CsGy1G004740 vs. Swiss-Prot
Match: sp|Q9FX36|MYB54_ARATH (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-53
Identity = 92/102 (90.20%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMA
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMA 104

[Close]

BLAST of CsGy1G004740 vs. Swiss-Prot
Match: sp|Q5NBM8|CSA_ORYSJ (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-48
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           +C+RGHWRPAED KL++LV +YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FT
Sbjct: 46  LCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFT 105

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERLMA+HR +GN+WA+IARLFPGRTDNAVKNHWHV+MA
Sbjct: 106 EEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMA 147

[Close]

BLAST of CsGy1G004740 vs. Swiss-Prot
Match: sp|Q9SEZ4|MY105_ARATH (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-47
Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 3   SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMA
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMA 205

[Close]

BLAST of CsGy1G004740 vs. Swiss-Prot
Match: sp|Q9LQX5|MY117_ARATH (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 82/99 (82.83%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MA
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMA 196

[Close]

BLAST of CsGy1G004740 vs. TrEMBL
Match: tr|A0A0A0LPV0|A0A0A0LPV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 8.2e-56
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. TrEMBL
Match: tr|A0A1S3C1Q2|A0A1S3C1Q2_CUCME (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-55
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. TrEMBL
Match: tr|A0A1R3KV89|A0A1R3KV89_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00729 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-54
Identity = 97/102 (95.10%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. TrEMBL
Match: tr|B9SWD8|B9SWD8_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_1204520 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.4e-54
Identity = 96/102 (94.12%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKL+ELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINRTPFT
Sbjct: 1   MCTRGHWRPAEDEKLKELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMA 102

[Close]

BLAST of CsGy1G004740 vs. TrEMBL
Match: tr|A0A2R6QI58|A0A2R6QI58_ACTCH (Transcription factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18623 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.4e-54
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKLRELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINRTPFT
Sbjct: 1   MCTRGHWRPAEDEKLRELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA 103
           EEEEERL+ SHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  EEEEERLLTSHRIHGNRWAIIARLFPGRTDNAVKNHWHVIMA 102

The following BLAST results are available for this feature:

BLAST of CsGy1G004740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649446.1	1.2e-55	100.00	PREDICTED: transcriptional activator Myb-like [Cucumis sativus] >KGN63930.1 hypo...	[more]
XP_008455801.1	3.6e-55	99.02	PREDICTED: transcriptional activator Myb-like [Cucumis melo]	[more]
XP_023001003.1	8.0e-55	98.04	transcription factor MYB52-like [Cucurbita maxima]	[more]
OMP11013.1	3.1e-54	95.10	hypothetical protein CCACVL1_00729 [Corchorus capsularis]	[more]
KDP43916.1	5.2e-54	95.10	hypothetical protein JCGZ_20926 [Jatropha curcas]	[more]

BLAST of CsGy1G004740 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17950.1	6.8e-56	91.18	myb domain protein 52	[more]
AT1G73410.1	5.7e-55	90.20	myb domain protein 54	[more]
AT1G69560.1	1.8e-48	84.00	myb domain protein 105	[more]
AT1G26780.2	6.8e-48	82.83	myb domain protein 117	[more]
AT4G33450.1	3.7e-46	78.22	myb domain protein 69	[more]

BLAST of CsGy1G004740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6R0C4\|MYB52_ARATH	1.2e-54	91.18	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
sp\|Q9FX36\|MYB54_ARATH	1.0e-53	90.20	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=2 SV=1	[more]
sp\|Q5NBM8\|CSA_ORYSJ	1.7e-48	81.37	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
sp\|Q9SEZ4\|MY105_ARATH	3.2e-47	84.00	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
sp\|Q9LQX5\|MY117_ARATH	1.2e-46	82.83	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]

BLAST of CsGy1G004740 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPV0\|A0A0A0LPV0_CUCSA	8.2e-56	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1	[more]
tr\|A0A1S3C1Q2\|A0A1S3C1Q2_CUCME	2.4e-55	99.02	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 ...	[more]
tr\|A0A1R3KV89\|A0A1R3KV89_COCAP	2.0e-54	95.10	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00729 PE=4 ...	[more]
tr\|B9SWD8\|B9SWD8_RICCO	3.4e-54	94.12	R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_1204...	[more]
tr\|A0A2R6QI58\|A0A2R6QI58_ACTCH	3.4e-54	95.10	Transcription factor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G004740.1	CsGy1G004740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 55..103 e-value: 2.6E-12 score: 56.9 coord: 3..52 e-value: 3.6E-15 score: 66.4
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 4..49 e-value: 4.3E-18 score: 65.1 coord: 56..98 e-value: 1.1E-13 score: 51.0
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 58..98 e-value: 1.82861E-10 score: 52.1926
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 7..48 e-value: 8.98551E-14 score: 61.4374
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 4..56 e-value: 9.5E-23 score: 81.9
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 57..115 e-value: 2.5E-16 score: 61.2
None	No IPR available	PANTHER	PTHR10641:SF578	SUBFAMILY NOT NAMED	coord: 1..104
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..104
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 55..105 score: 20.82
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..54 score: 25.942
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 4..97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G004740	Cla018657	Watermelon (97103) v1	cgybwmB062
CsGy1G004740	Csa1G029570	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G004740	ClCG04G012700	Watermelon (Charleston Gray)	cgybwcgB051
CsGy1G004740	CSPI01G04880	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G004740	CmaCh01G007520	Cucurbita maxima (Rimu)	cgybcmaB111
CsGy1G004740	CmoCh01G007870	Cucurbita moschata (Rifu)	cgybcmoB106
CsGy1G004740	Lsi02G000200	Bottle gourd (USVL1VR-Ls)	cgyblsiB033
CsGy1G004740	Cp4.1LG02g09990	Cucurbita pepo (Zucchini)	cgybcpeB093
CsGy1G004740	MELO3C035775.2	Melon (DHL92) v3.6.1	cgybmedB016
CsGy1G004740	CsaV3_1G004830	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G004740	Cla97C04G079740	Watermelon (97103) v2	cgybwmbB051
CsGy1G004740	Bhi08G001601	Wax gourd	cgybwgoB055
CsGy1G004740	Carg06989	Silver-seed gourd	carcgybB0522

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G004740	Cucurbita maxima (Rimu)	cgybcmaB105
CsGy1G004740	Cucurbita moschata (Rifu)	cgybcmoB099
CsGy1G004740	Cucurbita pepo (Zucchini)	cgybcpeB098
CsGy1G004740	Silver-seed gourd	carcgybB0526