Carg08052 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08052
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF1218 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_050 : 432877 .. 434557 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATAAGGCTCTGCTTGTGTACACTGTGGTCGTTTTTTTGGGGCTTTTGGTGATTGCCACTGGCTTCGCCGCTGAGGGCACCAAAGTTAAGGTGAAGATGCTTTTTCTTACTCATGATATATTGATTGTGTGATTTTTCTTCCGTGGATTTTCTGTTTGGTTGATGAGAAAATCCGTCGGAAAGAAAGTGATGGAATAGTATTGAAGGGGAGTTTTAATGTTCTGATTGGAAATTATATATGAAAAAGCTGTTGGTGAATTTAAAACTTAGATTGGATTGGAACTGTTGTTTTTGGCTGTTTCTATTCGTTTCCCGAGCCCTACTGAATGGATCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGTCTAATAATTGAGAAATGCCGATCTGAATCAGATGAAATCGGCATTTTATTTCCTATGGCAAATGATAGCAGAGAAGATAGATCTGACCTTTGAATTTTCTCAAAGGATTCTTGAGGCTGAGGCCATAAACTTCCAATTAGAGTCGGTTTGATAGCAATTTTGTTCTGGTTTTCAAGAGGTTATGCAATTTACTCATAGTTTCTTTTGTTTGTGCTATGCGATTTTGAATTTGGGTTGAAATTTACATAACTTCAGATTTTCTCTCTAAAATTTCGAACAGTTTCTTCTTAATCACTCAGAGTTGTAATGAGTAACCGATTCAATTCATGTAACAACAAATCAGAGACATGACTCTGGATCAAGAAATGTTCTATGGGTAGATCATAATTAAGGCTGATTTGATAACATTTTTATATCCAATCGATACAGTTTTTGAAAATCGTGCTTAATTTCTTTTAATTTTCTTAGAATAGTTATGATCTTTTCTTAAGAACATATAAATTCTCAGCTAAATTCTTGCGACACACTTTTTTTCTCTTTTCAAAACATGACTTAAAACTTGAATCTAGCTGGTCTTGTCTTAAAGATGTATGATTATGTGTACCAACTTTTGATCAGTAGAAGAGGAACTTGCATTTTAAATGAAGTTTGTATGCAAATCATTAGAAGTTTGACTAGTTGTTCTCCATTTGACAGCTTAATCATGTTATTGTAGTCAATCGTACTACGTGCAAATATCCCAAAAGTCCAGCGGTGGGCCTTGGTTTGGTTGCAGCTCTATCACTCTTGCTTGCTCATATAACGTTAAATGTTGCGACGGGGTGCTTTTGCTGCTTCGCAGCCCCTCGCTCTTCTGTTTCTAAATGGCGAATAGCCTTGATCTGCTACGTCATTTCCTGGTACTCTTCACTTGTTTGTAGCATTTTTCCATACCCTTTTCTTGGACCAACAACATTAGCTTAATTTCCTGTGCAGGATTACATTTGCGAAAGCGTTCATCATGTTGCTCACCGGTGCTGCACTGAACGACCAACGGGGCGAACAAAGCTACTTTTTAGGCTATTGCTATGTCCTGAGATCAGGATTTTTTACTGTGGCTACCATTGTGGCCACAATGAGCATAGTGCTGGGATTGGCCTATTACATCCTATTGAACTCAGCTGAGACTGAGCCTTCTGTGTTTGGTAATCCCTGCATTCCTCCTCAAGCAAACATTGCAATGGGGCAGCCCCAATTCCCTCCCCCTCCACAGAGATCTGCTGACCCCGTATTCGTCCCCGAAGACACGTACCTGAGACGACAATTCACGTGA

mRNA sequence

ATGGAGAATAAGGCTCTGCTTGTGTACACTGTGGTCGTTTTTTTGGGGCTTTTGGTGATTGCCACTGGCTTCGCCGCTGAGGGCACCAAAGTTAAGCTTAATCATGTTATTGTAGTCAATCGTACTACGTGCAAATATCCCAAAAGTCCAGCGGTGGGCCTTGGTTTGGTTGCAGCTCTATCACTCTTGCTTGCTCATATAACGTTAAATGTTGCGACGGGGTGCTTTTGCTGCTTCGCAGCCCCTCGCTCTTCTGTTTCTAAATGGCGAATAGCCTTGATCTGCTACGTCATTTCCTGGATTACATTTGCGAAAGCGTTCATCATGTTGCTCACCGGTGCTGCACTGAACGACCAACGGGGCGAACAAAGCTACTTTTTAGGCTATTGCTATGTCCTGAGATCAGGATTTTTTACTGTGGCTACCATTGTGGCCACAATGAGCATAGTGCTGGGATTGGCCTATTACATCCTATTGAACTCAGCTGAGACTGAGCCTTCTGTGTTTGGTAATCCCTGCATTCCTCCTCAAGCAAACATTGCAATGGGGCAGCCCCAATTCCCTCCCCCTCCACAGAGATCTGCTGACCCCGTATTCGTCCCCGAAGACACGTACCTGAGACGACAATTCACGTGA

Coding sequence (CDS)

ATGGAGAATAAGGCTCTGCTTGTGTACACTGTGGTCGTTTTTTTGGGGCTTTTGGTGATTGCCACTGGCTTCGCCGCTGAGGGCACCAAAGTTAAGCTTAATCATGTTATTGTAGTCAATCGTACTACGTGCAAATATCCCAAAAGTCCAGCGGTGGGCCTTGGTTTGGTTGCAGCTCTATCACTCTTGCTTGCTCATATAACGTTAAATGTTGCGACGGGGTGCTTTTGCTGCTTCGCAGCCCCTCGCTCTTCTGTTTCTAAATGGCGAATAGCCTTGATCTGCTACGTCATTTCCTGGATTACATTTGCGAAAGCGTTCATCATGTTGCTCACCGGTGCTGCACTGAACGACCAACGGGGCGAACAAAGCTACTTTTTAGGCTATTGCTATGTCCTGAGATCAGGATTTTTTACTGTGGCTACCATTGTGGCCACAATGAGCATAGTGCTGGGATTGGCCTATTACATCCTATTGAACTCAGCTGAGACTGAGCCTTCTGTGTTTGGTAATCCCTGCATTCCTCCTCAAGCAAACATTGCAATGGGGCAGCCCCAATTCCCTCCCCCTCCACAGAGATCTGCTGACCCCGTATTCGTCCCCGAAGACACGTACCTGAGACGACAATTCACGTGA

Protein sequence

MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAALSLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQRGEQSYFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQANIAMGQPQFPPPPQRSADPVFVPEDTYLRRQFT

Homology

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BLAST of Carg08052 vs. NCBI nr
Match: XP_022942637.1 (uncharacterized protein LOC111447615 [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 2.7e-110
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           ME KAL+VYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL
Sbjct: 1   MEKKALVVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR
Sbjct: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120

Query: 121 GEQSYFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQANI 180
           GEQSYFLGYCYVLRSGFFTVATIVATMSIVLGL YYILLNSAETEPSVFGNPCIPPQANI
Sbjct: 121 GEQSYFLGYCYVLRSGFFTVATIVATMSIVLGLTYYILLNSAETEPSVFGNPCIPPQANI 180

Query: 181 AMGQPQFPPPPQRSADPVFVPEDTYLRRQFT 212
           AMGQPQFPPPPQRSADPVFVPEDTY+RRQFT
Sbjct: 181 AMGQPQFPPPPQRSADPVFVPEDTYMRRQFT 211

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BLAST of Carg08052 vs. NCBI nr
Match: XP_023542651.1 (uncharacterized protein LOC111802489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.6 bits (1028), Expect = 3.3e-108
Identity = 202/211 (95.73%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           MENKAL+VYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL
Sbjct: 1   MENKALVVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           SLLLAHITLN ATGCFCCFAAPRSS+SKWRIALICYVISWITFAKAFIMLLTGAALNDQR
Sbjct: 61  SLLLAHITLNFATGCFCCFAAPRSSISKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120

Query: 121 GEQSYFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQANI 180
           GEQSYFLGYCYVLRSGFF +ATIVAT+SIVLGLAYYILLNS ETEPSVFGNPCIPPQANI
Sbjct: 121 GEQSYFLGYCYVLRSGFFIMATIVATVSIVLGLAYYILLNSTETEPSVFGNPCIPPQANI 180

Query: 181 AMGQPQFPPPPQRSADPVFVPEDTYLRRQFT 212
           AMGQPQFPPPP RSADPVFVPEDTY+RRQFT
Sbjct: 181 AMGQPQFPPPPHRSADPVFVPEDTYMRRQFT 211

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BLAST of Carg08052 vs. NCBI nr
Match: XP_022984726.1 (uncharacterized protein LOC111482918 [Cucurbita maxima])

HSP 1 Score: 397.5 bits (1020), Expect = 2.8e-107
Identity = 202/211 (95.73%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           ME KAL+VYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL
Sbjct: 1   MEKKALVVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           SLLLAHITLNVATGCFCCF+APRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR
Sbjct: 61  SLLLAHITLNVATGCFCCFSAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120

Query: 121 GEQSYFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQANI 180
           GEQSYFLG+CYVLRSGFFTVATIVAT+SIVLGLAYYILLNSAE EPSVFGNPCIPPQANI
Sbjct: 121 GEQSYFLGFCYVLRSGFFTVATIVATVSIVLGLAYYILLNSAENEPSVFGNPCIPPQANI 180

Query: 181 AMGQPQFPPPPQRSADPVFVPEDTYLRRQFT 212
           AMGQPQFPPPP RSADPVFV EDTY+RRQFT
Sbjct: 181 AMGQPQFPPPPHRSADPVFVHEDTYMRRQFT 211

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BLAST of Carg08052 vs. NCBI nr
Match: XP_022140830.1 (uncharacterized protein LOC111011403 [Momordica charantia])

HSP 1 Score: 277.3 bits (708), Expect = 4.2e-71
Identity = 140/216 (64.81%), Postives = 170/216 (78.70%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           ME KA+ V +VV FLGLLV+ATGFAAEGT++KL+ VI V   TC YP+SPA+GLGL AAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           SLL+A +T+NV+TGC CC   PR   SKWR  ++C+VISW TF  AF++LLTGAALND+R
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 GEQSYFLGY--CYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQA 180
           GE+SY+ GY  CYVL+ G F VATI+AT SIVLGL YY++LNSA+  P+V+GNP +PPQA
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMGQPQFP---PPPQRSADPVFVPEDTYLRRQFT 212
           NIAMGQPQFP          DPVFV EDTY+RRQ+T
Sbjct: 181 NIAMGQPQFPXXXXXXXXXGDPVFVHEDTYMRRQYT 216

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BLAST of Carg08052 vs. NCBI nr
Match: XP_022922463.1 (uncharacterized protein LOC111430466 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 4.8e-67
Identity = 137/216 (63.43%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           ME KAL V +VV FLGLL++ATGFAAEGT+VK N V+ V  T CKYP+SPA  LGL AAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           SLLLA I +NV+TGC CC   PR   SKWR A++C+V+SW TF  AF++LLTGAALND R
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 GEQSYFLG--YCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQA 180
            EQS +    YCYVL+ G F VAT+V   S+ LGL YY++LNSA+ +P+V+GNP IPP A
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMGQPQFPP---PPQRSADPVFVPEDTYLRRQFT 212
           NIAM QPQFPP       +ADPVFV EDTY RRQFT
Sbjct: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 216

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BLAST of Carg08052 vs. TAIR10
Match: AT5G17210.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 171.8 bits (434), Expect = 4.5e-43
Identity = 95/216 (43.98%), Postives = 136/216 (62.96%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVV---NRTTCKYPKSPAVGLGLV 60
           ME + +++  V+  LGLL   T F AE T++K + V V    + T C YP+SPA  LG  
Sbjct: 1   MERRKIVMCGVLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFT 60

Query: 61  AALSLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALN 120
           +AL L++A I ++V++GCFCC   P  S S W I+LIC+V+SW TF  AF++LL+GAALN
Sbjct: 61  SALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALN 120

Query: 121 DQRGEQSYFLG--YCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIP 180
           D+  E+S   G  +CY+++ G F+   +++ ++I LG+ YY+ L S +   +        
Sbjct: 121 DEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAA----TTT 180

Query: 181 PQANIAMGQPQFPPPPQRSADPVFVPEDTYLRRQFT 212
               IAMGQPQ    P+R  DPVFV EDTY+RRQFT
Sbjct: 181 QGTGIAMGQPQI---PERVEDPVFVHEDTYMRRQFT 209

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BLAST of Carg08052 vs. TAIR10
Match: AT2G32280.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 45/162 (27.78%), Postives = 77/162 (47.53%), Query Frame = 0


Query: 6   LLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAALSLLLA 65
           +LV  V+V L +     G  AE  + ++ H+ +     C+ P   A  LGL AA  L++A
Sbjct: 7   ILVCLVIVGLDVAAAILGIQAEVAQNQVKHMRLW-LFECREPSQDAFRLGLGAAAILVMA 66

Query: 66  HITLNVATGCFCCFAAP--RSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQRGEQ 125
           H+ LN+  GC C  +    + S S  +I++ C V++WI FA  F  ++ G   N +    
Sbjct: 67  HVLLNLVGGCLCICSQDEFQRSSSTRQISMACLVLTWIVFAVGFGSIVIGTMSNSKSRSS 126

Query: 126 SYFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETE 166
                 C      F ++  I+  +  +  +AYY+   +A+ E
Sbjct: 127 ------CGFTHHHFLSIGGILCFLHALFCVAYYVSATAAKDE 161

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BLAST of Carg08052 vs. TAIR10
Match: AT1G13380.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 54.7 bits (130), Expect = 8.1e-08
Identity = 51/169 (30.18%), Postives = 74/169 (43.79%), Query Frame = 0


Query: 2   ENKA-LLVYTVVVFLGLLVIATGFAAEGTKV--KLNHVIVVNRTTCKYPKSPAVGLGLVA 61
           E KA  LV+ +VV L L+      AAE  +   K     + N T C Y    A G G+ A
Sbjct: 3   EGKASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGA 62

Query: 62  ALSLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALND 121
            L LL +   L   T C  CF  P +  S    ++I ++ SW+TF  A   ++ GA  N 
Sbjct: 63  FLFLLSSESLLMSVTKCM-CFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNA 122

Query: 122 QRGEQ-SYFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEP 167
              +  S     C  LR G F    +    ++VL + YY+    + + P
Sbjct: 123 YHTKYLSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSP 170

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BLAST of Carg08052 vs. TAIR10
Match: AT4G21310.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06
Identity = 45/169 (26.63%), Postives = 79/169 (46.75%), Query Frame = 0


Query: 6   LLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAALSLLLA 65
           +L+  + V  G+L    G  AE  + K+ H + +    C+ P   A   GL A + L+LA
Sbjct: 11  ILILAMDVSAGIL----GIEAEIAQNKVKH-LKMWIFECRDPSYTAFKYGLAACILLVLA 70

Query: 66  HITLNVATGCFCCFA---APRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQRGE 125
           H+T N   GC C  +     +SS +K ++A+   + +WI  A AF ML+ G   N +  +
Sbjct: 71  HVTANFLGGCLCVASRQDLEKSSANK-QLAVASLIFTWIILAIAFSMLIVGTMANSRSRK 130

Query: 126 QSYFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGN 172
                  C +      ++  I+  +  +  +AYYI   ++  E +  G+
Sbjct: 131 N------CGISHHRVLSIGGILCFVHGLFAVAYYISATASTREQTSAGH 167

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BLAST of Carg08052 vs. TAIR10
Match: AT1G68220.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-06
Identity = 46/163 (28.22%), Postives = 71/163 (43.56%), Query Frame = 0


Query: 8   VYTVVVFLGLLVIATGFAAEGTKVKLNHV--IVVNRTTCKYPKSPAVGLGLVAALSLLLA 67
           + TVV  L LL     F AE  +     V      +T CKY    +   G+ A   LL++
Sbjct: 7   ILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLLLVS 66

Query: 68  HITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQRGE-QS 127
              +N  T C C      +  S    A++ +V+SW++F  A   LL G+A N    + + 
Sbjct: 67  QAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTKSEG 126

Query: 128 YFLG---YCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAET 165
            + G    C VL  G F        MS++  + YY+  + A+T
Sbjct: 127 IYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKADT 169

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BLAST of Carg08052 vs. TrEMBL
Match: tr|A0A0A0KU80|A0A0A0KU80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.3e-60
Identity = 130/218 (59.63%), Postives = 162/218 (74.31%), Query Frame = 0


Query: 1   MENK-ALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAA 60
           ME K AL+V  VV  LG+++IATGFAAE T+ K N V  V    CKYP+SPA+GLGL AA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQ 120
           LSLL A IT+  +TGC CC   PR   SKWR A+IC+ ISW+T+  AF++ LTGAALN+ 
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RGEQ-SYFLGY-CYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPS-VFGNPCIPP 180
           RGEQ +YF  Y CYVL+ G F+ ATIV   S+ LG++Y+++LNSA+ +PS V+G+P +PP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 QANIAMGQPQFPPP---PQRSADPVFVPEDTYLRRQFT 212
           Q NIAM QPQFP P    QR+ADPVFV EDTY+RRQFT
Sbjct: 181 QPNIAMAQPQFPNPXXXXQRTADPVFVHEDTYMRRQFT 218

[Close]

BLAST of Carg08052 vs. TrEMBL
Match: tr|A0A067EBD4|A0A067EBD4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028344mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 116/213 (54.46%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           ME K L + + V  LGLL  ATGF AE T++K + V + + T C YP+SPA+GLGL AAL
Sbjct: 1   MERKVLALCSTVGLLGLLSAATGFGAEATRIKGSQVQITSPTQCSYPRSPALGLGLTAAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           SLL+A +T+NVATGC CC   P  S S W IAL+C+V+SW TF  AF++LLTGAALNDQ 
Sbjct: 61  SLLIAQVTINVATGCICCRRGPHPSNSNWTIALVCFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 GEQSYFLG--YCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQA 180
           GE+S + G  YCYV++ G F    +++  S+ LG+ YY+ L+SA+    ++GN  +P + 
Sbjct: 121 GEESMYFGNYYCYVVKPGVFAGGAVLSLASVTLGILYYLTLHSAKNS-GLWGNSSVPQEG 180

Query: 181 NIAMGQPQFPPPPQRSADPVFVPEDTYLRRQFT 212
            IAMGQPQF  PPQR+ +PVFV EDTY+RRQFT
Sbjct: 181 GIAMGQPQF--PPQRTQEPVFVHEDTYMRRQFT 210

[Close]

BLAST of Carg08052 vs. TrEMBL
Match: tr|A0A2I4FBB6|A0A2I4FBB6_9ROSI (uncharacterized protein LOC108997226 OS=Juglans regia OX=51240 GN=LOC108997226 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.3e-56
Identity = 113/213 (53.05%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           ME K +++  VV FLGLL  ATGFAAE T++K + V   + + C YP+SPA+ LGL AAL
Sbjct: 1   MERKVVVICCVVGFLGLLSAATGFAAEATRIKGSQVQFPSPSQCVYPRSPAMALGLTAAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           +L++AHI LNV+TGC CC  +P  S S WR+AL+C+V SW TF  AF++LLTGAALNDQ 
Sbjct: 61  ALMIAHIILNVSTGCICCRRSPNPSASNWRVALVCFVFSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 GEQSYFLG--YCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQA 180
           GE+S + G  YCYV++ G F     ++  S++LG+ YY+ L   +   + +GN  +P Q 
Sbjct: 121 GEESMYFGNYYCYVVKPGVFVGGAFLSLASVILGILYYLTLTLVKNSNNPWGNSAVPNQG 180

Query: 181 NIAMGQPQFPPPPQRSADPVFVPEDTYLRRQFT 212
            IAMGQPQFPP  Q + +PVFV EDTY+RRQFT
Sbjct: 181 GIAMGQPQFPPQTQSTHEPVFVHEDTYVRRQFT 213

[Close]

BLAST of Carg08052 vs. TrEMBL
Match: tr|A0A2P4MSR7|A0A2P4MSR7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_63886 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.1e-54
Identity = 116/214 (54.21%), Postives = 148/214 (69.16%), Query Frame = 0


Query: 1   MENKALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAAL 60
           ME K LL+  V  FLGLL  ATGF AEGT++K + V V   + C YP+SPA+ LGL +AL
Sbjct: 1   MERKVLLICFVAGFLGLLSAATGFGAEGTRIKSSQVQVTAISECVYPRSPAMALGLTSAL 60

Query: 61  SLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQR 120
           SL++A I +NV+TGC CC   P  S S W +ALIC+V+SW TF  AF++LLTGAALNDQ 
Sbjct: 61  SLMIAQIIINVSTGCICCKRNPHPSNSNWTVALICFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 GEQS-YFLGYCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPSVFGNPCIPPQAN 180
           G++S YF  YCYV++ G F    +++  S+ LG+ YY+ L SA+   S++GN  IP Q  
Sbjct: 121 GDESAYFNYYCYVVKPGVFAGGAMLSLASVALGIIYYLTLISAKNGDSLWGNTSIPNQGG 180

Query: 181 IAMGQPQFPP--PPQRSADPVFVPEDTYLRRQFT 212
           IAMGQPQ P   P   + DPVFV EDTY+RRQFT
Sbjct: 181 IAMGQPQIPSGLPQSSTQDPVFVHEDTYMRRQFT 214

[Close]

BLAST of Carg08052 vs. TrEMBL
Match: tr|A0A1S3BX72|A0A1S3BX72_CUCME (uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 121/220 (55.00%), Postives = 153/220 (69.55%), Query Frame = 0


Query: 1   MENK-ALLVYTVVVFLGLLVIATGFAAEGTKVKLNHVIVVNRTTCKYPKSPAVGLGLVAA 60
           ME K AL+V  VV FLG+++IATGFAAE T+ K   V  V    CKYP+SPA+GLG  AA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAHITLNVATGCFCCFAAPRSSVSKWRIALICYVISWITFAKAFIMLLTGAALNDQ 120
           LSLL A IT+  +TGC CC   PR    KWR A+IC+ +SWIT+  AF++ LTGAALN+ 
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRP--PKWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RGEQSYFLG--YCYVLRSGFFTVATIVATMSIVLGLAYYILLNSAETEPS-VFGNPCIPP 180
           R +Q  +LG   CYVL+ G F+ ATIV   S+ LG++Y+++LNSA+ +PS V+G+P +PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 QANIAMGQPQFP-----PPPQRSADPVFVPEDTYLRRQFT 212
           Q NIAM QPQFP            DPVFV EDTY+RRQFT
Sbjct: 181 QPNIAMAQPQFPNXXXXXXXXXXXDPVFVHEDTYMRRQFT 218

The following BLAST results are available for this feature:

BLAST of Carg08052 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942637.1	2.7e-110	98.10	uncharacterized protein LOC111447615 [Cucurbita moschata]	[more]
XP_023542651.1	3.3e-108	95.73	uncharacterized protein LOC111802489 [Cucurbita pepo subsp. pepo]	[more]
XP_022984726.1	2.8e-107	95.73	uncharacterized protein LOC111482918 [Cucurbita maxima]	[more]
XP_022140830.1	4.2e-71	64.81	uncharacterized protein LOC111011403 [Momordica charantia]	[more]
XP_022922463.1	4.8e-67	63.43	uncharacterized protein LOC111430466 [Cucurbita moschata]	[more]

BLAST of Carg08052 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17210.1	4.5e-43	43.98	Protein of unknown function (DUF1218)	[more]
AT2G32280.1	1.2e-08	27.78	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	8.1e-08	30.18	Protein of unknown function (DUF1218)	[more]
AT4G21310.1	1.5e-06	26.63	Protein of unknown function (DUF1218)	[more]
AT1G68220.1	4.4e-06	28.22	Protein of unknown function (DUF1218)	[more]

BLAST of Carg08052 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08052 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KU80\|A0A0A0KU80_CUCSA	1.3e-60	59.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1	[more]
tr\|A0A067EBD4\|A0A067EBD4_CITSI	1.9e-56	54.46	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028344mg PE=4 SV=1	[more]
tr\|A0A2I4FBB6\|A0A2I4FBB6_9ROSI	3.3e-56	53.05	uncharacterized protein LOC108997226 OS=Juglans regia OX=51240 GN=LOC108997226 P...	[more]
tr\|A0A2P4MSR7\|A0A2P4MSR7_QUESU	9.1e-54	54.21	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_63886 PE=4 SV=1	[more]
tr\|A0A1S3BX72\|A0A1S3BX72_CUCME	1.2e-53	55.00	uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08052-RA	Carg08052-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 58..148 e-value: 1.9E-20 score: 73.1
None	No IPR available	PANTHER	PTHR31769:SF8	SUBFAMILY NOT NAMED	coord: 2..185
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 2..185

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08052	Cla003588	Watermelon (97103) v1	carwmB0374
Carg08052	Cla010685	Watermelon (97103) v1	carwmB0369
Carg08052	Csa4G025740	Cucumber (Chinese Long) v2	carcuB0403
Carg08052	MELO3C017618	Melon (DHL92) v3.5.1	carmeB0384
Carg08052	ClCG07G017290	Watermelon (Charleston Gray)	carwcgB0373
Carg08052	ClCG01G005010	Watermelon (Charleston Gray)	carwcgB0367
Carg08052	CSPI04G04390	Wild cucumber (PI 183967)	carcpiB0408
Carg08052	Cucsa.093840	Cucumber (Gy14) v1	carcgyB0431
Carg08052	CmaCh16G002360	Cucurbita maxima (Rimu)	carcmaB0526
Carg08052	CmaCh04G003790	Cucurbita maxima (Rimu)	carcmaB0529
Carg08052	CmoCh04G004000	Cucurbita moschata (Rifu)	carcmoB0514
Carg08052	CmoCh16G002540	Cucurbita moschata (Rifu)	carcmoB0509
Carg08052	Lsi09G005280	Bottle gourd (USVL1VR-Ls)	carlsiB339
Carg08052	Lsi07G001450	Bottle gourd (USVL1VR-Ls)	carlsiB347
Carg08052	Cp4.1LG01g03260	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08052	Cp4.1LG14g05200	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08052	CsGy4G004300	Cucumber (Gy14) v2	carcgybB0382
Carg08052	MELO3C017618.2	Melon (DHL92) v3.6.1	carmedB0388
Carg08052	CsaV3_4G004490	Cucumber (Chinese Long) v3	carcucB0405
Carg08052	Cla97C07G144300	Watermelon (97103) v2	carwmbB0400
Carg08052	Bhi01G001973	Wax gourd	carwgoB0460

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08052	Carg16777	Silver-seed gourd	carcarB406

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08052	Bottle gourd (USVL1VR-Ls)	carlsiB341
Carg08052	Watermelon (97103) v1	carwmB0367
Carg08052	Wax gourd	carwgoB0456