Cla97C04G079740 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C04G079740
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	MYB transcription factor 3
Location	Cla97Chr04 : 26834971 .. 26835776 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTCAAGGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACCGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACACAGGGTTCATGGCAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGATCAAATAGATCCAAAACCCTAACCCAAACCCAAACCCCAACCCCATCCTCTCTTCATCACAATAATCATAATCATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATCCATATCCCACTCCTACTCCTGTCTCATTCATCCCCAAACCACCTGGTAATTAATTTTATTTGTTCTTTCTTTCTTTCTCAATATCACTAACTATTTTGTTATATTTAAAAATATTTACAACTGTTTTCTTATTTAAAATGTTTACTATTGTTTGAGCTCAGATAATGCAACCCATAATTCCATTCATTATTACGACTTTCTCCATGTAAATACGGAGTCCATCAATGGGAGTGAAGTGATAGACAACTCAAGAAAAGAGGAGGATTATGAAGAGGTCAATAATCAAGAAGCCGCCACCGTTGACGATGTCGGGCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAGACCTCCAACAACTCCATCTCATCCTAA

mRNA sequence

ATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTCAAGGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACCGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACACAGGGTTCATGGCAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGATCAAATAGATCCAAAACCCTAACCCAAACCCAAACCCCAACCCCATCCTCTCTTCATCACAATAATCATAATCATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATCCATATCCCACTCCTACTCCTGTCTCATTCATCCCCAAACCACCTGATAATGCAACCCATAATTCCATTCATTATTACGACTTTCTCCATGTAAATACGGAGTCCATCAATGGGAGTGAAGTGATAGACAACTCAAGAAAAGAGGAGGATTATGAAGAGGTCAATAATCAAGAAGCCGCCACCGTTGACGATGTCGGGCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAGACCTCCAACAACTCCATCTCATCCTAA

Coding sequence (CDS)

ATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTCAAGGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACCGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCACACAGGGTTCATGGCAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGATCAAATAGATCCAAAACCCTAACCCAAACCCAAACCCCAACCCCATCCTCTCTTCATCACAATAATCATAATCATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATCCATATCCCACTCCTACTCCTGTCTCATTCATCCCCAAACCACCTGATAATGCAACCCATAATTCCATTCATTATTACGACTTTCTCCATGTAAATACGGAGTCCATCAATGGGAGTGAAGTGATAGACAACTCAAGAAAAGAGGAGGATTATGAAGAGGTCAATAATCAAGAAGCCGCCACCGTTGACGATGTCGGGCCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAGACCTCCAACAACTCCATCTCATCCTAA

Protein sequence

MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRSNRSKTLTQTQTPTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPVSFIPKPPDNATHNSIHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

Homology

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BLAST of Cla97C04G079740 vs. NCBI nr
Match: XP_023001003.1 (transcription factor MYB52-like [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 7.8e-71
Identity = 166/244 (68.03%), Postives = 175/244 (71.72%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR---------------X 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+               X
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHNSI 180
           XXXXXXXXXXXXXX                                FIPKP D     S+
Sbjct: 121 XXXXXXXXXXXXXXHLLLSSFLQTSCPPNNASLFLNHSLYPNPISSFIPKPTD----RSV 180

Query: 181 HYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNN 230
            +YDFLH+N ESIN SEVIDNSRK EDYEEVN +  AT     P+ PFIDFFSA QTSN+
Sbjct: 181 EFYDFLHLNAESINASEVIDNSRK-EDYEEVNQEATATA--ARPLFPFIDFFSA-QTSNS 236

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BLAST of Cla97C04G079740 vs. NCBI nr
Match: XP_023520216.1 (transcription factor MYB52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 1.3e-70
Identity = 161/239 (67.36%), Postives = 170/239 (71.13%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR----------XXXXXX 120
           EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+          XXXXXX
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHNSIHYYDF 180
           XXXXX                                    FIPKP D     S+ +YDF
Sbjct: 121 XXXXXSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTD----RSVEFYDF 180

Query: 181 LHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS 230
           LH+N ESIN SEVIDNSRK EDYEEVN +  AT     P+ PFIDFFSA QTSN+  SS
Sbjct: 181 LHLNAESINASEVIDNSRK-EDYEEVNQEATATA--ARPLFPFIDFFSA-QTSNSISSS 231

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BLAST of Cla97C04G079740 vs. NCBI nr
Match: XP_022924085.1 (transcription factor MYB52-like [Cucurbita moschata])

HSP 1 Score: 273.5 bits (698), Expect = 6.6e-70
Identity = 160/241 (66.39%), Postives = 169/241 (70.12%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR------------XXXX 120
           EEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR+            XXXX
Sbjct: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHNSIHYY 180
           XXXXXXX                                    FIPKP D     S+ +Y
Sbjct: 121 XXXXXXXSQNHLLFSSFLQTSCPPNNNASLFLNHSLYPNPISSFIPKPTD----RSVEFY 180

Query: 181 DFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS 230
           DFLH+N ESIN SEVIDNSRK EDYEEVN +  AT     P+ PFIDFFSA QTSN+  S
Sbjct: 181 DFLHLNAESINASEVIDNSRK-EDYEEVNQEATATA--ARPLFPFIDFFSA-QTSNSISS 233

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BLAST of Cla97C04G079740 vs. NCBI nr
Match: AKN79285.1 (MYB transcription factor 3 [Betula platyphylla])

HSP 1 Score: 241.1 bits (614), Expect = 3.6e-60
Identity = 134/248 (54.03%), Postives = 150/248 (60.48%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKLRELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 1   MCTRGHWRPAEDEKLRELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRNPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMARR                
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERSKLYAKRAAQTL 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHN----------------- 180
                                          +  +     T+N                 
Sbjct: 121 MNDQQKTSLKQDVQVNCDQTRNDLISPFVEKYRQRFAYPFTYNCPQFPKEWFSQHPSPCI 180

Query: 181 --------SIHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFID 224
                    + +YDFL VNTES NGSEVIDN+R+EE  EEVN QEA    +   V PFI+
Sbjct: 181 TMLEEKKQPVEFYDFLQVNTES-NGSEVIDNARREE--EEVNQQEAMEQQNKAGV-PFIE 240

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BLAST of Cla97C04G079740 vs. NCBI nr
Match: PNT00194.1 (hypothetical protein POPTR_015G033600v3 [Populus trichocarpa])

HSP 1 Score: 240.7 bits (613), Expect = 4.8e-60
Identity = 127/219 (57.99%), Postives = 144/219 (65.75%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKL+ELVE+YGPHNWNAIA+KL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMARR                
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARR--YRERSRLHAKRTAQ 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHNSIHYYDFLHVNTESING 180
                                          F+        +  I +YDFL VNTES N 
Sbjct: 121 ALVNEQKFSSKQDMQINCETRSFSSFLLLLMFLTYMAIADQNRPIEFYDFLQVNTES-NK 180

Query: 181 SEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSA 220
           SEVIDN+R+E+  EEV+ +E          +PFIDFFSA
Sbjct: 181 SEVIDNARRED--EEVDQREVILEHQSKAGVPFIDFFSA 214

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BLAST of Cla97C04G079740 vs. TrEMBL
Match: tr|M5WDT4|M5WDT4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa021779mg PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.9e-61
Identity = 130/223 (58.30%), Postives = 142/223 (63.68%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKLRELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 1   MCTRGHWRPAEDEKLRELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRNPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMARR                
Sbjct: 61  EEEEERLLASHRIHGNRWAIIARLFPGRTDNAVKNHWHVIMARRCRERSRLHAKLIR--- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHNSIHYYDFLHVNTESING 180
                                                 N     I +YDFL VNTES NG
Sbjct: 121 ---------------------------------TSSTTNHKDQPIEFYDFLQVNTES-NG 180

Query: 181 SEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSASQTS 224
           SEVIDN+RK+E  EEV+ +            PFI+F S + +S
Sbjct: 181 SEVIDNARKDE--EEVDQEAVGQQISKAAGAPFIEFLSVNGSS 184

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BLAST of Cla97C04G079740 vs. TrEMBL
Match: tr|A0A0H4CRL4|A0A0H4CRL4_BETPL (MYB transcription factor 3 OS=Betula platyphylla OX=78630 GN=MYB3 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60
Identity = 134/248 (54.03%), Postives = 150/248 (60.48%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKLRELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 1   MCTRGHWRPAEDEKLRELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRNPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMARR                
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERSKLYAKRAAQTL 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHN----------------- 180
                                          +  +     T+N                 
Sbjct: 121 MNDQQKTSLKQDVQVNCDQTRNDLISPFVEKYRQRFAYPFTYNCPQFPKEWFSQHPSPCI 180

Query: 181 --------SIHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFID 224
                    + +YDFL VNTES NGSEVIDN+R+EE  EEVN QEA    +   V PFI+
Sbjct: 181 TMLEEKKQPVEFYDFLQVNTES-NGSEVIDNARREE--EEVNQQEAMEQQNKAGV-PFIE 240

[Close]

BLAST of Cla97C04G079740 vs. TrEMBL
Match: tr|U5FLW4|U5FLW4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G033600v3 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.2e-60
Identity = 127/219 (57.99%), Postives = 144/219 (65.75%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKL+ELVE+YGPHNWNAIA+KL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMARR                
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARR--YRERSRLHAKRTAQ 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNATHNSIHYYDFLHVNTESING 180
                                          F+        +  I +YDFL VNTES N 
Sbjct: 121 ALVNEQKFSSKQDMQINCETRSFSSFLLLLMFLTYMAIADQNRPIEFYDFLQVNTES-NK 180

Query: 181 SEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSA 220
           SEVIDN+R+E+  EEV+ +E          +PFIDFFSA
Sbjct: 181 SEVIDNARRED--EEVDQREVILEHQSKAGVPFIDFFSA 214

[Close]

BLAST of Cla97C04G079740 vs. TrEMBL
Match: tr|A0A0E4B8Y8|A0A0E4B8Y8_POPPZ (MYB transcriptional factor OS=Populus tremula x Populus tremuloides OX=47664 GN=PtxtMYB090 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.4e-60
Identity = 131/240 (54.58%), Postives = 147/240 (61.25%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKL+ELVE+YGPHNWNAIA+KL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 2   MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFT 61

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMARR                
Sbjct: 62  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQAL 121

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKP-------------------PDNA- 180
                                          F   P                   P N  
Sbjct: 122 VNEQNFSSKQDMQINCETRSFSSFVKKYCEKFGQYPLITHSYLPAFWKEFYNGDDPSNCE 181

Query: 181 -THNSIHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSA 220
             + SI +YDFL VNT+S N SEVIDN+R+E+  EEV+ QE          +PFIDFFSA
Sbjct: 182 DQNRSIEFYDFLQVNTDS-NKSEVIDNARRED--EEVDQQEVILEHQSKTGVPFIDFFSA 238

[Close]

BLAST of Cla97C04G079740 vs. TrEMBL
Match: tr|A0A0F6S394|A0A0F6S394_POPTO (MYB transcription factor R2R3 type OS=Populus tomentosa OX=118781 GN=Potri.012G039400 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 130/246 (52.85%), Postives = 151/246 (61.38%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MC+RGHWRPAEDEKL+ELVE+YGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR---------------- 120
           EEEEERL+ASHR+HGNRWAIIAR FPGRTDNAVKNHWHVIMARR                
Sbjct: 61  EEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQTL 120

Query: 121 ---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIPKPPDNAT 180
                                                             F  + P +  
Sbjct: 121 VNDNKLSSKQDHMHVDCETRNFSSFAKKYCEKYGHYPMVTHSSLPAFCKEFYNEDPSHCE 180

Query: 181 HNS--IHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFIDFFSA 226
             S  + +YDFL VNT+S N SEVIDN+R+++  EEV+ QEA   D     +PFIDFFS 
Sbjct: 181 DQSRPVEFYDFLQVNTDS-NKSEVIDNARRDD--EEVDQQEAMENDQSKGDVPFIDFFSV 240

[Close]

BLAST of Cla97C04G079740 vs. Swiss-Prot
Match: sp|Q6R0C4|MYB52_ARATH (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55
Identity = 120/252 (47.62%), Postives = 141/252 (55.95%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMARR                
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDG 121

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF-------------------------IPK 180
                                          F                         I +
Sbjct: 122 TVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPIQE 181

Query: 181 PPDNATHNSIHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFID 228
              + T   + +Y+FL VNT+S    E+IDNSRK+E+ +   N      + V    PF D
Sbjct: 182 GAIDQTKRPMEFYNFLQVNTDS-KIHELIDNSRKDEEEDVDQNNRIPNENCV----PFFD 241

[Close]

BLAST of Cla97C04G079740 vs. Swiss-Prot
Match: sp|Q9FX36|MYB54_ARATH (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.2e-55
Identity = 94/104 (90.38%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMARR
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARR 106

[Close]

BLAST of Cla97C04G079740 vs. Swiss-Prot
Match: sp|Q5NBM8|CSA_ORYSJ (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49
Identity = 85/104 (81.73%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           +C+RGHWRPAED KL++LV +YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FT
Sbjct: 46  LCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFT 105

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EEEEERLMA+HR +GN+WA+IARLFPGRTDNAVKNHWHV+MARR
Sbjct: 106 EEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARR 149

[Close]

BLAST of Cla97C04G079740 vs. Swiss-Prot
Match: sp|Q9SEZ4|MY105_ARATH (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.4e-48
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 3   SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMAR+
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARK 207

[Close]

BLAST of Cla97C04G079740 vs. Swiss-Prot
Match: sp|Q9LQX5|MY117_ARATH (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.2e-47
Identity = 83/101 (82.18%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR+
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARK 198

[Close]

BLAST of Cla97C04G079740 vs. TAIR10
Match: AT1G17950.1 (myb domain protein 52)

HSP 1 Score: 218.0 bits (554), Expect = 6.0e-57
Identity = 120/252 (47.62%), Postives = 141/252 (55.95%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRXXXXXXXXXXXXXXXX 120
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMARR                
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDG 121

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF-------------------------IPK 180
                                          F                         I +
Sbjct: 122 TVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPIQE 181

Query: 181 PPDNATHNSIHYYDFLHVNTESINGSEVIDNSRKEEDYEEVNNQEAATVDDVGPVLPFID 228
              + T   + +Y+FL VNT+S    E+IDNSRK+E+ +   N      + V    PF D
Sbjct: 182 GAIDQTKRPMEFYNFLQVNTDS-KIHELIDNSRKDEEEDVDQNNRIPNENCV----PFFD 241

[Close]

BLAST of Cla97C04G079740 vs. TAIR10
Match: AT1G73410.1 (myb domain protein 54)

HSP 1 Score: 214.9 bits (546), Expect = 5.1e-56
Identity = 94/104 (90.38%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMARR
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARR 106

[Close]

BLAST of Cla97C04G079740 vs. TAIR10
Match: AT1G69560.1 (myb domain protein 105)

HSP 1 Score: 192.2 bits (487), Expect = 3.5e-49
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 3   SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMAR+
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARK 207

[Close]

BLAST of Cla97C04G079740 vs. TAIR10
Match: AT1G26780.2 (myb domain protein 117)

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 83/101 (82.18%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR+
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARK 198

[Close]

BLAST of Cla97C04G079740 vs. TAIR10
Match: AT5G17800.1 (myb domain protein 56)

HSP 1 Score: 185.7 bits (470), Expect = 3.3e-47
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           +CSRGHWRP ED KL+ELV ++GP NWN I+  L GRSGKSCRLRWFNQLDPRIN+  FT
Sbjct: 90  VCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRAFT 149

Query: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARR 105
           EEEE RL+A+HR +GN+WA+I+RLFPGRTDNAVKNHWHVIMARR
Sbjct: 150 EEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARR 193

The following BLAST results are available for this feature:

BLAST of Cla97C04G079740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001003.1	7.8e-71	68.03	transcription factor MYB52-like [Cucurbita maxima]	[more]
XP_023520216.1	1.3e-70	67.36	transcription factor MYB52-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924085.1	6.6e-70	66.39	transcription factor MYB52-like [Cucurbita moschata]	[more]
AKN79285.1	3.6e-60	54.03	MYB transcription factor 3 [Betula platyphylla]	[more]
PNT00194.1	4.8e-60	57.99	hypothetical protein POPTR_015G033600v3 [Populus trichocarpa]	[more]

BLAST of Cla97C04G079740 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|M5WDT4\|M5WDT4_PRUPE	4.9e-61	58.30	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa021779mg PE=4 SV=1	[more]
tr\|A0A0H4CRL4\|A0A0H4CRL4_BETPL	2.4e-60	54.03	MYB transcription factor 3 OS=Betula platyphylla OX=78630 GN=MYB3 PE=2 SV=1	[more]
tr\|U5FLW4\|U5FLW4_POPTR	3.2e-60	57.99	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G033600v3 PE=...	[more]
tr\|A0A0E4B8Y8\|A0A0E4B8Y8_POPPZ	5.4e-60	54.58	MYB transcriptional factor OS=Populus tremula x Populus tremuloides OX=47664 GN=...	[more]
tr\|A0A0F6S394\|A0A0F6S394_POPTO	1.6e-59	52.85	MYB transcription factor R2R3 type OS=Populus tomentosa OX=118781 GN=Potri.012G0...	[more]

BLAST of Cla97C04G079740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6R0C4\|MYB52_ARATH	1.1e-55	47.62	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
sp\|Q9FX36\|MYB54_ARATH	9.2e-55	90.38	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=2 SV=1	[more]
sp\|Q5NBM8\|CSA_ORYSJ	1.5e-49	81.73	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
sp\|Q9SEZ4\|MY105_ARATH	6.4e-48	83.33	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
sp\|Q9LQX5\|MY117_ARATH	3.2e-47	82.18	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]

BLAST of Cla97C04G079740 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17950.1	6.0e-57	47.62	myb domain protein 52	[more]
AT1G73410.1	5.1e-56	90.38	myb domain protein 54	[more]
AT1G69560.1	3.5e-49	83.33	myb domain protein 105	[more]
AT1G26780.2	1.8e-48	82.18	myb domain protein 117	[more]
AT5G17800.1	3.3e-47	76.92	myb domain protein 56	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0008150	biological_process
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010629	negative regulation of gene expression
biological_process	GO:0010031	circumnutation
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001135	transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0000981	RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0044212	transcription regulatory region DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C04G079740.1	Cla97C04G079740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..52 e-value: 3.6E-15 score: 66.4 coord: 55..103 e-value: 5.4E-14 score: 62.5
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 56..98 e-value: 1.7E-13 score: 50.4 coord: 4..49 e-value: 6.6E-18 score: 64.5
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 7..48 e-value: 3.68319E-14 score: 62.9782
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 58..98 e-value: 1.1477E-10 score: 53.7334
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 57..131 e-value: 8.5E-18 score: 66.0
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 4..56 e-value: 1.5E-22 score: 81.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..126
None	No IPR available	PANTHER	PTHR10641:SF578	SUBFAMILY NOT NAMED	coord: 1..131
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..131
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..54 score: 25.942
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 55..105 score: 21.063
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 4..97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C04G079740	Cla018657	Watermelon (97103) v1	wmwmbB291
Cla97C04G079740	Csa1G029570	Cucumber (Chinese Long) v2	cuwmbB052
Cla97C04G079740	ClCG04G012700	Watermelon (Charleston Gray)	wcgwmbB200
Cla97C04G079740	CSPI01G04880	Wild cucumber (PI 183967)	cpiwmbB053
Cla97C04G079740	Cucsa.112050	Cucumber (Gy14) v1	cgywmbB155
Cla97C04G079740	CmaCh13G011460	Cucurbita maxima (Rimu)	cmawmbB234
Cla97C04G079740	CmaCh01G007520	Cucurbita maxima (Rimu)	cmawmbB469
Cla97C04G079740	CmoCh13G012040	Cucurbita moschata (Rifu)	cmowmbB218
Cla97C04G079740	CmoCh01G007870	Cucurbita moschata (Rifu)	cmowmbB450
Cla97C04G079740	Lsi02G000200	Bottle gourd (USVL1VR-Ls)	lsiwmbB184
Cla97C04G079740	CsGy1G004740	Cucumber (Gy14) v2	cgybwmbB051
Cla97C04G079740	MELO3C035775.2	Melon (DHL92) v3.6.1	medwmbB147
Cla97C04G079740	Carg04694	Silver-seed gourd	carwmbB0410
Cla97C04G079740	Carg06989	Silver-seed gourd	carwmbB0549
Cla97C04G079740	CsaV3_1G004830	Cucumber (Chinese Long) v3	cucwmbB052
Cla97C04G079740	Bhi08G001601	Wax gourd	wgowmbB491

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C04G079740	Cucumber (Gy14) v2	cgybwmbB053
Cla97C04G079740	Cucumber (Gy14) v1	cgywmbB156
Cla97C04G079740	Wild cucumber (PI 183967)	cpiwmbB055
Cla97C04G079740	Cucumber (Chinese Long) v3	cucwmbB054
Cla97C04G079740	Cucumber (Chinese Long) v2	cuwmbB054
Cla97C04G079740	Melon (DHL92) v3.5.1	mewmbB159