Cp4.1LG14g05200 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g05200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTSA: Wollemia nobilis Ref_Wollemi_Transcript_13814_1438 transcribed RNA sequence
LocationCp4.1LG14 : 1113909 .. 1116204 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCCATTGTCCAATCCCATCGGATACGGCGTAGCCATCAAGGGCAATACGGCGTCGTTTACTCCAACCGCCATATCCTCCCCTAATGGAATCCAAATTTCGTAGGAACTTCCTCTTCTTCAGTCATCGGACGAAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTAGCGAAATCTCGGCCTTAATCCGAAACTCCACCGAAACACGCAGGTTATTTCTCCCAGTAACTTGCCGGAAACTTTCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTATTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGTGAGATGCCTTTTCTTAACAATCACGTATTGATTTAGTAATTTTTCTTCGGTGAATTATCTGTTTGGTTGATGAGAAAATCCGTCAGAAAGAATGTGAAAGGATAGCGAGAGGAGATTCATTTTGGATAGCGATTTATAAAAAGAAGTTGTTCGTGAATGGATCTGTTGTTTTTGGCTGCTTCCTTTAAGCTGTATTTGTTTCCAAGCCCTACTGAATTGATCATCTTCTTTGTTTTTGAGTTTGAGGCCATAAACTTCCAATTATATGCAAGCGATTCGAGTAATAGTTAGAGAATTGATAATAATTTTGTTTGTGATTTTCTATTTTTAGAAGTTAAGCAAATTGAGTGACAGTTTCTTCACTTTAATTTTGGTTCATAATTAGAATTTGGTTTGGTTTAAAAAAATTACATAATTTCCAATTTGTCCCTGAAATTTAAATTTCCTCGAGTTTTAATTTTGAGAGATGCTCGTTATGGTCTTGAATTGTTTGAAGTTACTAGTTCAGGACATAGTTCTTTGGAATTTTGTGTGGGATCGTAGCCTGATAAGTCTGGTCATTTTTTCATTTGACAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAAAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCATGGTACTTTTCAACCCTTCCTTTCTCATTCTAGCTTGCATTTAGTTCATGTCTTGATGCTTGCTGCTTGCTGCTTGCTGCTATAATATGAGATGAATTATATGAATGTCGATATCGAAACCTGTTTTCGCAAGATTGCAGGGTCGAATTGCAGGGTTATTCGAATTCTACTCGGGTTCTTGATGGCTGACTGTTATGATATTGTTTGTGATTATATGATCTTATTTCTGCTTTGAAACAATTCCATGTTTTTGTTGTCATCTTTTTGGGCTCTTCTGCATTGTTAATTCATCATGAAAGTTGTGTTAGACTTCTTAATCCATGATCATTACAGTTGAAATGTTAGACTTCTTAATCCCTTTGGTCGAATTATTCCACGAATAAAAGAAAGATCGATTCCCTGTGTTCGTCGGATAAATCAAGTTTGAGCCATGGCTTTTTTTCTGCAGGTTTACATTTGTGATAGCGTTTCTGCTGTTGCTAACCGGTGCTGCACTGAACGGTGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTGAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTCGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGTAAGCTTCGGTTGATATCAAATGTGTTTTAGAAAACCATACAAGTTATACAACTTGATTGATGTTGTCTTTATAGGAAGTAGCTGTTGTGGACTTGTATAGAAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACATTTTTATCTGTTTTATGTGAGACAAAAATGCTATACCCTACCCTACCATTTAAATTGCTTGTAAATATTATGATTGGAGGATAATAAATACAAAAAATTAATATTAAGT

mRNA sequence

TATCCATTGTCCAATCCCATCGGATACGGCGTAGCCATCAAGGGCAATACGGCGTCGTTTACTCCAACCGCCATATCCTCCCCTAATGGAATCCAAATTTCGTAGGAACTTCCTCTTCTTCAGTCATCGGACGAAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTAGCGAAATCTCGGCCTTAATCCGAAACTCCACCGAAACACGCAGGTTATTTCTCCCAGTAACTTGCCGGAAACTTTCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTATTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAAAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCATGGTTTACATTTGTGATAGCGTTTCTGCTGTTGCTAACCGGTGCTGCACTGAACGGTGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTGAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTCGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGAAGTAGCTGTTGTGGACTTGTATAGAAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACATTTTTATCTGTTTTATGTGAGACAAAAATGCTATACCCTACCCTACCATTTAAATTGCTTGTAAATATTATGATTGGAGGATAATAAATACAAAAAATTAATATTAAGT

Coding sequence (CDS)

ATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTATTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAAAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCATGGTTTACATTTGTGATAGCGTTTCTGCTGTTGCTAACCGGTGCTGCACTGAACGGTGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTGAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTCGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGA

Protein sequence

MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Homology
[Close]
BLAST of Cp4.1LG14g05200 vs. TrEMBL
Match: A0A0A0KU80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025740 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.4e-82
Identity = 160/218 (73.39%), Postives = 179/218 (82.11%), Query Frame = 1 

Query: 1   MERK-ALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVAILG++++ATGFAAE TR K NQV +V P +CKYP+SPA  LGLTAA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGG 120
           LSLL AQI I  STGC+CC RGPRPPASKWRTAV+CF +SW T+VIAFLL LTGAALN G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R EQ +YF  Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQFP PPP    TADPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPQRTADPVFVHEDTYMRRQFT 218

[Close]
BLAST of Cp4.1LG14g05200 vs. TrEMBL
Match: A0A067EBD4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028344mg PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.9e-71
Identity = 142/216 (65.74%), Postives = 161/216 (74.54%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK LA+CS V +LGLL  ATGF AE TR+KG+QV   +PT C YP+SPA  LGLTAAL
Sbjct: 1   MERKVLALCSTVGLLGLLSAATGFGAEATRIKGSQVQITSPTQCSYPRSPALGLGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLL+AQ+ INV+TGCICC RGP P  S W  A+VCFVVSWFTFVIAFLLLLTGAALN   
Sbjct: 61  SLLIAQVTINVATGCICCRRGPHPSNSNWTIALVCFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF  YYCYV+KPGVFA   V+  AS+ LG+ YYL L+SAKN   +WGN S+P   
Sbjct: 121 GEESMYFGNYYCYVVKPGVFAGGAVLSLASVTLGILYYLTLHSAKNS-GLWGNSSVPQEG 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQFPP       T +PVFVHEDTY RRQFT
Sbjct: 181 GIAMGQPQFPP-----QRTQEPVFVHEDTYMRRQFT 210

[Close]
BLAST of Cp4.1LG14g05200 vs. TrEMBL
Match: A0A068U9S1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019822001 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.8e-67
Identity = 133/214 (62.15%), Postives = 161/214 (75.23%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK + VC VV  LGLL  ATGFAAE TR+KG+QV   +P +C YP+SPA  LGLTAA+
Sbjct: 1   MERKVIVVCCVVGFLGLLSAATGFAAEATRIKGDQVKFPSPDVCVYPRSPALGLGLTAAV 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           +L++AQ+++NV+TGCICC RGP    S W+ A+VCF+VSWFTFV+AFLLLLTGAALN   
Sbjct: 61  TLMIAQVIVNVATGCICCRRGPHQANSNWKLALVCFIVSWFTFVVAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E++ YF+YYYCYV+KPGVFA A ++  AS+ LGL YY++L S KN  + WG  S P P 
Sbjct: 121 GEENMYFNYYYCYVVKPGVFAGAAILSLASVTLGLIYYVMLTSTKNVIDAWGGSSAPVPG 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQ 215
            IAM QPQF    PAQ T A PVFVHEDTY RRQ
Sbjct: 181 GIAMGQPQF----PAQNTEA-PVFVHEDTYMRRQ 209

[Close]
BLAST of Cp4.1LG14g05200 vs. TrEMBL
Match: A0A067JD79_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00583 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.8e-67
Identity = 133/216 (61.57%), Postives = 161/216 (74.54%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MER+AL +CS V  LGLL  ATGFAAEGTR+KG++V   + T C YP+SPA ALGLT+A+
Sbjct: 1   MERRALFLCSAVGFLGLLSAATGFAAEGTRIKGSEVQFTSATQCTYPRSPAMALGLTSAV 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           +L++AQ++INV+TGCICC R P+P  S W  A+VCFVVSWFTFVIAFLLLLTGAALN   
Sbjct: 61  ALMIAQVIINVATGCICCKRSPQPSNSNWTIALVCFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF  YYCYV+KPGVFA   V+  AS+ LG+ YYL LNS+K+  + WGNP +    
Sbjct: 121 GEESMYFGNYYCYVVKPGVFAGGAVLSFASITLGILYYLTLNSSKSINSTWGNPPVSSST 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQ      +Q  T DP+FVHEDTY RRQFT
Sbjct: 181 GIAMGQPQ----NTSQGGTQDPIFVHEDTYMRRQFT 212

[Close]
BLAST of Cp4.1LG14g05200 vs. TrEMBL
Match: B9IPI1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s07300g PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-65
Identity = 132/216 (61.11%), Postives = 157/216 (72.69%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKAL +CSVV +LGLL VATGF AE TR+KG++V   + T C YP+SPA  LGLTAA+
Sbjct: 1   MERKALVLCSVVGLLGLLSVATGFGAEATRIKGSEVQFTSATQCTYPRSPALGLGLTAAV 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           +L +AQ++INV+TGC+CC R      S W TA VCFV+SWFTFVIAFLLLLTGAALN   
Sbjct: 61  ALTIAQVIINVATGCVCCKRSQHSSNSNWTTAFVCFVISWFTFVIAFLLLLTGAALNNQH 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E++ YF  YYCYV+KPGVFA   V+  AS+ALG+  YL LNSAK+  + W NP +   +
Sbjct: 121 GEETMYFGNYYCYVVKPGVFAGGAVLAFASVALGILCYLTLNSAKDSNDPWPNPPLSNQS 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQF       P T DPVFVHEDTY RRQFT
Sbjct: 181 GIAMGQPQF------APHTQDPVFVHEDTYIRRQFT 210

[Close]
BLAST of Cp4.1LG14g05200 vs. TAIR10
Match: AT5G17210.1 (AT5G17210.1 Protein of unknown function (DUF1218))

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-52
Identity = 109/219 (49.77%), Postives = 141/219 (64.38%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQV---VQVTPTMCKYPQSPAAALGLT 60
           MER+ + +C V+ +LGLL   T F AE TR+K +QV   V  + T C YP+SPA  LG T
Sbjct: 1   MERRKIVMCGVLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFT 60

Query: 61  AALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN 120
           +AL L++AQI+++VS+GC CC +GP P  S W  +++CFVVSWFTFVIAFL+LL+GAALN
Sbjct: 61  SALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALN 120

Query: 121 GGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIP 180
               E+S     Y+CY++KPGVF+   V+   ++ALG+ YYL L S K         +  
Sbjct: 121 DEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAA----TTT 180

Query: 181 PPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
               IAM QPQ P          DPVFVHEDTY RRQFT
Sbjct: 181 QGTGIAMGQPQIP------ERVEDPVFVHEDTYMRRQFT 209

[Close]
BLAST of Cp4.1LG14g05200 vs. TAIR10
Match: AT1G13380.1 (AT1G13380.1 Protein of unknown function (DUF1218))

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-11
Identity = 48/161 (29.81%), Postives = 76/161 (47.20%), Query Frame = 1 

Query: 12  VAILGLLLVATGF--AAEGTRVKGNQVVQ--VTPTMCKYPQSPAAALGLTAALSLLLAQI 71
           + ++ L LVA GF  AAE  R  G  +       T C Y    A   G+ A L LL ++ 
Sbjct: 12  ILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSSES 71

Query: 72  LINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGRNEQSSYF 131
           L+   T C+C  R P  P S    +++ F+ SW TF++A   ++ GA  N    +  S  
Sbjct: 72  LLMSVTKCMCFGR-PLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKYLS-S 131

Query: 132 DYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDP 169
             + C  L+ G+F    V   A++ L ++YY+    + + P
Sbjct: 132 QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSP 170

[Close]
BLAST of Cp4.1LG14g05200 vs. TAIR10
Match: AT1G61065.1 (AT1G61065.1 Protein of unknown function (DUF1218))

HSP 1 Score: 61.2 bits (147), Expect = 8.9e-10
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 1 

Query: 44  CKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASK-WRTAVVCFVVSWFT 103
           C Y +  A  LG+ + L LL +Q+LI V++ C+CC R   P  S+ W  A+  F+ +W  
Sbjct: 43  CVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRALTPSGSRSW--AIFLFITTWVF 102

Query: 104 FVIAFLLLLTGAALNGGRNEQSSYFDYY--YCYVLKPGVFAVATVVGAASLALGLFYYLI 163
           F IA + LL G+  N    +   YF      C  L+ GVF         +  +   YY+ 
Sbjct: 103 FFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVT 162

Query: 164 LNSAKN 167
           L+ AK+
Sbjct: 163 LSRAKD 166

[Close]
BLAST of Cp4.1LG14g05200 vs. TAIR10
Match: AT4G27435.1 (AT4G27435.1 Protein of unknown function (DUF1218))

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 48/161 (29.81%), Postives = 73/161 (45.34%), Query Frame = 1 

Query: 8   VCSVVAILGLLLVATGFAAEGTRVKGNQV--VQVTPTMCKYPQSPAAALGLTAALSLLLA 67
           V ++V +  L+      AAE  R     V   +V    C Y    A   G+ A L  + +
Sbjct: 6   VSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVAS 65

Query: 68  QILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGRNEQSS 127
           QILI + + C CC +  +P  S+   A++ F+VSW  F+IA + LL G+  N    +  +
Sbjct: 66  QILIMLVSRCFCCGKPLKPGGSR-ALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRT 125

Query: 128 YF--DYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSA 165
            F  +   C  L+ GVFA        +  +  FYY    SA
Sbjct: 126 MFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

[Close]
BLAST of Cp4.1LG14g05200 vs. TAIR10
Match: AT1G52910.1 (AT1G52910.1 Protein of unknown function (DUF1218))

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 45/164 (27.44%), Postives = 76/164 (46.34%), Query Frame = 1 

Query: 8   VCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTM--CKYPQSPAAALGLTAALSLLLA 67
           V  +V IL L+ V    AAE  R  G  V         C+Y    A + G  A + L ++
Sbjct: 6   VIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFIS 65

Query: 68  QILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGRNEQSS 127
           Q++I V++ C CC +  +P  S+    ++ F++ W  F+IA + LL G+  N        
Sbjct: 66  QVIIMVASRCFCCGKALKPGGSR-ACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRR 125

Query: 128 YFDYY---YCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKN 167
            ++      C V++ GVFA        +  +  FYY+  + A++
Sbjct: 126 MWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARD 168

[Close]
BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: gi|449458299|ref|XP_004146885.1| (PREDICTED: uncharacterized protein LOC101221478 [Cucumis sativus])

HSP 1 Score: 312.4 bits (799), Expect = 6.3e-82
Identity = 160/218 (73.39%), Postives = 179/218 (82.11%), Query Frame = 1 

Query: 1   MERK-ALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVAILG++++ATGFAAE TR K NQV +V P +CKYP+SPA  LGLTAA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGG 120
           LSLL AQI I  STGC+CC RGPRPPASKWRTAV+CF +SW T+VIAFLL LTGAALN G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R EQ +YF  Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQFP PPP    TADPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPQRTADPVFVHEDTYMRRQFT 218

[Close]
BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: gi|659107725|ref|XP_008453825.1| (PREDICTED: uncharacterized protein LOC103494435 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-77
Identity = 155/220 (70.45%), Postives = 175/220 (79.55%), Query Frame = 1 

Query: 1   MERKA-LAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERKA L V  VVA LG++++ATGFAAE TR KG QV +V P +CKYP+SPA  LG TAA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGG 120
           LSLL AQI I  STGC+CC RGPRPP  KWRTAV+CF VSW T+VIAFLL LTGAALN G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R++Q +Y   Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQF--PPPPPAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQF  PPPPP    T DPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPPPQRTTDPVFVHEDTYMRRQFT 218

[Close]
BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: gi|641833512|gb|KDO52524.1| (hypothetical protein CISIN_1g028344mg [Citrus sinensis])

HSP 1 Score: 275.4 bits (703), Expect = 8.5e-71
Identity = 142/216 (65.74%), Postives = 161/216 (74.54%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK LA+CS V +LGLL  ATGF AE TR+KG+QV   +PT C YP+SPA  LGLTAAL
Sbjct: 1   MERKVLALCSTVGLLGLLSAATGFGAEATRIKGSQVQITSPTQCSYPRSPALGLGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLL+AQ+ INV+TGCICC RGP P  S W  A+VCFVVSWFTFVIAFLLLLTGAALN   
Sbjct: 61  SLLIAQVTINVATGCICCRRGPHPSNSNWTIALVCFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF  YYCYV+KPGVFA   V+  AS+ LG+ YYL L+SAKN   +WGN S+P   
Sbjct: 121 GEESMYFGNYYCYVVKPGVFAGGAVLSLASVTLGILYYLTLHSAKNS-GLWGNSSVPQEG 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQFPP       T +PVFVHEDTY RRQFT
Sbjct: 181 GIAMGQPQFPP-----QRTQEPVFVHEDTYMRRQFT 210

[Close]
BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: gi|568877605|ref|XP_006491818.1| (PREDICTED: uncharacterized protein LOC102608001 [Citrus sinensis])

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-70
Identity = 141/216 (65.28%), Postives = 161/216 (74.54%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK LA+CS V +LGLL  ATGF AE TR+KG+QV   +PT C YP+SPA  LGLTAAL
Sbjct: 1   MERKVLALCSTVGLLGLLSAATGFGAEATRIKGSQVQITSPTQCSYPRSPALGLGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLL+AQ+ INV+TGCICC RGP P  S W  A+VCFVVSWFTFVIAFLLLLTGAALN   
Sbjct: 61  SLLIAQVTINVATGCICCRRGPHPSNSNWTIALVCFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF  YYCYV+KPGVFA   V+  AS+ LG+ YYL L+SAKN   +WGN S+P   
Sbjct: 121 GEESMYFGNYYCYVVKPGVFAGGAVLSLASVTLGILYYLTLHSAKNS-GLWGNSSVPQEG 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQFPP       T +PVFVHEDT+ RRQFT
Sbjct: 181 GIAMGQPQFPP-----QRTQEPVFVHEDTFMRRQFT 210

[Close]
BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: gi|661891067|emb|CDP04949.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 263.8 bits (673), Expect = 2.6e-67
Identity = 133/214 (62.15%), Postives = 161/214 (75.23%), Query Frame = 1 

Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK + VC VV  LGLL  ATGFAAE TR+KG+QV   +P +C YP+SPA  LGLTAA+
Sbjct: 1   MERKVIVVCCVVGFLGLLSAATGFAAEATRIKGDQVKFPSPDVCVYPRSPALGLGLTAAV 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           +L++AQ+++NV+TGCICC RGP    S W+ A+VCF+VSWFTFV+AFLLLLTGAALN   
Sbjct: 61  TLMIAQVIVNVATGCICCRRGPHQANSNWKLALVCFIVSWFTFVVAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E++ YF+YYYCYV+KPGVFA A ++  AS+ LGL YY++L S KN  + WG  S P P 
Sbjct: 121 GEENMYFNYYYCYVVKPGVFAGAAILSLASVTLGLIYYVMLTSTKNVIDAWGGSSAPVPG 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQ 215
            IAM QPQF    PAQ T A PVFVHEDTY RRQ
Sbjct: 181 GIAMGQPQF----PAQNTEA-PVFVHEDTYMRRQ 209

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g05200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g05200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU80_CUCSA4.4e-8273.39Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025740 PE=4 SV=1[more]
A0A067EBD4_CITSI5.9e-7165.74Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028344mg PE=4 SV=1[more]
A0A068U9S1_COFCA1.8e-6762.15Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019822001 PE=4 SV=1[more]
A0A067JD79_JATCU6.8e-6761.57Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00583 PE=4 SV=1[more]
B9IPI1_POPTR1.7e-6561.11Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s07300g PE=4 SV=1[more]
BLAST of Cp4.1LG14g05200 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17210.17.2e-5249.77 Protein of unknown function (DUF1218)[more]
AT1G13380.12.1e-1129.81 Protein of unknown function (DUF1218)[more]
AT1G61065.18.9e-1032.54 Protein of unknown function (DUF1218)[more]
AT4G27435.11.5e-0929.81 Protein of unknown function (DUF1218)[more]
AT1G52910.11.5e-0927.44 Protein of unknown function (DUF1218)[more]
BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458299|ref|XP_004146885.1|6.3e-8273.39PREDICTED: uncharacterized protein LOC101221478 [Cucumis sativus][more]
gi|659107725|ref|XP_008453825.1|1.6e-7770.45PREDICTED: uncharacterized protein LOC103494435 [Cucumis melo][more]
gi|641833512|gb|KDO52524.1|8.5e-7165.74hypothetical protein CISIN_1g028344mg [Citrus sinensis][more]
gi|568877605|ref|XP_006491818.1|2.5e-7065.28PREDICTED: uncharacterized protein LOC102608001 [Citrus sinensis][more]
gi|661891067|emb|CDP04949.1|2.6e-6762.15unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009606DUF1218
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g05200.1Cp4.1LG14g05200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Protein of unknown function DUF1218PFAMPF06749DUF1218coord: 58..150
score: 1.6
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 1..215
score: 6.1
NoneNo IPR availablePANTHERPTHR31769:SF8SUBFAMILY NOT NAMEDcoord: 1..215
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g05200Cucsa.093840Cucumber (Gy14) v1cgycpeB0187
Cp4.1LG14g05200CmaCh16G002360Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g05200CmaCh04G003790Cucurbita maxima (Rimu)cmacpeB715
Cp4.1LG14g05200CmoCh04G004000Cucurbita moschata (Rifu)cmocpeB668
Cp4.1LG14g05200CmoCh16G002540Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g05200Cla010685Watermelon (97103) v1cpewmB224
Cp4.1LG14g05200Csa4G025740Cucumber (Chinese Long) v2cpecuB218
Cp4.1LG14g05200MELO3C017618Melon (DHL92) v3.5.1cpemeB202
Cp4.1LG14g05200ClCG07G017290Watermelon (Charleston Gray)cpewcgB211
Cp4.1LG14g05200CSPI04G04390Wild cucumber (PI 183967)cpecpiB220
Cp4.1LG14g05200Lsi07G001450Bottle gourd (USVL1VR-Ls)cpelsiB182
Cp4.1LG14g05200MELO3C017618.2Melon (DHL92) v3.6.1cpemedB244
Cp4.1LG14g05200CsaV3_4G004490Cucumber (Chinese Long) v3cpecucB0262
Cp4.1LG14g05200Bhi01G001973Wax gourdcpewgoB0299
Cp4.1LG14g05200CsGy4G004300Cucumber (Gy14) v2cgybcpeB484
Cp4.1LG14g05200Carg16777Silver-seed gourdcarcpeB1215
Cp4.1LG14g05200Carg08052Silver-seed gourdcarcpeB0523
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g05200Cp4.1LG01g03260Cucurbita pepo (Zucchini)cpecpeB234
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g05200Cucurbita maxima (Rimu)cmacpeB718
Cp4.1LG14g05200Cucurbita moschata (Rifu)cmocpeB671
Cp4.1LG14g05200Watermelon (Charleston Gray)cpewcgB190
Cp4.1LG14g05200Watermelon (97103) v1cpewmB204
Cp4.1LG14g05200Silver-seed gourdcarcpeB0525
Cp4.1LG14g05200Cucurbita pepo (Zucchini)cpecpeB238