Cp4.1LG08g04970 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g04970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranslationally-controlled tumor protein homolog
LocationCp4.1LG08 : 1236718 .. 1238912 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCTTTTGAAGAAAACCCTATTCTATAAATTCGTTACACTCTCCTGAATCTAATTCTCTTGCGCTCTTTGCCGTACTCTCTAGCCCTTCTCTCGCCCCAGAACAATTCTTTTCTTCAGGAGCTCCGAGAGTAAATTGGGCAATCATGTTGGTTTACCAAGACCTTCTCACTGGTAAATTCTCTAAAATAATGTTTGTTGTTTTCGATTATTTTTGGTTATTTCGATTTATGTTCGTTGTTTTCGATTTATGGAGGTTTGTTTTGGTTATATAATTATTTTTGATTCGGGAGGTTTTTCATTCATGTTATGGAGGTTTGTTTAGGTTATAGGGCTTCGATTTTCCATTGTTGCAGCTTTTTTATGTCTCTGATTTCTATGGATTCTTTGGTTAACTTTCAGATCTGGAACATATTTGTGATTTTATCGATTTTGCTTTAGCTCGTAGTGATCTGATTTATGAGATAGGGTAACAAAATATGCGGTAGCTTTTGGTTAGCTTTTTGTGGGAGAGCGATTGTGGCTTTCTTGTATCAGCTTTCAAATTTGAATGAATATTTACAGTACTTTGAATCAGTATGTTATGATTTGGTTTATTGTTGAAGAGTTTTGTTTTTGGGTCGTAGAATCTAATCCATGAGATTAGAGTTGAGAGCTTCTGTTGTGCTTTAGATGGTTTGATGCTATTGTTAGTAATATTTTTTCTAGTTTGGTGTACATGGATTCGTTCCCTTCATTGGTGACAAAGCAATTGTTTTTAATTTTGATATCAGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGGTCAGTAGATTTTGTTTACTGTATGCTTTTTCACTTTTTCATGGAAAGAAAATGTTGTGTCGTATATAATTACTGAAACTAAGTGTTAGCCAAATTGAATGAGTATTCAGCACAATACTTTACTACTTGAATCATTATGCTGCAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGACGGTGAGGATGAAGGGGTTGATGACCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGTAGGCATACCTTCCGGTTAAGACATTCAAGGATTATTGCAAGTTTTTAATTTAAGGGCATACATGGGAGTGATTTTAAATCTTTCCCAAACTTGACCTAAATCTATTTTTCTTTCCACTTTGGGATTCCAGGAGCAACCTACCATGGACAAGAAGCAATTCATTGCATACATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTGTAAGTACTTCCCTTTGTTTAGGCTATCTTTTATTGGCATTACAAATTTAGTAATAGAAATATTTGAGCTCAACACAGCAAACCAAATCTTACCATTTGTGATCAGTTTGGTTCTTTGTATTTGAACATTGCTCTCGAACACCCTTCCTTTTTTTGAATCGATATGTGTGATAGATGAAACCGGAGCGTTCGAGCTTTTAGTGCTTCTCCTAAAAGCAGCACTTACAGAACCTAGTGTTTTTAGAATTTTCAATATTCTCAAAGTTTTAAGTTTTCTTATCATTAGAATGATTCCTAATTGTATTATATGTTCTTTTGCAGCTTCGTGGGAGAGAGCATGCATGATGATTCCTGCATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCCCCAGCTTTGAAGGAAGTCAAGTGCTGAAAGAACAGAACAAAAGATTGAAGCAGAATGATTCATGTTGCACTCATTGTTTCAACTATATTTGCCTTTTTCTTTTGACGTTTGAATTTGGATAATTTGGAAGATTTGGGCTGTTTTTGTTTTGGTTTATTCTCTGGGGTTTCCTTGTTTTGACCTAATTTACTTGGGAGTTTATGTTCTGATGAGTGCAAATGTTAAACTCTATTTATAAACCTTAGTCGATCTCTACTTTTATAATATCCTGCTTTAGTTATCTTCAAGTAAGCTTCTTTTATTGTGAGATTATTTTGGGGTTGTGATGAACTGTTTCAGTTAATATTCGTTATAATCAGATCTTATTTCGCAA

mRNA sequence

TACCTTTTGAAGAAAACCCTATTCTATAAATTCGTTACACTCTCCTGAATCTAATTCTCTTGCGCTCTTTGCCGTACTCTCTAGCCCTTCTCTCGCCCCAGAACAATTCTTTTCTTCAGGAGCTCCGAGAGTAAATTGGGCAATCATGTTGGTTTACCAAGACCTTCTCACTGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGACGGTGAGGATGAAGGGGTTGATGACCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGAGCAACCTACCATGGACAAGAAGCAATTCATTGCATACATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTCTTCGTGGGAGAGAGCATGCATGATGATTCCTGCATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCCCCAGCTTTGAAGGAAGTCAAGTGCTGAAAGAACAGAACAAAAGATTGAAGCAGAATGATTCATGTTGCACTCATTGTTTCAACTATATTTGCCTTTTTCTTTTGACGTTTGAATTTGGATAATTTGGAAGATTTGGGCTGTTTTTGTTTTGGTTTATTCTCTGGGGTTTCCTTGTTTTGACCTAATTTACTTGGGAGTTTATGTTCTGATGAGTGCAAATGTTAAACTCTATTTATAAACCTTAGTCGATCTCTACTTTTATAATATCCTGCTTTAGTTATCTTCAAGTAAGCTTCTTTTATTGTGAGATTATTTTGGGGTTGTGATGAACTGTTTCAGTTAATATTCGTTATAATCAGATCTTATTTCGCAA

Coding sequence (CDS)

ATGTTGGTTTACCAAGACCTTCTCACTGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGACGGTGAGGATGAAGGGGTTGATGACCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGAGCAACCTACCATGGACAAGAAGCAATTCATTGCATACATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTCTTCGTGGGAGAGAGCATGCATGATGATTCCTGCATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCCCCAGCTTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Homology
[Close]
BLAST of Cp4.1LG08g04970 vs. Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.0e-92
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLPKLKDF+FFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-80
Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE++NGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE QEAFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL KLKDFQFFVGE MHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.6e-79
Identity = 144/168 (85.71%), Postives = 153/168 (91.07%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ NG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL+ EKQE+FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL KL D QFFVGESMHDD  +VFAYYR GATDPTFLY A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.6e-78
Identity = 141/168 (83.93%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDL++GDELLSDSFPYKE+ENGMIWEVEGKWVV+GAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP+MDKK F++ IKK+IK LTP L+GE+QEAFK  IEGA K+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKY 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLPK+KD QFFVGESM DDS +VFAYY+EGATDPTFLY+AP LKEVKC
Sbjct: 121 LLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.6e-77
Identity = 137/168 (81.55%), Postives = 152/168 (90.48%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ NGM+WEVEGKWV+QGAV+VDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ ++K++IK LTPKL+ EKQE FKK+IEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL KL D QFFVGESMHDD C+VFAYY++GATDPTFLY A  LKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. TrEMBL
Match: Q3HVK2_SOLTU (P23 tumor protein-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.0e-78
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE Q+AFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQDAFKKNIESATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLPKLKDFQFFVGESM DDS +VFA+Y++G+ DPTFLYLAP LKE+KC
Sbjct: 121 LLPKLKDFQFFVGESMSDDSALVFAFYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. TrEMBL
Match: A0A067FWK0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030941mg PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.0e-78
Identity = 145/168 (86.31%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL KL D QFFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. TrEMBL
Match: A0A0V0HHH4_SOLCH (Putative P23 tumor protein-like OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-78
Identity = 144/168 (85.71%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ +IK++IK LTPKLEGE Q+AFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFIKRYIKNLTPKLEGEAQDAFKKNIESATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLPKLKDFQFFVGESM DDS +VFAYY+ G+ DPTFLYLAP LKE+KC
Sbjct: 121 LLPKLKDFQFFVGESMSDDSALVFAYYKAGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. TrEMBL
Match: K4B112_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-78
Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ Y+K++IK LTPKLEGE QEAFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKNLTPKLEGETQEAFKKNIESATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL K+KD QFFVGESMHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 121 LLQKIKDLQFFVGESMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. TrEMBL
Match: D7U9U6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02270 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.9e-78
Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENGM+WEVEGKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           +DQAVKVVDIVDTFRLQEQP+ DKKQF+ ++K++IKLLTPKLE EKQE FKK+IEGATKF
Sbjct: 61  EDQAVKVVDIVDTFRLQEQPSFDKKQFVTFMKRYIKLLTPKLEPEKQELFKKHIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLPKL D QFFVGESMHDD  +VFAYY+EGATDPTFLY A  LKE+KC
Sbjct: 121 LLPKLSDLQFFVGESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. TAIR10
Match: AT3G16640.1 (AT3G16640.1 translationally controlled tumor protein)

HSP 1 Score: 280.0 bits (715), Expect = 9.4e-76
Identity = 137/168 (81.55%), Postives = 147/168 (87.50%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWV  GAVDV+IGANPSAE  GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DD   KVVDIVDTFRLQEQPT DKK FIAYIKK+IKLLTPKL  E Q  FKK IEGATKF
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLP+L DFQFFVGE MHDDS +VFAYY+EG+T+PTFLY A  LKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. TAIR10
Match: AT3G05540.1 (AT3G05540.1 Methionine sulfoxide reductase (MSS4-like) family protein)

HSP 1 Score: 270.4 bits (690), Expect = 7.5e-73
Identity = 131/169 (77.51%), Postives = 151/169 (89.35%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQD+LTGDELLSDSFPYKE+ENGM+WEVEGKWVV+GA+D DIGANP  EG GEDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEG-GEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDI+DTFRLQEQP+ DKKQF+ ++K++IK L+PKL+ E QE FKK+IE ATKF
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLPKLKDFQFFVGESMH-DDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           L+ KLKDFQFFVGESM  ++  +VFAYYREGATDPTFLYLA  LKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. NCBI nr
Match: gi|115502853|sp|Q2PS27.1|TCTP_CUCMA (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 4.9e-90
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLPKLKDF+FFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. NCBI nr
Match: gi|641852829|gb|KDO71688.1| (hypothetical protein CISIN_1g030941mg [Citrus sinensis])

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 145/168 (86.31%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL KL D QFFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. NCBI nr
Match: gi|76160974|gb|ABA40450.1| (P23 tumor protein-like protein [Solanum tuberosum])

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE Q+AFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQDAFKKNIESATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LLPKLKDFQFFVGESM DDS +VFA+Y++G+ DPTFLYLAP LKE+KC
Sbjct: 121 LLPKLKDFQFFVGESMSDDSALVFAFYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. NCBI nr
Match: gi|568215190|ref|NP_001275182.1| (translationally-controlled tumor protein homolog [Solanum tuberosum])

HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78
Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKE++NGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE QEAFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL KLKDFQFFVGE MHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG08g04970 vs. NCBI nr
Match: gi|460368783|ref|XP_004230244.1| (PREDICTED: translationally-controlled tumor protein homolog [Solanum lycopersicum])

HSP 1 Score: 299.7 bits (766), Expect = 3.3e-78
Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60
           MLVYQDLLTGDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKKQF+ Y+K++IK LTPKLEGE QEAFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKNLTPKLEGETQEAFKKNIESATKF 120

Query: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 169
           LL K+KD QFFVGESMHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 121 LLQKIKDLQFFVGESMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g04970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCTP_CUCMA3.0e-9299.40Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=... [more]
TCTP_SOLTU1.2e-8085.12Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE... [more]
TCTP_HEVBR6.6e-7985.71Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP P... [more]
TCTP_CUCME5.6e-7883.93Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV... [more]
TCTP_ELAGV3.6e-7781.55Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tener... [more]
BLAST of Cp4.1LG08g04970 vs. TrEMBL
Match NameE-valueIdentityDescription
Q3HVK2_SOLTU1.0e-7885.71P23 tumor protein-like protein OS=Solanum tuberosum PE=2 SV=1[more]
A0A067FWK0_CITSI1.0e-7886.31Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030941mg PE=3 SV=1[more]
A0A0V0HHH4_SOLCH2.3e-7885.71Putative P23 tumor protein-like OS=Solanum chacoense PE=3 SV=1[more]
K4B112_SOLLC2.3e-7885.12Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1[more]
D7U9U6_VITVI3.9e-7885.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02270 PE=3 SV=... [more]
BLAST of Cp4.1LG08g04970 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16640.19.4e-7681.55 translationally controlled tumor protein[more]
AT3G05540.17.5e-7377.51 Methionine sulfoxide reductase (MSS4-like) family protein[more]
BLAST of Cp4.1LG08g04970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|115502853|sp|Q2PS27.1|TCTP_CUCMA4.9e-9099.40RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN... [more]
gi|641852829|gb|KDO71688.1|1.5e-7886.31hypothetical protein CISIN_1g030941mg [Citrus sinensis][more]
gi|76160974|gb|ABA40450.1|1.5e-7885.71P23 tumor protein-like protein [Solanum tuberosum][more]
gi|568215190|ref|NP_001275182.1|1.9e-7885.12translationally-controlled tumor protein homolog [Solanum tuberosum][more]
gi|460368783|ref|XP_004230244.1|3.3e-7885.12PREDICTED: translationally-controlled tumor protein homolog [Solanum lycopersicu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018105Translational_control_tumour_p
IPR018103Translation_control_tumour_CS
IPR011323Mss4/transl-control_tumour
IPR011057Mss4-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0031117 positive regulation of microtubule depolymerization
biological_process GO:0030154 cell differentiation
biological_process GO:0009735 response to cytokinin
biological_process GO:0090333 regulation of stomatal closure
biological_process GO:0040014 regulation of multicellular organism growth
biological_process GO:0007346 regulation of mitotic cell cycle
biological_process GO:0001558 regulation of cell growth
biological_process GO:0048768 root hair cell tip growth
biological_process GO:0009860 pollen tube growth
biological_process GO:0048527 lateral root development
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009819 drought recovery
biological_process GO:0008283 cell proliferation
biological_process GO:0010252 auxin homeostasis
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0045298 tubulin complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0090406 pollen tube
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0048046 apoplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g04970.1Cp4.1LG08g04970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 1..168
score: 1.6
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3DG3DSA:2.170.150.10coord: 1..168
score: 7.3
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 125..147
scor
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 46..57
score: 5.1E-26coord: 60..79
score: 5.1E-26coord: 1..21
score: 5.1
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 1..168
score: 1.6
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 1..164
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g04970Cucsa.253020Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g04970CmaCh00G004010Cucurbita maxima (Rimu)cmacpeB011
Cp4.1LG08g04970CmaCh14G016170Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g04970CmaCh06G015040Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g04970CmoCh06G015020Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g04970CmoCh14G016540Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g04970Cla021747Watermelon (97103) v1cpewmB845
Cp4.1LG08g04970Csa3G154390Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g04970MELO3C006670Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g04970ClCG05G006160Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g04970CSPI03G14490Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g04970Lsi05G015450Bottle gourd (USVL1VR-Ls)cpelsiB718
Cp4.1LG08g04970MELO3C006670.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g04970CsaV3_3G014730Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g04970Bhi01G000726Wax gourdcpewgoB1110
Cp4.1LG08g04970CsGy3G014630Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g04970Carg20104Silver-seed gourdcarcpeB1165
Cp4.1LG08g04970Carg17338Silver-seed gourdcarcpeB0861
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g04970Cp4.1LG03g11490Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g04970Wax gourdcpewgoB1095
Cp4.1LG08g04970Cucurbita pepo (Zucchini)cpecpeB193
Cp4.1LG08g04970Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g04970Cucurbita pepo (Zucchini)cpecpeB343
Cp4.1LG08g04970Cucurbita maxima (Rimu)cmacpeB410
Cp4.1LG08g04970Cucurbita maxima (Rimu)cmacpeB412
Cp4.1LG08g04970Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g04970Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g04970Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g04970Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g04970Bottle gourd (USVL1VR-Ls)cpelsiB705
Cp4.1LG08g04970Watermelon (Charleston Gray)cpewcgB763
Cp4.1LG08g04970Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g04970Watermelon (97103) v1cpewmB853
Cp4.1LG08g04970Melon (DHL92) v3.5.1cpemeB793
Cp4.1LG08g04970Melon (DHL92) v3.6.1cpemedB933
Cp4.1LG08g04970Silver-seed gourdcarcpeB0109
Cp4.1LG08g04970Silver-seed gourdcarcpeB0165
Cp4.1LG08g04970Silver-seed gourdcarcpeB0987