ClCG05G006160 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G006160
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionTranslationally controlled tumor protein
LocationCG_Chr05 : 6115264 .. 6117168 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAACCCTGGCCTATAAATTGCCTGGCCTCGCCCATCTCAAACCCTCTCACGCTCCTGGTTGCCGTACTCTTCCTCTCCCCCAGATATCTTCTTTGCAGGAGCGATCCGGGAGTCAATTTTGCTATCATGTTGGTTTACACCGACCTTCTCTCTGGTAATTCTTCTACTATTTCCAATGAATCTAATGTTTTGGTTCTAGGGCTTCCATCTTCCTCTGTTAGGGTTTTCTTTTGTCTTTTTGGATCTGTGATTTTCTATGGATTCGTTTGTTGCCGTTTGGATCTGGAACATATTTTAGGCCAATCAATTTTTCTTTTACGGATTCACGTTGATAGAATAGAAATTTCATTGATTATTTAAAAACGAGGTTTATTATTAGCCGGGCTGTCGAGTTGTTTTGTAGTTCGGCCTTATTGTTAAAAGGCATCTGTCTCTTAGGGTTGGAGAATCTAATCCTTGATAGCTGCCTTTTATGAAAATATTGTGTTTTTTGATTCATGAATATGAATAGTAGAGATTAGGAGATTTTTTTCTATTGGTTTCTTTCCTATGTCTTGAAGTATTGTGATTGGTTATTTTCTTGATGATATTGTAGTAATATTTCTTAGATTTGATTTACACTGTGGACTTCTTTCTCTTCATTGGTCTCGAAGTAATACATGGATTTATTCAAATTTGTATATCAGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAGGAAATCGAGAATGGAATGATTTGGGAAGTCGATGGAAAGGTTTGTTATTTTTGTTTACTGTATCTCTTTTAATTAATGAACAAAGTGTGTTAATTAAATTGGATGGATATTGAGCACAATGCCTTACTCCTTTCTTAAAATGTTTTACTGCAGTGGGTCGTTCAAGGAGCGATTGATGTGGATATTGGTGCTAATCCTTCTGCTGAAGGTGCCGGTGAGGACGAAGGTGTTGATGATCAGGCTGTGAAGGTGGTCGACATTGTTGACACTTTCCGGCTTCAGGTAGGCATGCTCCTGATTAAGGTTCAGTGATTATTGCAAGCATTTAAGCATGGTTTATTTCAATTCTGGGTTTATAGGAGCAACCTCCTTTGGACAAGAAGTTGTTCATTGCATACATTAAGAAGTATATCAAATTACTGACACCTAAGCTGGAAGGGGAGAAACAAGAGGCATTTAAGAAGAACATTGAGGGAGCAACTAAGTATCTGCTTGCAAAGCTCAAGGACTTGCAATTGTAAGTACTTCTATAGTTGTCTATTTCTCTGTTTCTGTCGAACAGAAGATTTTTCCCGTTAAAGCTACTAAGTGATTCTCTCCTAACAGCACCAACAACTAAGTGATTTTTAGTGTTTTTAGAATTCAACTGTCTAAAAGCGGTTCTAAACTGACTTTTATCTATGAAACACCAACACTAACAGAGCATTGTTAATTAAAACAAGTCACATGGATGTTAATTCTTAATTTGTTTGGTAAAAATTTCTGAACCCTTTTTGGTTGGACTATCGTTTTGGTTCAAGTTTTTGTATCATTAGAACGATTCCTTAGGTACTCTTACGCTCTTTTGCAGCTTCGTTGGGGAGAGTATGGCTGACGATTGCTCTATCGTATTTGCATACTACAAGGAAGGAGCTACTGAACCAACATTTTTATACCTTGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAGAACAAAACTTTGAAGCAGAATGCTTCATGTAGCATTATTAGTTTCTACTATATTTGCCTTTTTCTCATGACATTTGAATTTGGATGGTTTGGGCTGTTTTTGTTTTGGTTTATTTTGGGTTTCCTTGTTTTGACCTTGTTTACTGGGAGATGTTCTGGTGAGTGCAAAAGTTTACTCTATTTTTATGCCTAATGAATCTCTATTTTTATCA

mRNA sequence

CAAAACCCTGGCCTATAAATTGCCTGGCCTCGCCCATCTCAAACCCTCTCACGCTCCTGGTTGCCGTACTCTTCCTCTCCCCCAGATATCTTCTTTGCAGGAGCGATCCGGGAGTCAATTTTGCTATCATGTTGGTTTACACCGACCTTCTCTCTGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAGGAAATCGAGAATGGAATGATTTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCGATTGATGTGGATATTGGTGCTAATCCTTCTGCTGAAGGTGCCGGTGAGGACGAAGGTGTTGATGATCAGGCTGTGAAGGTGGTCGACATTGTTGACACTTTCCGGCTTCAGGAGCAACCTCCTTTGGACAAGAAGTTGTTCATTGCATACATTAAGAAGTATATCAAATTACTGACACCTAAGCTGGAAGGGGAGAAACAAGAGGCATTTAAGAAGAACATTGAGGGAGCAACTAAGTATCTGCTTGCAAAGCTCAAGGACTTGCAATTCTTCGTTGGGGAGAGTATGGCTGACGATTGCTCTATCGTATTTGCATACTACAAGGAAGGAGCTACTGAACCAACATTTTTATACCTTGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAGAACAAAACTTTGAAGCAGAATGCTTCATGTAGCATTATTAGTTTCTACTATATTTGCCTTTTTCTCATGACATTTGAATTTGGATGGTTTGGGCTGTTTTTGTTTTGGTTTATTTTGGGTTTCCTTGTTTTGACCTTGTTTACTGGGAGATGTTCTGGTGAGTGCAAAAGTTTACTCTATTTTTATGCCTAATGAATCTCTATTTTTATCA

Coding sequence (CDS)

ATGTTGGTTTACACCGACCTTCTCTCTGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAGGAAATCGAGAATGGAATGATTTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCGATTGATGTGGATATTGGTGCTAATCCTTCTGCTGAAGGTGCCGGTGAGGACGAAGGTGTTGATGATCAGGCTGTGAAGGTGGTCGACATTGTTGACACTTTCCGGCTTCAGGAGCAACCTCCTTTGGACAAGAAGTTGTTCATTGCATACATTAAGAAGTATATCAAATTACTGACACCTAAGCTGGAAGGGGAGAAACAAGAGGCATTTAAGAAGAACATTGAGGGAGCAACTAAGTATCTGCTTGCAAAGCTCAAGGACTTGCAATTCTTCGTTGGGGAGAGTATGGCTGACGATTGCTCTATCGTATTTGCATACTACAAGGAAGGAGCTACTGAACCAACATTTTTATACCTTGCCCCAGGTTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGVDDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKYLLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC
Homology
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BLAST of ClCG05G006160 vs. Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-81
Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGA+DVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKLLTPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESM DD  IVFAYY+EGAT+PTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.9e-79
Identity = 142/168 (84.52%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DL+SGDELLSDSFPYKEIENGMIWEV+GKWVV+GA+DVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK+F++ IKKYIK LTP L+GE+QEAFK  IEGA KY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL K+KDLQFFVGESMADD ++VFAYYKEGAT+PTFLY+APGLKEVKC
Sbjct: 121 LLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 290.8 bits (743), Expect = 9.5e-78
Identity = 138/168 (82.14%), Postives = 151/168 (89.88%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEI+NGM+WEV GKWVVQGA+DV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+ YIK+YIK LTPKLEGE QEAFKKNIE ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KLKD QFFVGE M DD ++VFAYYK+G+ +PTFLYLAPGLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of ClCG05G006160 vs. Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 6.1e-77
Identity = 138/168 (82.14%), Postives = 151/168 (89.88%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPY+EIENG++WEVDGKWVVQGAIDVDIGANPSAEG G+DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+ ++K+YIK L+ KL+ EKQE FKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESM DD  +VFAYYK+GAT+PTFLY + GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-76
Identity = 139/168 (82.74%), Postives = 150/168 (89.29%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY D LSGDELLSDSFPY+E+ENG++WEVDG WVVQGA+DVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK FIAYIK+YIK LT KLEGE+ +AFKKN+E ATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KLKDLQFFVGESM DD S+VFAYY+EGA +PTFLY A GLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. TrEMBL
Match: W1P5L1_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00045p00225280 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.7e-78
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGM+WEVDGKWVVQGAIDVDIGANPSAEGA E EGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEMENGMLWEVDGKWVVQGAIDVDIGANPSAEGADEGEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK+F++YIKKYIKLLTPKL+ E+QE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKMFVSYIKKYIKLLTPKLDTEQQEIFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESM DD S+VFAYYKEGAT+PTFLY A GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. TrEMBL
Match: A0A068TRC3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025805001 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.7e-78
Identity = 143/168 (85.12%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG++WEV+GKWVVQGA++VDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVEVDIGANPSAEGCGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AYIKKYIKLLTPK++ EKQE FKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKLLTPKIDAEKQEHFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMADD ++VFAYYK+GAT+PTFLY   GLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMADDSTLVFAYYKDGATDPTFLYFGVGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. TrEMBL
Match: A0A068V9P5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00000655001 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.9e-77
Identity = 146/168 (86.90%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLLSGDELLSDSFPYKEIENGM+WEV+GKWVVQGA++V+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVEVNIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+AYIKKYIK L+PKLE EK +AFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVAYIKKYIKNLSPKLEPEKLDAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESM DD SIVFAYYKEGAT+PTFLYLAPGLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSIVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. TrEMBL
Match: A0A151U4Q6_CAJCA (Translationally-controlled tumor protein isogeny OS=Cajanus cajan GN=KK1_006983 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.3e-77
Identity = 143/168 (85.12%), Postives = 155/168 (92.26%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENGM+WEVDGKWVVQGA++VDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVDGKWVVQGAVNVDIGANPSAEGGDEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK FI Y+K+YIKLLTPKLE EKQE FKK+IEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFITYMKRYIKLLTPKLEAEKQELFKKHIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESM DD S+VFAYYKEGATEPTF+Y A GLKE+KC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYKEGATEPTFIYFAYGLKEIKC 168

[Close]
BLAST of ClCG05G006160 vs. TrEMBL
Match: M5XPD7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009639mg PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 7.3e-77
Identity = 139/168 (82.74%), Postives = 154/168 (91.67%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ NG++WEVDGKWVVQGA+DVDIGANPSAEG GEDEGV
Sbjct: 116 MLVYQDLLTGDELLSDSFPYKEVHNGVLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 175

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQ VKVVDIVDTFRLQEQPP DKK F+ ++K+YIKLLTPKLEGEKQE FKKNIEGATK+
Sbjct: 176 DDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEKQEEFKKNIEGATKF 235

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESM DD  +VFAYYKEGAT+PTF+Y A GL+EVKC
Sbjct: 236 LLSKLSDLQFFVGESMHDDGGLVFAYYKEGATDPTFIYFAHGLREVKC 283

[Close]
BLAST of ClCG05G006160 vs. TAIR10
Match: AT3G16640.1 (AT3G16640.1 translationally controlled tumor protein)

HSP 1 Score: 267.7 bits (683), Expect = 4.8e-72
Identity = 131/168 (77.98%), Postives = 140/168 (83.33%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG++WEV+GKWV  GA+DV+IGANPSAE  GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DD   KVVDIVDTFRLQEQP  DKK FIAYIKKYIKLLTPKL  E Q  FKK IEGATK+
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL +L D QFFVGE M DD ++VFAYYKEG+T PTFLY A GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. TAIR10
Match: AT3G05540.1 (AT3G05540.1 Methionine sulfoxide reductase (MSS4-like) family protein)

HSP 1 Score: 263.5 bits (672), Expect = 9.1e-71
Identity = 127/169 (75.15%), Postives = 148/169 (87.57%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY D+L+GDELLSDSFPYKEIENGM+WEV+GKWVV+GA+D DIGANP  EG GEDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEG-GEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDI+DTFRLQEQP  DKK F+ ++K+YIK L+PKL+ E QE FKK+IE ATK+
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLAKLKDLQFFVGESM-ADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           L++KLKD QFFVGESM  ++ S+VFAYY+EGAT+PTFLYLA GLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]
BLAST of ClCG05G006160 vs. NCBI nr
Match: gi|115502853|sp|Q2PS27.1|TCTP_CUCMA (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-79
Identity = 148/168 (88.10%), Postives = 158/168 (94.05%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGA+DVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKLLTPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESM DD  IVFAYY+EGAT+PTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. NCBI nr
Match: gi|586680345|ref|XP_006840565.1| (PREDICTED: translationally-controlled tumor protein homolog [Amborella trichopoda])

HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGM+WEVDGKWVVQGAIDVDIGANPSAEGA E EGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEMENGMLWEVDGKWVVQGAIDVDIGANPSAEGADEGEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK+F++YIKKYIKLLTPKL+ E+QE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKMFVSYIKKYIKLLTPKLDTEQQEIFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESM DD S+VFAYYKEGAT+PTFLY A GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. NCBI nr
Match: gi|661897148|emb|CDO98860.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78
Identity = 143/168 (85.12%), Postives = 157/168 (93.45%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG++WEV+GKWVVQGA++VDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVEVDIGANPSAEGCGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AYIKKYIKLLTPK++ EKQE FKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKLLTPKIDAEKQEHFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMADD ++VFAYYK+GAT+PTFLY   GLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMADDSTLVFAYYKDGATDPTFLYFGVGLKEVKC 168

[Close]
BLAST of ClCG05G006160 vs. NCBI nr
Match: gi|747086921|ref|XP_011090981.1| (PREDICTED: translationally-controlled tumor protein homolog [Sesamum indicum])

HSP 1 Score: 297.0 bits (759), Expect = 2.1e-77
Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLLSGDELLSDSFPYKEIENG +WEV+GKWVV+GA+DVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIENGALWEVEGKWVVKGAVDVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AYIKKYIKLL+ KLEGEKQ+ FKK IEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKLLSNKLEGEKQDHFKKTIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+K+KDLQFFVGESMADDC++VFAYYKEGA +PTFLY A GLKE+KC
Sbjct: 121 LLSKIKDLQFFVGESMADDCTLVFAYYKEGAVDPTFLYFAHGLKEIKC 168

[Close]
BLAST of ClCG05G006160 vs. NCBI nr
Match: gi|661879064|emb|CDP17189.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 296.6 bits (758), Expect = 2.8e-77
Identity = 146/168 (86.90%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGEDEGV 60
           MLVY DLLSGDELLSDSFPYKEIENGM+WEV+GKWVVQGA++V+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVEVNIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLLTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+AYIKKYIK L+PKLE EK +AFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVAYIKKYIKNLSPKLEPEKLDAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMADDCSIVFAYYKEGATEPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESM DD SIVFAYYKEGAT+PTFLYLAPGLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSIVFAYYKEGATDPTFLYLAPGLKEVKC 168

The following BLAST results are available for this feature:
BLAST of ClCG05G006160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCTP_CUCMA1.1e-8188.10Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=... [more]
TCTP_CUCME3.9e-7984.52Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV... [more]
TCTP_SOLTU9.5e-7882.14Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE... [more]
TCTP_ORYSJ6.1e-7782.14Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica... [more]
TCTP_HORVU1.8e-7682.74Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2... [more]
BLAST of ClCG05G006160 vs. TrEMBL
Match NameE-valueIdentityDescription
W1P5L1_AMBTC1.7e-7886.90Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00045p00225280 PE=3 SV=... [more]
A0A068TRC3_COFCA1.7e-7885.12Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025805001 PE=3 SV=1[more]
A0A068V9P5_COFCA1.9e-7786.90Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00000655001 PE=3 SV=1[more]
A0A151U4Q6_CAJCA3.3e-7785.12Translationally-controlled tumor protein isogeny OS=Cajanus cajan GN=KK1_006983 ... [more]
M5XPD7_PRUPE7.3e-7782.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009639mg PE=3 SV=1[more]
BLAST of ClCG05G006160 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16640.14.8e-7277.98 translationally controlled tumor protein[more]
AT3G05540.19.1e-7175.15 Methionine sulfoxide reductase (MSS4-like) family protein[more]
BLAST of ClCG05G006160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|115502853|sp|Q2PS27.1|TCTP_CUCMA1.7e-7988.10RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN... [more]
gi|586680345|ref|XP_006840565.1|2.5e-7886.90PREDICTED: translationally-controlled tumor protein homolog [Amborella trichopod... [more]
gi|661897148|emb|CDO98860.1|2.5e-7885.12unnamed protein product [Coffea canephora][more]
gi|747086921|ref|XP_011090981.1|2.1e-7784.52PREDICTED: translationally-controlled tumor protein homolog [Sesamum indicum][more]
gi|661879064|emb|CDP17189.1|2.8e-7786.90unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like_sf
IPR011323Mss4/transl-control_tumour
IPR018103Translation_control_tumour_CS
IPR018105Translational_control_tumour_p
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010252 auxin homeostasis
biological_process GO:0040014 regulation of multicellular organism growth
biological_process GO:0008150 biological_process
biological_process GO:0008283 cell proliferation
biological_process GO:0030154 cell differentiation
biological_process GO:0048768 root hair cell tip growth
biological_process GO:0009735 response to cytokinin
biological_process GO:0090333 regulation of stomatal closure
biological_process GO:0007346 regulation of mitotic cell cycle
biological_process GO:0001558 regulation of cell growth
biological_process GO:0031117 positive regulation of microtubule depolymerization
biological_process GO:0009860 pollen tube growth
biological_process GO:0048527 lateral root development
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009819 drought recovery
cellular_component GO:0009579 thylakoid
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005829 cytosol
cellular_component GO:0090406 pollen tube
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009507 chloroplast
cellular_component GO:0048046 apoplast
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G006160.1ClCG05G006160.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 1..168
score: 1.85
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3DG3DSA:2.170.150.10coord: 1..168
score: 9.7
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01002TCTP_1coord: 45..55
scor
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 1..21
score: 1.5E-25coord: 46..57
score: 1.5E-25coord: 60..79
score: 1.5
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 1..168
score: 1.7
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 1..164
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G006160Csa3G154390Cucumber (Chinese Long) v2cuwcgB222
ClCG05G006160MELO3C006670Melon (DHL92) v3.5.1mewcgB427
ClCG05G006160Cla021747Watermelon (97103) v1wcgwmB286
ClCG05G006160Cla97C05G087680Watermelon (97103) v2wcgwmbB229
ClCG05G006160Bhi01G000726Wax gourdwcgwgoB426
ClCG05G006160CSPI03G14490Wild cucumber (PI 183967)cpiwcgB226
ClCG05G006160CSPI01G26370Wild cucumber (PI 183967)cpiwcgB069
ClCG05G006160Cucsa.253020Cucumber (Gy14) v1cgywcgB451
ClCG05G006160CmaCh00G004010Cucurbita maxima (Rimu)cmawcgB003
ClCG05G006160CmaCh06G015040Cucurbita maxima (Rimu)cmawcgB737
ClCG05G006160CmaCh14G016170Cucurbita maxima (Rimu)cmawcgB233
ClCG05G006160CmoCh06G015020Cucurbita moschata (Rifu)cmowcgB743
ClCG05G006160CmoCh14G016540Cucurbita moschata (Rifu)cmowcgB219
ClCG05G006160Lsi05G015450Bottle gourd (USVL1VR-Ls)lsiwcgB333
ClCG05G006160Cp4.1LG03g11490Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G006160Cp4.1LG08g04970Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G006160CsGy3G014630Cucumber (Gy14) v2cgybwcgB203
ClCG05G006160MELO3C006670.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G006160Carg20104Silver-seed gourdcarwcgB0807
ClCG05G006160Carg17338Silver-seed gourdcarwcgB0588
ClCG05G006160CsaV3_3G014730Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G006160Watermelon (97103) v2wcgwmbB238
ClCG05G006160Wax gourdwcgwgoB418
ClCG05G006160Watermelon (Charleston Gray)wcgwcgB160
ClCG05G006160Cucurbita maxima (Rimu)cmawcgB001
ClCG05G006160Cucurbita maxima (Rimu)cmawcgB320
ClCG05G006160Cucurbita maxima (Rimu)cmawcgB796
ClCG05G006160Cucurbita moschata (Rifu)cmowcgB316
ClCG05G006160Cucurbita moschata (Rifu)cmowcgB792
ClCG05G006160Melon (DHL92) v3.5.1mewcgB121
ClCG05G006160Watermelon (97103) v1wcgwmB311
ClCG05G006160Cucurbita pepo (Zucchini)cpewcgB139
ClCG05G006160Cucurbita pepo (Zucchini)cpewcgB291
ClCG05G006160Bottle gourd (USVL1VR-Ls)lsiwcgB017
ClCG05G006160Melon (DHL92) v3.6.1medwcgB115
ClCG05G006160Silver-seed gourdcarwcgB0072
ClCG05G006160Silver-seed gourdcarwcgB0680