Carg16777 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16777
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function (DUF1218)
Location	Cucurbita_argyrosperma_scaffold_087 : 449556 .. 451643 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGGACGCAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTATCGAAATCTCGGCCTTAATCCGAAGCTCCACCGAAACACGCAGGTTATTTCTCCCAGTAACTAGCCGGAAACTATCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTTTTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGTGAGATGCCTTTTCTTAACAATCACGTATTGATTTAGTGATTTTTCTTCGGTGAATTATCTGTTTGGCTGATGAGAAAATCCGTCAGAAAGAATGTGAAAGGATAGCGAGAGGAGATTCATTTTGAATAGCGATTTATAAAAAGAAGTTGTTCGTGAATGGATCTGTTGTTTTTGGCTGCTTCCTTTAAGCTGTATTTGTTTCCAAGCCCTACTGAATTGATCATCTTCTTTGTTTTTGAGGTTGAGGCCATAAACTTCCAATTATATGCAAGCGATTCAAGTAATAGTTAGAGAATTGATAATAATTTTGTTTGTGATTTTCTATTTTAGAAGTTAAGCAAATTGAGTGACAGTTTTTTCACTTTAATTTTGGTTCATAATTAGAATTTGGTTTGGTTTAAAAAAAATTACATAATTTCCAATTTGTCCCTGAAATTTAAATTTCCTCGAGTTTTAATTTTGAGAGATGCTCGTTATGGTCTTGAGTTGTTTGAAGTTACTAATTCAGGACATAGTTCTTTGGAATTTTGTGTGGGATCGTAGCCTGATAAGTCTGGTCATTTTTTCATTTGACAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAGAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTCGTTTCGTGGTACTTTTCGACCCTTCCTTCCTCATTCTAGCTTGCATTTAGTTCATGGCTTGATGCTTGCTGCTTGCTGCTTGCTGCTTGCTGCTATAATATGAGATGAATTATATGAATGTCGATATCGAAACCCGTTTTCTCAAGATTGCAGGGTTATTCGAATTCTGCTTGGGTTCTTGATGGCTGAGTGTTATGATATTGTTTGTGATTATATGATCTTATTTCTGCTTTGAAACACTTCCATGTTTTTGTTGTCATCTTTTTGGCTCTTCTGCATTGTTAATTCACTATGAAAGTTGTGTTAGACTTCTTAATCCATGATCATTACAGTTGAAATGATTGAATCTATTGTTCTTGGTGAATCCCTTTGGTCGAATTATTCCACGACTAAAAGAAAGATCGATTCCTTGTGTTTGTCGGATAAATTGAGTTTGAGCCATGGCTTTTTTTCTGCAGGTTTACATTTGTGATAGCGTTTCTCCTGTTGCTAACCGGTGCTGCACTGAACGATGGAAGGAATGAACAAAGCAGCTATTTCAATTACTACTATTGCTATGTTCTCAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATCGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTTGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGTAAGCGTCGGTCGATATCAAATGTGTTTAAGAAAACCATACAACTTATACGACTTGATTGATGTTGTCTTTATAGGAAGTAGCTGTTGTGGACTTGTATAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACACTTTTATCATTGATGCATTTTATGT

mRNA sequence

ATCGGACGCAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTATCGAAATCTCGGCCTTAATCCGAAGCTCCACCGAAACACGCAGGTTATTTCTCCCAGTAACTAGCCGGAAACTATCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTTTTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAGAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTCGTTTCGTGGTTTACATTTGTGATAGCGTTTCTCCTGTTGCTAACCGGTGCTGCACTGAACGATGGAAGGAATGAACAAAGCAGCTATTTCAATTACTACTATTGCTATGTTCTCAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATCGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTTGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGTAAGCGTCGGTCGATATCAAATGTGTTTAAGAAAACCATACAACTTATACGACTTGATTGATGTTGTCTTTATAGGAAGTAGCTGTTGTGGACTTGTATAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACACTTTTATCATTGATGCATTTTATGT

Coding sequence (CDS)

ATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTTTTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAGAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTCGTTTCGTGGTTTACATTTGTGATAGCGTTTCTCCTGTTGCTAACCGGTGCTGCACTGAACGATGGAAGGAATGAACAAAGCAGCTATTTCAATTACTACTATTGCTATGTTCTCAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATCGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTTGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGA

Protein sequence

MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGRNEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT

Homology

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BLAST of Carg16777 vs. NCBI nr
Match: XP_022922463.1 (uncharacterized protein LOC111430466 [Cucurbita moschata])

HSP 1 Score: 421.0 bits (1081), Expect = 2.4e-114
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYF+YYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
           NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 216

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BLAST of Carg16777 vs. NCBI nr
Match: XP_023551924.1 (uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.0 bits (1068), Expect = 7.8e-113
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVA LGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN GR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120

Query: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYF+YYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
           NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 216

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BLAST of Carg16777 vs. NCBI nr
Match: XP_022140830.1 (uncharacterized protein LOC111011403 [Momordica charantia])

HSP 1 Score: 340.5 bits (872), Expect = 4.2e-90
Identity = 170/216 (78.70%), Postives = 187/216 (86.57%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKA+AVCSVVAFLGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALND R
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF YY CYVLKPGVFAVAT++  AS+ LGLFYYLILNSAKN+P VWGNPS+PP A
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
           NIAM QPQFP XXX      DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMGQPQFPXXXXXXXXXGDPVFVHEDTYMRRQYT 216

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BLAST of Carg16777 vs. NCBI nr
Match: XP_004146885.1 (PREDICTED: uncharacterized protein LOC101221478 [Cucumis sativus] >KGN53195.1 hypothetical protein Csa_4G025740 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 5.1e-80
Identity = 158/218 (72.48%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVA LG++++ATGFAAE TR K NQV +V P +CKYP+SPA  LGLTAA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDG 120
           LSLL AQI I  STGC+CC RGPRPPASKWRTAV+CF +SW T+VIAFLL LTGAALN+G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R EQ +YF  Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQFP  XX    TADPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPXXXXQRTADPVFVHEDTYMRRQFT 218

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BLAST of Carg16777 vs. NCBI nr
Match: XP_008453825.1 (PREDICTED: uncharacterized protein LOC103494435 [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 4.9e-75
Identity = 154/220 (70.00%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVAFLG++++ATGFAAE TR KG QV +V P +CKYP+SPA  LG TAA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDG 120
           LSLL AQI I  STGC+CC RGPRPP  KWRTAV+CF VSW T+VIAFLL LTGAALN+G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R++Q +Y   Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFP--PXXXAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQFP   XXX      DPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNXXXXXXXXXXXDPVFVHEDTYMRRQFT 218

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BLAST of Carg16777 vs. TAIR10
Match: AT5G17210.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 204.9 bits (520), Expect = 5.0e-53
Identity = 110/219 (50.23%), Postives = 141/219 (64.38%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQV---VQVTPTMCKYPQSPAAALGLT 60
           MER+ + +C V+  LGLL   T F AE TR+K +QV   V  + T C YP+SPA  LG T
Sbjct: 1   MERRKIVMCGVLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFT 60

Query: 61  AALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN 120
           +AL L++AQI+++VS+GC CC +GP P  S W  +++CFVVSWFTFVIAFL+LL+GAALN
Sbjct: 61  SALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALN 120

Query: 121 DGRNEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIP 180
           D   E+S     Y+CY++KPGVF+   V+   ++ALG+ YYL L S K         +  
Sbjct: 121 DEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAA----TTT 180

Query: 181 PPANIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
               IAM QPQ P          DPVFVHEDTY RRQFT
Sbjct: 181 QGTGIAMGQPQIP------ERVEDPVFVHEDTYMRRQFT 209

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BLAST of Carg16777 vs. TAIR10
Match: AT1G13380.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-11
Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 0


Query: 12  VAFLGLLLVATGF--AAEGTRVKGNQVVQ--VTPTMCKYPQSPAAALGLTAALSLLLAQI 71
           +  + L LVA GF  AAE  R  G  +       T C Y    A   G+ A L LL ++ 
Sbjct: 12  ILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSSES 71

Query: 72  LINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGRNEQSSYF 131
           L+   T C+C  R P  P S    +++ F+ SW TF++A   ++ GA  N    +  S  
Sbjct: 72  LLMSVTKCMCFGR-PLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKYLS-S 131

Query: 132 NYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDP 169
             + C  L+ G+F    V   A++ L ++YY+    + + P
Sbjct: 132 QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSP 170

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BLAST of Carg16777 vs. TAIR10
Match: AT1G61065.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 44  CKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASK-WRTAVVCFVVSWFT 103
           C Y +  A  LG+ + L LL +Q+LI V++ C+CC R   P  S+ W  A+  F+ +W  
Sbjct: 43  CVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRALTPSGSRSW--AIFLFITTWVF 102

Query: 104 FVIAFLLLLTGAALNDGRNEQSSYFNYY--YCYVLKPGVFAVATVVGAASLALGLFYYLI 163
           F IA + LL G+  N    +   YF      C  L+ GVF         +  +   YY+ 
Sbjct: 103 FFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVT 162

Query: 164 LNSAKN 167
           L+ AK+
Sbjct: 163 LSRAKD 166

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BLAST of Carg16777 vs. TAIR10
Match: AT1G68220.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 59/191 (30.89%), Postives = 82/191 (42.93%), Query Frame = 0


Query: 5   ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQV--TPTMCKYPQSPAAALGLTAALSL 64
           ++++ +VV  L LL     F AE  R     V       T+CKY    +   G++A   L
Sbjct: 4   SVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLL 63

Query: 65  LLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGRNE 124
           L++Q ++N  T C+C  +G     S    A+V FVVSW +F+ A   LL G+A N    +
Sbjct: 64  LVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTK 123

Query: 125 QSSYF--NYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 184
               +      C VL  GVFA        SL   + YYL    +K D   W         
Sbjct: 124 SEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLA--HSKADTGGWEKHQ-NDGI 183

Query: 185 NIAMAQPQFPP 192
           NI M  P   P
Sbjct: 184 NIGMTTPSDAP 191

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BLAST of Carg16777 vs. TAIR10
Match: AT4G27435.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08
Identity = 48/161 (29.81%), Postives = 69/161 (42.86%), Query Frame = 0


Query: 8   VCSVVAFLGLLLVATGFAAEGTRVKGN--QVVQVTPTMCKYPQSPAAALGLTAALSLLLA 67
           V ++V    L+      AAE  R      Q  +V    C Y    A   G+ A L  + +
Sbjct: 6   VSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVAS 65

Query: 68  QILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGRNEQSS 127
           QILI + + C CC + P  P      A++ F+VSW  F+IA + LL G+  N    +  +
Sbjct: 66  QILIMLVSRCFCCGK-PLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRT 125

Query: 128 YF--NYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSA 165
            F  N   C  L+ GVFA        +  +  FY     SA
Sbjct: 126 MFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYXXXXXSA 165

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BLAST of Carg16777 vs. TrEMBL
Match: tr|A0A0A0KU80|A0A0A0KU80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.4e-80
Identity = 158/218 (72.48%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVA LG++++ATGFAAE TR K NQV +V P +CKYP+SPA  LGLTAA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDG 120
           LSLL AQI I  STGC+CC RGPRPPASKWRTAV+CF +SW T+VIAFLL LTGAALN+G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R EQ +YF  Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQFP  XX    TADPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPXXXXQRTADPVFVHEDTYMRRQFT 218

[Close]

BLAST of Carg16777 vs. TrEMBL
Match: tr|A0A1S3BX72|A0A1S3BX72_CUCME (uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.3e-75
Identity = 154/220 (70.00%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVAFLG++++ATGFAAE TR KG QV +V P +CKYP+SPA  LG TAA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDG 120
           LSLL AQI I  STGC+CC RGPRPP  KWRTAV+CF VSW T+VIAFLL LTGAALN+G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R++Q +Y   Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFP--PXXXAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQFP   XXX      DPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNXXXXXXXXXXXDPVFVHEDTYMRRQFT 218

[Close]

BLAST of Carg16777 vs. TrEMBL
Match: tr|A0A067EBD4|A0A067EBD4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028344mg PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.4e-72
Identity = 143/216 (66.20%), Postives = 161/216 (74.54%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK LA+CS V  LGLL  ATGF AE TR+KG+QV   +PT C YP+SPA  LGLTAAL
Sbjct: 1   MERKVLALCSTVGLLGLLSAATGFGAEATRIKGSQVQITSPTQCSYPRSPALGLGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLL+AQ+ INV+TGCICC RGP P  S W  A+VCFVVSWFTFVIAFLLLLTGAALND  
Sbjct: 61  SLLIAQVTINVATGCICCRRGPHPSNSNWTIALVCFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF  YYCYV+KPGVFA   V+  AS+ LG+ YYL L+SAKN   +WGN S+P   
Sbjct: 121 GEESMYFGNYYCYVVKPGVFAGGAVLSLASVTLGILYYLTLHSAKNS-GLWGNSSVPQEG 180

Query: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQFPP       T +PVFVHEDTY RRQFT
Sbjct: 181 GIAMGQPQFPP-----QRTQEPVFVHEDTYMRRQFT 210

[Close]

BLAST of Carg16777 vs. TrEMBL
Match: tr|A0A2I4FBB6|A0A2I4FBB6_9ROSI (uncharacterized protein LOC108997226 OS=Juglans regia OX=51240 GN=LOC108997226 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.9e-70
Identity = 137/216 (63.43%), Postives = 159/216 (73.61%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK + +C VV FLGLL  ATGFAAE TR+KG+QV   +P+ C YP+SPA ALGLTAAL
Sbjct: 1   MERKVVVICCVVGFLGLLSAATGFAAEATRIKGSQVQFPSPSQCVYPRSPAMALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           +L++A I++NVSTGCICC R P P AS WR A+VCFV SWFTFVIAFLLLLTGAALND  
Sbjct: 61  ALMIAHIILNVSTGCICCRRSPNPSASNWRVALVCFVFSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF  YYCYV+KPGVF     +  AS+ LG+ YYL L   KN  N WGN ++P   
Sbjct: 121 GEESMYFGNYYCYVVKPGVFVGGAFLSLASVILGILYYLTLTLVKNSNNPWGNSAVPNQG 180

Query: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQFPP      +T +PVFVHEDTY RRQFT
Sbjct: 181 GIAMGQPQFPP---QTQSTHEPVFVHEDTYVRRQFT 213

[Close]

BLAST of Carg16777 vs. TrEMBL
Match: tr|A0A2P4MSR7|A0A2P4MSR7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_63886 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.1e-70
Identity = 140/216 (64.81%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERK L +C V  FLGLL  ATGF AEGTR+K +QV     + C YP+SPA ALGLT+AL
Sbjct: 1   MERKVLLICFVAGFLGLLSAATGFGAEGTRIKSSQVQVTAISECVYPRSPAMALGLTSAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SL++AQI+INVSTGCICC R P P  S W  A++CFVVSWFTFVIAFLLLLTGAALND  
Sbjct: 61  SLMIAQIIINVSTGCICCKRNPHPSNSNWTVALICFVVSWFTFVIAFLLLLTGAALNDQH 120

Query: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            ++S+YFN YYCYV+KPGVFA   ++  AS+ALG+ YYL L SAKN  ++WGN SIP   
Sbjct: 121 GDESAYFN-YYCYVVKPGVFAGGAMLSLASVALGIIYYLTLISAKNGDSLWGNTSIPNQG 180

Query: 181 NIAMAQPQFPPXXXAQPTTADPVFVHEDTYTRRQFT 217
            IAM QPQ  P    Q +T DPVFVHEDTY RRQFT
Sbjct: 181 GIAMGQPQI-PSGLPQSSTQDPVFVHEDTYMRRQFT 214

The following BLAST results are available for this feature:

BLAST of Carg16777 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922463.1	2.4e-114	99.54	uncharacterized protein LOC111430466 [Cucurbita moschata]	[more]
XP_023551924.1	7.8e-113	98.61	uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo]	[more]
XP_022140830.1	4.2e-90	78.70	uncharacterized protein LOC111011403 [Momordica charantia]	[more]
XP_004146885.1	5.1e-80	72.48	PREDICTED: uncharacterized protein LOC101221478 [Cucumis sativus] >KGN53195.1 hy...	[more]
XP_008453825.1	4.9e-75	70.00	PREDICTED: uncharacterized protein LOC103494435 [Cucumis melo]	[more]

BLAST of Carg16777 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17210.1	5.0e-53	50.23	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	8.0e-11	29.81	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.2e-09	32.54	Protein of unknown function (DUF1218)	[more]
AT1G68220.1	2.0e-09	30.89	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	1.7e-08	29.81	Protein of unknown function (DUF1218)	[more]

BLAST of Carg16777 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg16777 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KU80\|A0A0A0KU80_CUCSA	3.4e-80	72.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1	[more]
tr\|A0A1S3BX72\|A0A1S3BX72_CUCME	3.3e-75	70.00	uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=...	[more]
tr\|A0A067EBD4\|A0A067EBD4_CITSI	4.4e-72	66.20	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028344mg PE=4 SV=1	[more]
tr\|A0A2I4FBB6\|A0A2I4FBB6_9ROSI	1.9e-70	63.43	uncharacterized protein LOC108997226 OS=Juglans regia OX=51240 GN=LOC108997226 P...	[more]
tr\|A0A2P4MSR7\|A0A2P4MSR7_QUESU	7.1e-70	64.81	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_63886 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16777-RA	Carg16777-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 58..150 e-value: 8.7E-26 score: 90.2
None	No IPR available	PANTHER	PTHR31769:SF8	SUBFAMILY NOT NAMED	coord: 2..187
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 2..187

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16777	Cla010685	Watermelon (97103) v1	carwmB0873
Carg16777	Csa4G025740	Cucumber (Chinese Long) v2	carcuB0886
Carg16777	MELO3C017618	Melon (DHL92) v3.5.1	carmeB0862
Carg16777	ClCG07G017290	Watermelon (Charleston Gray)	carwcgB0848
Carg16777	CSPI04G04390	Wild cucumber (PI 183967)	carcpiB0906
Carg16777	Cucsa.093840	Cucumber (Gy14) v1	carcgyB0992
Carg16777	CmaCh04G003790	Cucurbita maxima (Rimu)	carcmaB1209
Carg16777	CmaCh16G002360	Cucurbita maxima (Rimu)	carcmaB1206
Carg16777	CmoCh04G004000	Cucurbita moschata (Rifu)	carcmoB1177
Carg16777	CmoCh16G002540	Cucurbita moschata (Rifu)	carcmoB1175
Carg16777	Lsi07G001450	Bottle gourd (USVL1VR-Ls)	carlsiB792
Carg16777	Cp4.1LG14g05200	Cucurbita pepo (Zucchini)	carcpeB1215
Carg16777	Cp4.1LG01g03260	Cucurbita pepo (Zucchini)	carcpeB1216
Carg16777	CsGy4G004300	Cucumber (Gy14) v2	carcgybB0860
Carg16777	MELO3C017618.2	Melon (DHL92) v3.6.1	carmedB0872
Carg16777	CsaV3_4G004490	Cucumber (Chinese Long) v3	carcucB0910
Carg16777	Cla97C01G005240	Watermelon (97103) v2	carwmbB0908
Carg16777	Cla97C07G144300	Watermelon (97103) v2	carwmbB0911
Carg16777	Bhi01G001973	Wax gourd	carwgoB1020

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16777	Carg08052	Silver-seed gourd	carcarB406

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16777	Silver-seed gourd	carcarB407
Carg16777	Cucurbita maxima (Rimu)	carcmaB1210
Carg16777	Cucurbita moschata (Rifu)	carcmoB1178
Carg16777	Cucurbita pepo (Zucchini)	carcpeB1217