Cp4.1LG09g04310 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGCCGAGAGGCCCAAACCAAGAGCAGCAGCCCAAGATTCGGAACCAGTTCTCAGAGACTCAGACAAAGAGTAGAAGAATAGACGCTGATATCTGTGTTTTGAGCTCTCAACGAATTCCCCTCTTGCAGTTCCCATTGATTTTCTTTCCTCTGCGAAATCCGGCGGAAAAATGAGCGGTACCGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCATCTCTCCAGACCAAGTTCAGCCAGGTCCGGAAATTCTTGTTTTTTTTCTTTCGTTGTTTTCGTAGTCGCTGGATCTTTGTTTTTATCTGAATTGATTCTTGTTGAAGTGGATTTGATTTTTGTTTGGCTTGAATGTTTGAGATTGTGTTTTTCGGAATTTGTTTTTTGTTCTTATGTTTAATTTCCTTCATTTCTTGTGAATCCGGAGTTGTTTACTAACTACAATCGCAATATTTCGTTTATTATGGGTCGTAAATAGGGGAATGTTGATTTACTTGTGGTATTATCGAAGGAAGATCGTTCGGAGAAGAATGGAATTTAGAAAACAGAAATGTTTTTCGTTGTAAAGCCAACATTTTCAACTTGTTTGGATCTAGAAACTGTTAGATACATAAGATGACAGGAACATGATATATGATTCATTATTACAGCAATTCTAATGTCTCTGGTAAAATTGGCTGGGCTATGTCTATTTTATACGAAATGGCAAATCATATGTATTGGTATCTGGTCTGGAATACCCATTTCATACAGTTTGTGCAACTGGGAGTGTTGGAACATAGCTCATAGTAAGATGCTAATGCTTCTCCTATGATTTATAGGCTTAAATCACTCTTTTGTTCGTAATGAAATAGTTGTTTTTTCAGAAAAAGAAGTGCAATTGGAAGCCGAATCGATAGAATGATCGTGTTAATTTTGTGCTTTTCTTTTGTATCAGTCAACAAAATTTTCATATTAATGACTAAAGCGTGCTTTTAATTTTGTGGCCGTAGATAGAATGAAGTACTCTATTGGGCTGCCTTAATTACTCTGCTCAATACTTTCAAGATCTGCATTATTTTTAAACTGTTTATCTCCGTTCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGTATGCTCTCTGATTCACTTGTCTTTTCAAGTTCATACTTCGATTTTTCTGTGCAATATTATGAGGCAATATTGTGATTTTTTCAGCACCTGGCTTACCTGTGATACTTCTCTAATTTGGATTCTCAATGATAACTTTTCTTGACTAAGTAGTCTTTCGGAACCACAATCGTACAATAAGTACATTGTATAATTTGAGATTTTTGGATGTAGACTTCTGGGGCGCATTGGCAAATCTGTCACTAAATTTTTTAAGTGGCCCTTTTGTCTCAGTGGATGTCACACTATCCTATTACTTGTTCATGTTCACCACCGATGATCGTGTTGGGGGAAATCCTGTGATTGAAGTATTTACAGCATTTTCTTTTATATTGGAACACATTTGGCCTTTTAGTTGGTGTAACTTAAATGTCTTCTGAAGTACTCGTTCTAATAGCCTGAAAATCTTGTCGTTGTAACGTTTGCGTGGTAAATAATAAGGCTGGCTATGAATTTAGCTTTCCCCTTTCACTCTCATGAGACCAGACTATGTCATCAAGATTCGGGGACAGATTAAGCATGGTTTTGGACTGTCATTAATGTACAAAGCAATGCCCTTATGATTGCTTGCTTTTTTTTTTTATCATTACGCCATCGGTTGACCTGCTTCCTTTTTAGGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGGTAAGCACCACATATGTAGTTATATCTTAGTATATCTCTTTGTAGCTCCCCGCTAGGCGCTTGATTTATTGTTCATGTGGCAGCTGGTAGAATTGAAGGAAGCTGAAGTGAAATCCCTGAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGGTAATAGACAAGAATAGCTCACTTGATTTCCCATTTTTTAGGAATGATGAATCCTCACTGCTTGTTGTTCTCATCAGAAAAAGATCAGCACCATGACTGCTGACGAGTACTTCGAGAAGCATCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGACCGCAAATTACTGGTTGAAGCGCCAAAGTTTCACAATTTAATTTCGTAAATCTTCCGGGTCTTGTTTTGCTGCAGCTGTTTGGTCAGTAATAAAACAAACAAGATAGTTCTCCTCCAATTTGGGTGCATTTGCTTTCCAAATCACGTTGACAAAATTGATTAGAAAGACTGAGATTTTCCTTGAGATGATGTTGTGAGAGTTCCAAATCACTCGTGGTACATTATCATAGCAAATGCATTTTTTTATAATGAGATTATTGTGTTATTTCAGCAAGTTTTCTTATCATTCCGATATTAATGAAGATCGGGGCTCCGTACCATGCCTCATTTCATAGAGAAC TGGGCCGAGAGGCCCAAACCAAGAGCAGCAGCCCAAGATTCGGAACCAGTTCTCAGAGACTCAGACAAAGAGCTCTCAACGAATTCCCCTCTTGCAGTTCCCATTGATTTTCTTTCCTCTGCGAAATCCGGCGGAAAAATGAGCGGTACCGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCATCTCTCCAGACCAAGTTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGCTGGTAGAATTGAAGGAAGCTGAAGTGAAATCCCTGAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGACGAGTACTTCGAGAAGCATCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGACCGCAAATTACTGGTTGAAGCGCCAAAGTTTCACAATTTAATTTCGTAAATCTTCCGGGTCTTGTTTTGCTGCAGCTGTTTGGTCAGTAATAAAACAAACAAGATAGTTCTCCTCCAATTTGGGTGCATTTGCTTTCCAAATCACGTTGACAAAATTGATTAGAAAGACTGAGATTTTCCTTGAGATGATGTTGTGAGAGTTCCAAATCACTCGTGGTACATTATCATAGCAAATGCATTTTTTTATAATGAGATTATTGTGTTATTTCAGCAAGTTTTCTTATCATTCCGATATTAATGAAGATCGGGGCTCCGTACCATGCCTCATTTCATAGAGAAC ATGAGCGGTACCGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCATCTCTCCAGACCAAGTTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATGCGTTGCTGGTAGAATTGAAGGAAGCTGAAGTGAAATCCCTGAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGACGAGTACTTCGAGAAGCATCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGA MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKESERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
BLAST of Cp4.1LG09g04310 vs. Swiss-Prot
Match: ATP5H_ARATH (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana GN=At3g52300 PE=1 SV=3) HSP 1 Score: 282.3 bits (721), Expect = 3.4e-75 Identity = 138/168 (82.14%), Postives = 156/168 (92.86%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. TrEMBL
Match: A0A0A0KRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623540 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.1e-84 Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. TrEMBL
Match: E5GCK9_CUCME (ATP synthase d chain OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 8.1e-84 Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. TrEMBL
Match: A0A061FUR0_THECC (ATP synthase D chain, mitochondrial OS=Theobroma cacao GN=TCM_043082 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 4.1e-80 Identity = 152/168 (90.48%), Postives = 162/168 (96.43%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. TrEMBL
Match: B9SUN3_RICCO (ATP synthase D chain, mitochondrial, putative OS=Ricinus communis GN=RCOM_0713220 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 4.1e-80 Identity = 151/168 (89.88%), Postives = 163/168 (97.02%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. TrEMBL
Match: B9SK23_RICCO (ATP synthase D chain, mitochondrial, putative OS=Ricinus communis GN=RCOM_1399280 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 7.1e-80 Identity = 151/168 (89.88%), Postives = 162/168 (96.43%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. TAIR10
Match: AT3G52300.1 (AT3G52300.1 ATP synthase D chain, mitochondrial) HSP 1 Score: 282.3 bits (721), Expect = 1.9e-76 Identity = 138/168 (82.14%), Postives = 156/168 (92.86%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: gi|449449330|ref|XP_004142418.1| (PREDICTED: ATP synthase subunit d, mitochondrial [Cucumis sativus]) HSP 1 Score: 319.7 bits (818), Expect = 3.0e-84 Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: gi|659092127|ref|XP_008446913.1| (PREDICTED: ATP synthase subunit d, mitochondrial [Cucumis melo]) HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83 Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: gi|657943430|ref|XP_008368918.1| (PREDICTED: ATP synthase subunit d, mitochondrial [Malus domestica]) HSP 1 Score: 305.8 bits (782), Expect = 4.6e-80 Identity = 152/168 (90.48%), Postives = 163/168 (97.02%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: gi|255577651|ref|XP_002529702.1| (PREDICTED: ATP synthase subunit d, mitochondrial [Ricinus communis]) HSP 1 Score: 305.4 bits (781), Expect = 5.9e-80 Identity = 151/168 (89.88%), Postives = 163/168 (97.02%), Query Frame = 1
BLAST of Cp4.1LG09g04310 vs. NCBI nr
Match: gi|590564704|ref|XP_007009739.1| (ATP synthase D chain, mitochondrial [Theobroma cacao]) HSP 1 Score: 305.4 bits (781), Expect = 5.9e-80 Identity = 152/168 (90.48%), Postives = 162/168 (96.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |