Cp4.1LG03g11490 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g11490
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranslationally-controlled tumor protein homolog
LocationCp4.1LG03 : 10997206 .. 10998910 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTTCTTGGTTTTTGAAGGACTGCCCTATAAATTGATTAAACCCTCTTCATCTCTTGATTGCCGTACTCCCTCGCCTCATAAATTTTCAAGAGGGATCCGGGAATCTACTCTGCAACCATGTTGGTTTACACCGATCTTCTCTCCGGTAATGATATTATGAGTTTTCGATTATTTATGTTTTTGTTTAGTATGTGTATTTTTGTATAGGATATGGATTTTGAGCTGTTAGGGTTTTCTGTTGTTATTTTGGATTTGTGATTTATATGGATTGTTTGAATATCGTTTGGATCTGGTACATAATTTAGAGTAATTGATTTTGGTTTAACTGATACCAATTTGATTCATACCATAAAAGATTTTACAAATATGCGTAATAGCCTTTTGATTAGCTGTTGGGGAGAGAGCTCTCTGCGGATTGAAGTAGTATATTTCTCATAATCGATTGTGTTCTAGAGTATTTGATGTTATTGGTGTAAAATTTTTGGACTCTCTTCTTTCCATTTATGTGAAGGATTTGTTTAAATTCCTTTTGATTAGCTGTTGGAGAGAGCTCTCTGCGGATTGAAGACGTATATTTTTCATAATCGATTGTGTTCTAGAGTATTTGATGTTTTTGGCATAAAATTTTTGGACTCTGTTCTTTTAATTTGTGTGAAGGATTTGTTTAAATTTTATATCAGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGGTTAGCTATTTTCGTTTAATGTAATTTTTTTTCACTAAGAACAATTTTTTTTTGTGTTAATGGTACCAAGTTTTTAGTTTCTTACACAATTTATTGCAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATCGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTCGTCGACATTGTCGATACCTTCAGGCTTCAGGTAGGCATGCCTCCTCCTTGGACAAGCAGAAGGTTCAAGGATTATGCAAACATTCAAGCAGAATTTATTTATTTATTTCAATTTGGGTTTCCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTACTTGCAAAGCTCAAGGACTTGCAATTGTAAGTATTTCAGTAGTTGTCTATGTGTTCTTGGTTTATTCCAACCAAATCTTCTAACCTGTTGTGGTCGATTTGGTTCAAGTTTTTGTATCACTAGAACGATACCTAACATACGATATGTTGTTTTGCAGCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAAGAACAAAAGTTCATAGCAGAATGCTTCATATAGCATTGTTAGTTTCTACTATTTTTGCCTGTTCTCATGACATTTGAATTTGAATGGTTTGGGCTGTTTTCTTTTTTGTTTTGGTTTAGTTTGGGTTTCTTTGTTTTGACTGAGAGCTTTTGTCCTGGTGAATGCGAAAGTTTACTCTATTTATATGCCCAAGAATCTCTACTTTTATCGTATCA

mRNA sequence

AAAATTTCTTGGTTTTTGAAGGACTGCCCTATAAATTGATTAAACCCTCTTCATCTCTTGATTGCCGTACTCCCTCGCCTCATAAATTTTCAAGAGGGATCCGGGAATCTACTCTGCAACCATGTTGGTTTACACCGATCTTCTCTCCGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATCGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTCGTCGACATTGTCGATACCTTCAGGCTTCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTACTTGCAAAGCTCAAGGACTTGCAATTCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAAGAACAAAAGTTCATAGCAGAATGCTTCATATAGCATTGTTAGTTTCTACTATTTTTGCCTGTTCTCATGACATTTGAATTTGAATGGTTTGGGCTGTTTTCTTTTTTGTTTTGGTTTAGTTTGGGTTTCTTTGTTTTGACTGAGAGCTTTTGTCCTGGTGAATGCGAAAGTTTACTCTATTTATATGCCCAAGAATCTCTACTTTTATCGTATCA

Coding sequence (CDS)

ATGTTGGTTTACACCGATCTTCTCTCCGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATCGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTCGTCGACATTGTCGATACCTTCAGGCTTCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTACTTGCAAAGCTCAAGGACTTGCAATTCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGVDDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKYLLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC
Homology
[Close]
BLAST of Cp4.1LG03g11490 vs. Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.5e-83
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-79
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DL+SGDELLSDSFPYKEIENGMIWEV+GKWVV+GAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK+F++ IKKYIK +TP L+GE+QEAFK  IEGA KY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL K+KDLQFFVGESM DDS+MVFAYYKEGATDPTFLY+APGLKEVKC
Sbjct: 121 LLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-79
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEI+NGM+WEV GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+ YIK+YIK +TPKLEGE QEAFKKNIE ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KLKD QFFVGE MHDDS++VFAYYK+G+ DPTFLYLAPGLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.6e-78
Identity = 138/168 (82.14%), Postives = 154/168 (91.67%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPY+EIENG++WEVDGKWVVQGA+DVDIGANPSAEG G+DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+ ++K+YIK ++ KL+ EKQE FKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDD  +VFAYYK+GATDPTFLY + GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-77
Identity = 141/168 (83.93%), Postives = 153/168 (91.07%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY D LSGDELLSDSFPY+E+ENG++WEVDG WVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK FIAYIK+YIK +T KLEGE+ +AFKKN+E ATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KLKDLQFFVGESMHDD S+VFAYY+EGA DPTFLY A GLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. TrEMBL
Match: W1P5L1_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00045p00225280 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 9.2e-80
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGM+WEVDGKWVVQGA+DVDIGANPSAEGA E EGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEMENGMLWEVDGKWVVQGAIDVDIGANPSAEGADEGEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK+F++YIKKYIKL+TPKL+ E+QE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKMFVSYIKKYIKLLTPKLDTEQQEIFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDDSS+VFAYYKEGATDPTFLY A GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. TrEMBL
Match: A0A068V9P5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00000655001 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-78
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLLSGDELLSDSFPYKEIENGM+WEV+GKWVVQGAV+V+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVEVNIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+AYIKKYIK ++PKLE EK +AFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVAYIKKYIKNLSPKLEPEKLDAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD S+VFAYYKEGATDPTFLYLAPGLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSIVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. TrEMBL
Match: M5XPD7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009639mg PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.9e-78
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ NG++WEVDGKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 116 MLVYQDLLTGDELLSDSFPYKEVHNGVLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 175

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQ VKVVDIVDTFRLQEQPP DKK F+ ++K+YIKL+TPKLEGEKQE FKKNIEGATK+
Sbjct: 176 DDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEKQEEFKKNIEGATKF 235

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD  +VFAYYKEGATDPTF+Y A GL+EVKC
Sbjct: 236 LLSKLSDLQFFVGESMHDDGGLVFAYYKEGATDPTFIYFAHGLREVKC 283

[Close]
BLAST of Cp4.1LG03g11490 vs. TrEMBL
Match: A0A068TRC3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025805001 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.9e-78
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG++WEV+GKWVVQGAV+VDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVEVDIGANPSAEGCGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AYIKKYIKL+TPK++ EKQE FKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKLLTPKIDAEKQEHFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESM DDS++VFAYYK+GATDPTFLY   GLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMADDSTLVFAYYKDGATDPTFLYFGVGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. TrEMBL
Match: A8VRK8_SALMI (Translationally controlled tumor protein OS=Salvia miltiorrhiza GN=TCTP PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.1e-78
Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG +WEV+GKWVV G+VDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGALWEVEGKWVVTGSVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK FI YIKKYIK +TPKL+ EKQ+ FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFIGYIKKYIKTLTPKLDAEKQDEFKKSIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           L++K+KDLQFFVGESMHDDSS+VFAYYKEGATDPTFLY A GLKE+KC
Sbjct: 121 LVSKIKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAHGLKEIKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. TAIR10
Match: AT3G16640.1 (AT3G16640.1 translationally controlled tumor protein)

HSP 1 Score: 271.6 bits (693), Expect = 3.4e-73
Identity = 133/168 (79.17%), Postives = 145/168 (86.31%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG++WEV+GKWV  GAVDV+IGANPSAE  GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DD   KVVDIVDTFRLQEQP  DKK FIAYIKKYIKL+TPKL  E Q  FKK IEGATK+
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL +L D QFFVGE MHDDS++VFAYYKEG+T+PTFLY A GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. TAIR10
Match: AT3G05540.1 (AT3G05540.1 Methionine sulfoxide reductase (MSS4-like) family protein)

HSP 1 Score: 263.5 bits (672), Expect = 9.1e-71
Identity = 127/169 (75.15%), Postives = 150/169 (88.76%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY D+L+GDELLSDSFPYKEIENGM+WEV+GKWVV+GA+D DIGANP  EG GEDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEG-GEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDI+DTFRLQEQP  DKK F+ ++K+YIK ++PKL+ E QE FKK+IE ATK+
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLAKLKDLQFFVGESMH-DDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           L++KLKD QFFVGESM  ++ S+VFAYY+EGATDPTFLYLA GLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. NCBI nr
Match: gi|115502853|sp|Q2PS27.1|TCTP_CUCMA (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-80
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. NCBI nr
Match: gi|586680345|ref|XP_006840565.1| (PREDICTED: translationally-controlled tumor protein homolog [Amborella trichopoda])

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGM+WEVDGKWVVQGA+DVDIGANPSAEGA E EGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEMENGMLWEVDGKWVVQGAIDVDIGANPSAEGADEGEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK+F++YIKKYIKL+TPKL+ E+QE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKMFVSYIKKYIKLLTPKLDTEQQEIFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDDSS+VFAYYKEGATDPTFLY A GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. NCBI nr
Match: gi|661879064|emb|CDP17189.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 299.7 bits (766), Expect = 3.3e-78
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLLSGDELLSDSFPYKEIENGM+WEV+GKWVVQGAV+V+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVEVNIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+AYIKKYIK ++PKLE EK +AFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVAYIKKYIKNLSPKLEPEKLDAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD S+VFAYYKEGATDPTFLYLAPGLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSIVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. NCBI nr
Match: gi|645233137|ref|XP_008223198.1| (PREDICTED: translationally-controlled tumor protein homolog [Prunus mume])

HSP 1 Score: 298.9 bits (764), Expect = 5.6e-78
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ NG++WEVDGKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEVHNGVLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQ VKVVDIVDTFRLQEQPP DKK F+ ++K+YIKL+TPKLEGEKQE FKKNIEGATK+
Sbjct: 61  DDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEKQEEFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD  +VFAYYKEGATDPTF+Y A GL+EVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGGLVFAYYKEGATDPTFIYFAHGLREVKC 168

[Close]
BLAST of Cp4.1LG03g11490 vs. NCBI nr
Match: gi|596132268|ref|XP_007222184.1| (hypothetical protein PRUPE_ppa009639mg [Prunus persica])

HSP 1 Score: 298.9 bits (764), Expect = 5.6e-78
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ NG++WEVDGKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 116 MLVYQDLLTGDELLSDSFPYKEVHNGVLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 175

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQ VKVVDIVDTFRLQEQPP DKK F+ ++K+YIKL+TPKLEGEKQE FKKNIEGATK+
Sbjct: 176 DDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEKQEEFKKNIEGATKF 235

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD  +VFAYYKEGATDPTF+Y A GL+EVKC
Sbjct: 236 LLSKLSDLQFFVGESMHDDGGLVFAYYKEGATDPTFIYFAHGLREVKC 283

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g11490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCTP_CUCMA7.5e-8389.29Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=... [more]
TCTP_CUCME2.9e-7985.71Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV... [more]
TCTP_SOLTU2.9e-7983.93Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE... [more]
TCTP_ORYSJ5.6e-7882.14Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica... [more]
TCTP_HORVU1.6e-7783.93Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2... [more]
BLAST of Cp4.1LG03g11490 vs. TrEMBL
Match NameE-valueIdentityDescription
W1P5L1_AMBTC9.2e-8087.50Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00045p00225280 PE=3 SV=... [more]
A0A068V9P5_COFCA2.3e-7887.50Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00000655001 PE=3 SV=1[more]
M5XPD7_PRUPE3.9e-7883.93Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009639mg PE=3 SV=1[more]
A0A068TRC3_COFCA3.9e-7885.71Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025805001 PE=3 SV=1[more]
A8VRK8_SALMI5.1e-7885.12Translationally controlled tumor protein OS=Salvia miltiorrhiza GN=TCTP PE=2 SV=... [more]
BLAST of Cp4.1LG03g11490 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16640.13.4e-7379.17 translationally controlled tumor protein[more]
AT3G05540.19.1e-7175.15 Methionine sulfoxide reductase (MSS4-like) family protein[more]
BLAST of Cp4.1LG03g11490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|115502853|sp|Q2PS27.1|TCTP_CUCMA1.2e-8089.29RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN... [more]
gi|586680345|ref|XP_006840565.1|1.3e-7987.50PREDICTED: translationally-controlled tumor protein homolog [Amborella trichopod... [more]
gi|661879064|emb|CDP17189.1|3.3e-7887.50unnamed protein product [Coffea canephora][more]
gi|645233137|ref|XP_008223198.1|5.6e-7883.93PREDICTED: translationally-controlled tumor protein homolog [Prunus mume][more]
gi|596132268|ref|XP_007222184.1|5.6e-7883.93hypothetical protein PRUPE_ppa009639mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018105Translational_control_tumour_p
IPR018103Translation_control_tumour_CS
IPR011323Mss4/transl-control_tumour
IPR011057Mss4-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010252 auxin homeostasis
biological_process GO:0090333 regulation of stomatal closure
biological_process GO:0008150 biological_process
biological_process GO:0008283 cell proliferation
biological_process GO:0030154 cell differentiation
biological_process GO:0048768 root hair cell tip growth
biological_process GO:0009735 response to cytokinin
biological_process GO:0040014 regulation of multicellular organism growth
biological_process GO:0007346 regulation of mitotic cell cycle
biological_process GO:0001558 regulation of cell growth
biological_process GO:0031117 positive regulation of microtubule depolymerization
biological_process GO:0009860 pollen tube growth
biological_process GO:0048527 lateral root development
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009819 drought recovery
cellular_component GO:0009579 thylakoid
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005829 cytosol
cellular_component GO:0090406 pollen tube
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009507 chloroplast
cellular_component GO:0048046 apoplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g11490.1Cp4.1LG03g11490.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 1..168
score: 1.33
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3DG3DSA:2.170.150.10coord: 1..168
score: 1.7
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01002TCTP_1coord: 45..55
scor
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 125..147
scor
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 1..21
score: 1.5E-25coord: 46..57
score: 1.5E-25coord: 60..79
score: 1.5
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 1..168
score: 4.9
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 1..164
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g11490Cucsa.253020Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g11490CmaCh00G004010Cucurbita maxima (Rimu)cmacpeB003
Cp4.1LG03g11490CmaCh14G016170Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g11490CmaCh06G015040Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g11490CmoCh06G015020Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g11490CmoCh14G016540Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g11490Cla021747Watermelon (97103) v1cpewmB613
Cp4.1LG03g11490Csa3G154390Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g11490MELO3C006670Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g11490ClCG05G006160Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g11490CSPI03G14490Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g11490Lsi05G015450Bottle gourd (USVL1VR-Ls)cpelsiB512
Cp4.1LG03g11490MELO3C006670.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g11490CsaV3_3G014730Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g11490Bhi01G000726Wax gourdcpewgoB0783
Cp4.1LG03g11490CsGy3G014630Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g11490Carg20104Silver-seed gourdcarcpeB1164
Cp4.1LG03g11490Carg17338Silver-seed gourdcarcpeB0860
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g11490Cp4.1LG08g04970Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g11490Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g11490Cucurbita pepo (Zucchini)cpecpeB337
Cp4.1LG03g11490Cucurbita maxima (Rimu)cmacpeB006
Cp4.1LG03g11490Cucurbita maxima (Rimu)cmacpeB403
Cp4.1LG03g11490Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g11490Cucurbita moschata (Rifu)cmocpeB365
Cp4.1LG03g11490Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g11490Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g11490Watermelon (Charleston Gray)cpewcgB562
Cp4.1LG03g11490Watermelon (97103) v1cpewmB623
Cp4.1LG03g11490Melon (DHL92) v3.5.1cpemeB555
Cp4.1LG03g11490Melon (DHL92) v3.6.1cpemedB659
Cp4.1LG03g11490Silver-seed gourdcarcpeB0106
Cp4.1LG03g11490Silver-seed gourdcarcpeB0986
Cp4.1LG03g11490Wax gourdcpewgoB0762