CmaCh06G015040 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G015040
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTranslationally-controlled tumor
LocationCma_Chr06 : 9549000 .. 9551026 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTTTGTTTTGGTTATATAATTATTTTTTATTCATGTCAGGGAGGTTTTCCATTTATGTTATGGTGGTTTGTTTAGGTCATAGGGCTTCGATTTTCCATTGTCGCAGCTTTTTATGTCTCTGATTTCTATGGATTCTTTGGTTAACTTTCAGATCTGGAACATATTTGTGATTTCTATCGATTTTGCTTTAGCTCGTAGTGATCTGATTTATGAGATAGGGTAACAAAATATGCGGTATCTTTTGGTTAGCTTTTGTGGGAGAGCGATTGTGGCTCTCTTGTATCAGCTTTCGAATTTGAATGAATATTTACAGTACTTTGAATCAGTATGTTATGATTTTGGTTTATTGTTGAAGAGTTTTGTTTTTGGGTCGTAGAATCTGAGATTAGAGTTGAGAGCTTCGGCTGTCTGCTTTAGATGATTTGATGCTATTGTTAGTAATATTTTTTCTAGTTTGGTGTACATGGATTCGTTCCCTTCATTGGTGACAAAGCAATTGTTTTTAATTTTGATTTCAGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGGTCAGTAGATTTTGTTTATTGTATGCTTTTTCACTTTTTCATGGAAAGAAAATGTCGTGTCTTAATGCTACCGAGTATATAATTACTGAAACTAAGTGTTAGCCAAATTGAATGAGTATTCAGCACAATACTTTAGTACTTGAATCATTATGCTGCAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGATGGTGAGGATGAAGGGGTTGATGATCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGTAGGCATACCTTCCGGTTAAGACATTCAAGGATTATTGCAAGTTTTTAATTTAAGGGCATACTTGGGAGTGATTTTAAATCTTTCCCAAACTTGACCTAAATCTATTTTTCTTTCCACTTTGGGATTCCAGGAGCAACCTACCATGGACAAGAAGCAATTCATTGCATATATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTGTAAGTACTTCCCTTTGTTTAGGCTATCTTTTATTGGCATTACATCTTTAGAAATAGAAATATTTGAACTCACTCAACATAGCAAACCAAATCTTACAATTTGTGATCAGTTTGGTTCTTTGTATTTTAACATTGCTCTCGAACACCCTTTTTTGAATCGATATGTGATATGAAACTTGACTTTTGGTGTTCGAGCTTTTAGTGCTTCTCCTAAAAGCAGCACTTACAGAACCAAGTGTTTTTAGAATTTACAATGTTCTCAAAGTTTTAAGTTTTCTTATCATTAGAATGATTCCTAATTGTATTATATGTTCTTTTGCAGCTTCGTGGGAGAGAGCATGCATGACGATTCCTGTATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCGCCAGCTTTGAAGGAAGTCAAGTGCTGAGAGAACAGAACAAAAGATTTAAGCAGAATGATTCATGTTGCACTCTTTGTTTCAACTATATTTGCCTTTTTCTCTTGACGTTTGAATTTGGATAATTTGGAAGATTTGGGCTGTTTTTGTTTTAGTTTGTTCTCTGGGGTTTCCTTGTTTTGACCTAATTTACTGGGAGTGTATGTTCTGGTGAGTGCAAACGTTAGACTCTATTTATAAACCTTAGTCAATCTCTAGTTTTATAATATTCTGCTTTAGTTATCTTCAAGTAAGCCTCTTTTATTGTGAGATTATTTTGGGGTTGTGATGTTTTAGTTAATATGATGTTTTAGTTAATATTTGTTCTAATCAGATCTTAATTCGCAAGTTTCAAATGTAAAAAGTGATTGGGGCCATAATAATTGATAGATACTTTTTGTCA

mRNA sequence

ATGGAGATCTGGAACATATTTGTGATTTCTATCGATTTTGCTTTAGCTCGTAGTGATCTGATTTATGAGATAGGTTTGGTGTACATGGATTCGTTCCCTTCATTGGTGACAAAGCAATTGTTTTTAATTTTGATTTCAGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGATGGTGAGGATGAAGGGGTTGATGATCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGAGCAACCTACCATGGACAAGAAGCAATTCATTGCATATATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTCTTCGTGGGAGAGAGCATGCATGACGATTCCTGTATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCGCCAGCTTTGAAGGAAGTCAAGTGCTGAGAGAACAGAACAAAAGATTTAAGCAGAATGATTCATGTTGCACTCTTTGTTTCAACTATATTTGCCTTTTTCTCTTGACGTTTGAATTTGGATAATTTGGAAGATTTGGGCTGTTTTTGTTTTAGTTTGTTCTCTGGGGTTTCCTTGTTTTGACCTAATTTACTGGGAGTGTATGTTCTGGTGAGTGCAAACGTTAGACTCTATTTATAAACCTTAGTCAATCTCTAGTTTTATAATATTCTGCTTTAGTTATCTTCAAGTAAGCCTCTTTTATTGTGAGATTATTTTGGGGTTGTGATGTTTTAGTTAATATGATGTTTTAGTTAATATTTGTTCTAATCAGATCTTAATTCGCAAGTTTCAAATGTAAAAAGTGATTGGGGCCATAATAATTGATAGATACTTTTTGTCA

Coding sequence (CDS)

ATGGAGATCTGGAACATATTTGTGATTTCTATCGATTTTGCTTTAGCTCGTAGTGATCTGATTTATGAGATAGGTTTGGTGTACATGGATTCGTTCCCTTCATTGGTGACAAAGCAATTGTTTTTAATTTTGATTTCAGGTGACGAGCTTCTCTCGGATTCGTTCCCATACAAGGAACTCGAGAATGGAATGATCTGGGAAGTTGAGGGAAAGTGGGTCGTTCAAGGAGCGGTCGATGTGGACATTGGTGCAAATCCTTCTGCTGAAGGTGATGGTGAGGATGAAGGGGTTGATGATCAAGCTGTGAAGGTGGTTGACATTGTCGACACCTTCAGGCTTCAGGAGCAACCTACCATGGACAAGAAGCAATTCATTGCATATATTAAGAAGTTTATCAAATTGCTGACACCTAAGCTGGAAGGAGAGAAACAGGAGGCATTTAAGAAGAACATTGAAGGAGCAACTAAGTTTCTGCTTCCAAAGCTCAAGGACTTCCAGTTCTTCGTGGGAGAGAGCATGCATGACGATTCCTGTATCGTGTTTGCATACTACAGGGAAGGAGCCACTGACCCAACATTTTTATACCTTGCGCCAGCTTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MEIWNIFVISIDFALARSDLIYEIGLVYMDSFPSLVTKQLFLILISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Homology
[Close]
BLAST of CmaCh06G015040 vs. Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 7.2e-88
Identity = 159/162 (98.15%), Postives = 162/162 (100.00%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DF+FFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 286.2 bits (731), Expect = 2.9e-76
Identity = 135/162 (83.33%), Postives = 150/162 (92.59%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKE++NGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE QEAFKKNIE ATKFLL KLK
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DFQFFVGE MHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 127 DFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of CmaCh06G015040 vs. Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 7.0e-75
Identity = 136/162 (83.95%), Postives = 150/162 (92.59%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L+SGDELLSDSFPYKE+ENGMIWEVEGKWVV+GAVDVDIGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP+MDKK F++ IKK+IK LTP L+GE+QEAFK  IEGA K+LLPK+K
Sbjct: 67  VVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           D QFFVGESM DDS +VFAYY+EGATDPTFLY+AP LKEVKC
Sbjct: 127 DLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-74
Identity = 136/162 (83.95%), Postives = 147/162 (90.74%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKE+ NG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL+ EKQE+FKKNIEGATKFLL KL 
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLS 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           D QFFVGESMHDD  +VFAYYR GATDPTFLY A ALKEVKC
Sbjct: 127 DLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 3.9e-73
Identity = 133/161 (82.61%), Postives = 145/161 (90.06%), Query Frame = 1 

Query: 45  ISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKV 104
           +SGDELLSDSFPY+ELENG++WEV+G WVVQGAVDVDIGANPSAEG GEDEGVDDQAVKV
Sbjct: 8   LSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKV 67

Query: 105 VDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKD 164
           VDIVDTFRLQEQP  DKKQFIAYIK++IK LT KLEGE+ +AFKKN+E ATK+LL KLKD
Sbjct: 68  VDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKD 127

Query: 165 FQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
            QFFVGESMHDD  +VFAYYREGA DPTFLY A  LKEVKC
Sbjct: 128 LQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. TrEMBL
Match: A0A0B0P7K2_GOSAR (Translationally-controlled tumor OS=Gossypium arboreum GN=F383_02604 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.4e-75
Identity = 140/162 (86.42%), Postives = 149/162 (91.98%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           LISGDELLSDSFPYKE+ENGM+WEVEGKWVVQGAVDVDIGANPSAEG  EDEGVDDQAVK
Sbjct: 7   LISGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ +IKKFIK LTPKL+ EKQE+FKKNIEGATKFLL KLK
Sbjct: 67  VVDIVDTFRLQEQPPFDKKQFVVFIKKFIKNLTPKLDAEKQESFKKNIEGATKFLLSKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           D QFFVGESMHDD C+VFAYY++GA DPTFLY A ALKEVKC
Sbjct: 127 DLQFFVGESMHDDGCLVFAYYKDGAVDPTFLYFAYALKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. TrEMBL
Match: Q3HVK2_SOLTU (P23 tumor protein-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.4e-74
Identity = 136/162 (83.95%), Postives = 151/162 (93.21%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE Q+AFKKNIE ATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQDAFKKNIESATKFLLPKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DFQFFVGESM DDS +VFA+Y++G+ DPTFLYLAP LKE+KC
Sbjct: 127 DFQFFVGESMSDDSALVFAFYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of CmaCh06G015040 vs. TrEMBL
Match: A0A067FWK0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030941mg PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.4e-74
Identity = 137/162 (84.57%), Postives = 149/162 (91.98%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL 
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLS 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           D QFFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct: 127 DLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. TrEMBL
Match: M1CAU2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024716 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.2e-74
Identity = 137/167 (82.04%), Postives = 152/167 (91.02%), Query Frame = 1 

Query: 39  QLFLILISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVD 98
           +LF   I+GDELLSDSFPYKE++NGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGVD
Sbjct: 14  KLFKKNIAGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVD 73

Query: 99  DQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFL 158
           DQAVKVVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE QEAFKKNIE ATKFL
Sbjct: 74  DQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFL 133

Query: 159 LPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           L KLKDFQFFVGE MHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 134 LSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 180

[Close]
BLAST of CmaCh06G015040 vs. TrEMBL
Match: K4B112_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 5.4e-74
Identity = 135/162 (83.33%), Postives = 150/162 (92.59%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ Y+K++IK LTPKLEGE QEAFKKNIE ATKFLL K+K
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYMKRYIKNLTPKLEGETQEAFKKNIESATKFLLQKIK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           D QFFVGESMHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 127 DLQFFVGESMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of CmaCh06G015040 vs. TAIR10
Match: AT3G16640.1 (AT3G16640.1 translationally controlled tumor protein)

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-71
Identity = 129/162 (79.63%), Postives = 141/162 (87.04%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKE+ENG++WEVEGKWV  GAVDV+IGANPSAE  GEDEGVDD   K
Sbjct: 7   LLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQPT DKK FIAYIKK+IKLLTPKL  E Q  FKK IEGATKFLLP+L 
Sbjct: 67  VVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLS 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DFQFFVGE MHDDS +VFAYY+EG+T+PTFLY A  LKEVKC
Sbjct: 127 DFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. TAIR10
Match: AT3G05540.1 (AT3G05540.1 Methionine sulfoxide reductase (MSS4-like) family protein)

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-68
Identity = 123/163 (75.46%), Postives = 145/163 (88.96%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           +++GDELLSDSFPYKE+ENGM+WEVEGKWVV+GA+D DIGANP  EG GEDEGVDDQAVK
Sbjct: 7   ILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEG-GEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDI+DTFRLQEQP+ DKKQF+ ++K++IK L+PKL+ E QE FKK+IE ATKFL+ KLK
Sbjct: 67  VVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKFLMSKLK 126

Query: 164 DFQFFVGESMH-DDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DFQFFVGESM  ++  +VFAYYREGATDPTFLYLA  LKE+KC
Sbjct: 127 DFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]
BLAST of CmaCh06G015040 vs. NCBI nr
Match: gi|115502853|sp|Q2PS27.1|TCTP_CUCMA (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP [Cucurbita maxima])

HSP 1 Score: 324.7 bits (831), Expect = 1.2e-85
Identity = 159/162 (98.15%), Postives = 162/162 (100.00%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DF+FFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC
Sbjct: 127 DFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. NCBI nr
Match: gi|728841419|gb|KHG20862.1| (Translationally-controlled tumor [Gossypium arboreum])

HSP 1 Score: 288.5 bits (737), Expect = 9.2e-75
Identity = 140/162 (86.42%), Postives = 149/162 (91.98%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           LISGDELLSDSFPYKE+ENGM+WEVEGKWVVQGAVDVDIGANPSAEG  EDEGVDDQAVK
Sbjct: 7   LISGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ +IKKFIK LTPKL+ EKQE+FKKNIEGATKFLL KLK
Sbjct: 67  VVDIVDTFRLQEQPPFDKKQFVVFIKKFIKNLTPKLDAEKQESFKKNIEGATKFLLSKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           D QFFVGESMHDD C+VFAYY++GA DPTFLY A ALKEVKC
Sbjct: 127 DLQFFVGESMHDDGCLVFAYYKDGAVDPTFLYFAYALKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. NCBI nr
Match: gi|641852829|gb|KDO71688.1| (hypothetical protein CISIN_1g030941mg [Citrus sinensis])

HSP 1 Score: 286.6 bits (732), Expect = 3.5e-74
Identity = 137/162 (84.57%), Postives = 149/162 (91.98%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPSAEG  EDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL 
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLS 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           D QFFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct: 127 DLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 168

[Close]
BLAST of CmaCh06G015040 vs. NCBI nr
Match: gi|76160974|gb|ABA40450.1| (P23 tumor protein-like protein [Solanum tuberosum])

HSP 1 Score: 286.6 bits (732), Expect = 3.5e-74
Identity = 136/162 (83.95%), Postives = 151/162 (93.21%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKELENGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE Q+AFKKNIE ATKFLLPKLK
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQDAFKKNIESATKFLLPKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DFQFFVGESM DDS +VFA+Y++G+ DPTFLYLAP LKE+KC
Sbjct: 127 DFQFFVGESMSDDSALVFAFYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of CmaCh06G015040 vs. NCBI nr
Match: gi|568215190|ref|NP_001275182.1| (translationally-controlled tumor protein homolog [Solanum tuberosum])

HSP 1 Score: 286.2 bits (731), Expect = 4.6e-74
Identity = 135/162 (83.33%), Postives = 150/162 (92.59%), Query Frame = 1 

Query: 44  LISGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVK 103
           L++GDELLSDSFPYKE++NGM+WEV+GKWVVQGAVDV+IGANPSAEG GEDEGVDDQAVK
Sbjct: 7   LLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVK 66

Query: 104 VVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLK 163
           VVDIVDTFRLQEQP  DKKQF+ YIK++IK LTPKLEGE QEAFKKNIE ATKFLL KLK
Sbjct: 67  VVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLK 126

Query: 164 DFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 206
           DFQFFVGE MHDDS +VFAYY++G+ DPTFLYLAP LKE+KC
Sbjct: 127 DFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

The following BLAST results are available for this feature:
BLAST of CmaCh06G015040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCTP_CUCMA7.2e-8898.15Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=... [more]
TCTP_SOLTU2.9e-7683.33Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE... [more]
TCTP_CUCME7.0e-7583.95Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV... [more]
TCTP_HEVBR1.6e-7483.95Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP P... [more]
TCTP_HORVU3.9e-7382.61Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2... [more]
BLAST of CmaCh06G015040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B0P7K2_GOSAR6.4e-7586.42Translationally-controlled tumor OS=Gossypium arboreum GN=F383_02604 PE=3 SV=1[more]
Q3HVK2_SOLTU2.4e-7483.95P23 tumor protein-like protein OS=Solanum tuberosum PE=2 SV=1[more]
A0A067FWK0_CITSI2.4e-7484.57Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030941mg PE=3 SV=1[more]
M1CAU2_SOLTU3.2e-7482.04Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024716 PE=3 SV=1[more]
K4B112_SOLLC5.4e-7483.33Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1[more]
BLAST of CmaCh06G015040 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16640.12.2e-7179.63 translationally controlled tumor protein[more]
AT3G05540.11.8e-6875.46 Methionine sulfoxide reductase (MSS4-like) family protein[more]
BLAST of CmaCh06G015040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|115502853|sp|Q2PS27.1|TCTP_CUCMA1.2e-8598.15RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN... [more]
gi|728841419|gb|KHG20862.1|9.2e-7586.42Translationally-controlled tumor [Gossypium arboreum][more]
gi|641852829|gb|KDO71688.1|3.5e-7484.57hypothetical protein CISIN_1g030941mg [Citrus sinensis][more]
gi|76160974|gb|ABA40450.1|3.5e-7483.95P23 tumor protein-like protein [Solanum tuberosum][more]
gi|568215190|ref|NP_001275182.1|4.6e-7483.33translationally-controlled tumor protein homolog [Solanum tuberosum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like_sf
IPR011323Mss4/transl-control_tumour
IPR018103Translation_control_tumour_CS
IPR018105Translational_control_tumour_p
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008017 microtubule binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G015040.1CmaCh06G015040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 44..205
score: 3.21
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3DG3DSA:2.170.150.10coord: 43..205
score: 1.0
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 162..184
scor
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 38..58
score: 2.7E-20coord: 97..116
score: 2.7E-20coord: 83..94
score: 2.7
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 44..205
score: 4.8
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 43..201
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G015040Cucsa.253020Cucumber (Gy14) v1cgycmaB0727
CmaCh06G015040Cla021747Watermelon (97103) v1cmawmB798
CmaCh06G015040Csa3G154390Cucumber (Chinese Long) v2cmacuB814
CmaCh06G015040MELO3C006670Melon (DHL92) v3.5.1cmameB763
CmaCh06G015040ClCG05G006160Watermelon (Charleston Gray)cmawcgB737
CmaCh06G015040CSPI03G14490Wild cucumber (PI 183967)cmacpiB826
CmaCh06G015040CmoCh06G015020Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G015040CmoCh14G016540Cucurbita moschata (Rifu)cmacmoB797
CmaCh06G015040Lsi05G015450Bottle gourd (USVL1VR-Ls)cmalsiB757
CmaCh06G015040Cp4.1LG03g11490Cucurbita pepo (Zucchini)cmacpeB837
CmaCh06G015040Cp4.1LG08g04970Cucurbita pepo (Zucchini)cmacpeB853
CmaCh06G015040MELO3C006670.2Melon (DHL92) v3.6.1cmamedB863
CmaCh06G015040CsaV3_3G014730Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G015040Cla97C05G087680Watermelon (97103) v2cmawmbB856
CmaCh06G015040Bhi01G000726Wax gourdcmawgoB1006
CmaCh06G015040CsGy3G014630Cucumber (Gy14) v2cgybcmaB427
CmaCh06G015040Carg20104Silver-seed gourdcarcmaB1155
CmaCh06G015040Carg17338Silver-seed gourdcarcmaB0849
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh06G015040CmaCh00G004010Cucurbita maxima (Rimu)cmacmaB028
CmaCh06G015040CmaCh14G016170Cucurbita maxima (Rimu)cmacmaB284
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G015040Watermelon (97103) v2cmawmbB865
CmaCh06G015040Wax gourdcmawgoB1002
CmaCh06G015040Cucurbita maxima (Rimu)cmacmaB369
CmaCh06G015040Cucurbita maxima (Rimu)cmacmaB554
CmaCh06G015040Cucurbita moschata (Rifu)cmacmoB810
CmaCh06G015040Cucurbita moschata (Rifu)cmacmoB837
CmaCh06G015040Melon (DHL92) v3.5.1cmameB747
CmaCh06G015040Watermelon (Charleston Gray)cmawcgB745
CmaCh06G015040Watermelon (97103) v1cmawmB811
CmaCh06G015040Cucurbita pepo (Zucchini)cmacpeB810
CmaCh06G015040Cucurbita pepo (Zucchini)cmacpeB822
CmaCh06G015040Bottle gourd (USVL1VR-Ls)cmalsiB741
CmaCh06G015040Melon (DHL92) v3.6.1cmamedB846
CmaCh06G015040Silver-seed gourdcarcmaB0094
CmaCh06G015040Silver-seed gourdcarcmaB0145
CmaCh06G015040Silver-seed gourdcarcmaB0986