Carg20104 (gene) Silver-seed gourd

Overview
NameCarg20104
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranslationally-controlled tumor protein homolog
LocationCucurbita_argyrosperma_scaffold_168 : 166085 .. 167794 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATCTTTGGATTGCCGTACTCCCTCGCCTCATAAATTTTCAAGAGGGATCCGGGAATCTACTCTGCAACCATGTTGGTTTACACCGATCTTCTCTCCGGTATTGATATTATGAGTTTTCGATTATTTATGTTTTTGTTTAGTATCTGTATTTTTGTATAGGATATCGGTTTTGAGCTGTTAGGGTTTTCTGTTGTTGTGTGGTTTATATGGATTCTTTGTATATCGATCTGATACATAATTTAGAGTTGTTGATTTTGGTTTAACTGATACCATTTGATTCATGCCATACAAGATTTTACAAATATGCGTAATAGCCTTTTGATTAGCTGTTGGGGAGAGAGCTCTCTTCGGATTGAAGAAGTATATTTCTCATAATCGATTGTGTTCTAGAGTATTTGATGTTATTGGCGTAAAATTTTTGGACTTTCTTCTTTTCACTTGTGTGAAGGATTTGTTTAAATTCCTTTTGATTAGCTGTTGGAGAGAGCTCTCTGTGGATTGAAGACGTATATTTCTCATAATCGATTGTGTTCTAGAGTATTGGATGTTATTGGTGTAAAATTTTTGGACTCTGTTCTTTTAATTTGTGTGAAGGATTTGTTTAAATTTTATATCAGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGGTTAGTTATTTTCGTTTAATGTAATTTTTTTTCACGTTTCATGTGCGTAAGAACAATTTTTTTTGTGTTAATGGTACCAAGTTTTTAGTTTCTTGCACAATTTATTGCAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATTGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTTGTCGACATTGTCGATACCTTCAGGCTTCAGGTAGGCATGCCTCCTCCTTAAGAAGGTTCAAGGATTATGCAAACATTCAAGCAGAATTTATTAATTTATTTCAATTTGGGTTTCCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTCCTTGCAAAGCTCAAGGACTTGCAATTGTAAGTATTTCAGTAGTTGTCTATGTGTTCTTGGTTTATGCCAACCAAATCTTCTAACCTGTTGTGGTCGATTTGGTTCGAGTTTTTGTATCACTAGAACGATACCTAACATACGATATGTTGTTTTGCAGCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAAGAACAAAAGTTCATAGCAGAATGCTTCATATAGCATTGTTAGTTTCTACTATTTTTGCCTGTTCTCATGACATTTGAATTTTTGAATGGTTTGGGCTGTTTTCTTTTTTGTTTTGGTTTAGTTTGGGTTTCTTTGTTTTGACCTTTGTTTACTGAGAGCTTTTGTCCTGCTGAATGCGAAAGTTTACTCTATTTATGTGCCCAAGAATCTCTACTTTTATCGTATCAACTGCTCGTTATTATTCGTCCGTTCTTCGATTTGATAACCCAAAATGGTTCTCT

mRNA sequence

TCATCTTTGGATTGCCGTACTCCCTCGCCTCATAAATTTTCAAGAGGGATCCGGGAATCTACTCTGCAACCATGTTGGTTTACACCGATCTTCTCTCCGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATTGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTTGTCGACATTGTCGATACCTTCAGGCTTCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTCCTTGCAAAGCTCAAGGACTTGCAATTCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAAGAACAAAAGTTCATAGCAGAATGCTTCATATAGCATTGTTAGTTTCTACTATTTTTGCCTGTTCTCATGACATTTGAATTTTTGAATGGTTTGGGCTGTTTTCTTTTTTGTTTTGGTTTAGTTTGGGTTTCTTTGTTTTGACCTTTGTTTACTGAGAGCTTTTGTCCTGCTGAATGCGAAAGTTTACTCTATTTATGTGCCCAAGAATCTCTACTTTTATCGTATCAACTGCTCGTTATTATTCGTCCGTTCTTCGATTTGATAACCCAAAATGGTTCTCT

Coding sequence (CDS)

ATGTTGGTTTACACCGATCTTCTCTCCGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATTGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTTGTCGACATTGTCGATACCTTCAGGCTTCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTCCTTGCAAAGCTCAAGGACTTGCAATTCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGVDDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKYLLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC
Homology
[Close]
BLAST of Carg20104 vs. NCBI nr
Match: XP_022956345.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526154.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV
Sbjct: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC
Sbjct: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of Carg20104 vs. NCBI nr
Match: XP_022937958.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973732.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_022975167.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_023539947.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 8.0e-81
Identity = 151/168 (89.88%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD QFFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg20104 vs. NCBI nr
Match: Q2PS27.1 (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP >ABC02401.1 translationally controlled tumor protein [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 2.3e-80
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg20104 vs. NCBI nr
Match: XP_024962290.1 (translationally-controlled tumor protein homolog [Cynara cardunculus var. scolymus])

HSP 1 Score: 304.7 bits (779), Expect = 2.0e-79
Identity = 149/168 (88.69%), Postives = 158/168 (94.05%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENGM+WEV+GKWVVQGAV VDIGANPSAEG  +DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVSVDIGANPSAEGGEDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AYIKKYIKL+TPKLE EKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKLLTPKLEPEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD +MVFAYYKEGATDPTFLYLA GLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGTMVFAYYKEGATDPTFLYLAYGLKEVKC 168

[Close]
BLAST of Carg20104 vs. NCBI nr
Match: XP_006840565.1 (translationally-controlled tumor protein homolog [Amborella trichopoda] >ERN02240.1 hypothetical protein AMTR_s00045p00225280 [Amborella trichopoda])

HSP 1 Score: 304.3 bits (778), Expect = 2.6e-79
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGM+WEVDGKWVVQGA+DVDIGANPSAEGA E EGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEMENGMLWEVDGKWVVQGAIDVDIGANPSAEGADEGEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK+F++YIKKYIKL+TPKL+ E+QE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKMFVSYIKKYIKLLTPKLDTEQQEIFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDDSS+VFAYYKEGATDPTFLY A GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TAIR10
Match: AT3G16640.1 (translationally controlled tumor protein)

HSP 1 Score: 271.6 bits (693), Expect = 3.4e-73
Identity = 133/168 (79.17%), Postives = 145/168 (86.31%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG++WEV+GKWV  GAVDV+IGANPSAE  GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DD   KVVDIVDTFRLQEQP  DKK FIAYIKKYIKL+TPKL  E Q  FKK IEGATK+
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL +L D QFFVGE MHDDS++VFAYYKEG+T+PTFLY A GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TAIR10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein)

HSP 1 Score: 263.5 bits (672), Expect = 9.1e-71
Identity = 127/169 (75.15%), Postives = 150/169 (88.76%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY D+L+GDELLSDSFPYKEIENGM+WEV+GKWVV+GA+D DIGANP  EG GEDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEG-GEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDI+DTFRLQEQP  DKK F+ ++K+YIK ++PKL+ E QE FKK+IE ATK+
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLAKLKDLQFFVGESMH-DDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           L++KLKD QFFVGESM  ++ S+VFAYY+EGATDPTFLYLA GLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

[Close]
BLAST of Carg20104 vs. Swiss-Prot
Match: sp|Q2PS27|TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=TCTP PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.6e-83
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg20104 vs. Swiss-Prot
Match: sp|Q9M5I8|TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-79
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DL+SGDELLSDSFPYKEIENGMIWEV+GKWVV+GAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK+F++ IKKYIK +TP L+GE+QEAFK  IEGA KY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL K+KDLQFFVGESM DDS+MVFAYYKEGATDPTFLY+APGLKEVKC
Sbjct: 121 LLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]
BLAST of Carg20104 vs. Swiss-Prot
Match: sp|P43349|TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-79
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEI+NGM+WEV GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+ YIK+YIK +TPKLEGE QEAFKKNIE ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KLKD QFFVGE MHDDS++VFAYYK+G+ DPTFLYLAPGLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Carg20104 vs. Swiss-Prot
Match: sp|P35681|TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TCTP PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.6e-78
Identity = 138/168 (82.14%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPY+EIENG++WEVDGKWVVQGA+DVDIGANPSAEG G+DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+ ++K+YIK ++ KL+ EKQE FKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDD  +VFAYYK+GATDPTFLY + GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]
BLAST of Carg20104 vs. Swiss-Prot
Match: sp|Q9M5G3|TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare OX=4513 GN=TCTP PE=2 SV=2)

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-77
Identity = 141/168 (83.93%), Postives = 153/168 (91.07%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY D LSGDELLSDSFPY+E+ENG++WEVDG WVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK FIAYIK+YIK +T KLEGE+ +AFKKN+E ATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KLKDLQFFVGESMHDD S+VFAYY+EGA DPTFLY A GLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TrEMBL
Match: tr|W1P5L1|W1P5L1_AMBTC (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00045p00225280 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.7e-79
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGM+WEVDGKWVVQGA+DVDIGANPSAEGA E EGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEMENGMLWEVDGKWVVQGAIDVDIGANPSAEGADEGEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK+F++YIKKYIKL+TPKL+ E+QE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKMFVSYIKKYIKLLTPKLDTEQQEIFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDDSS+VFAYYKEGATDPTFLY A GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TrEMBL
Match: tr|A0A218WIJ1|A0A218WIJ1_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018351 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 5.0e-79
Identity = 146/168 (86.90%), Postives = 158/168 (94.05%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DL++GDELLSDSFPYKEIENGM+WEV+GKWVV+GAVDVDIGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLITGDELLSDSFPYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AY+KKYIKL+TPKLE EKQE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYVKKYIKLITPKLEPEKQELFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDDS++VFAYYKEGATDPTFLY A GLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDSTLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TrEMBL
Match: tr|A0A068V9P5|A0A068V9P5_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00000655001 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.2e-78
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLLSGDELLSDSFPYKEIENGM+WEV+GKWVVQGAV+V+IGANPSAEG  EDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVEVNIGANPSAEGGEEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+AYIKKYIK ++PKLE EK +AFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVAYIKKYIKNLSPKLEPEKLDAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD S+VFAYYKEGATDPTFLYLAPGLKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSIVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TrEMBL
Match: tr|A0A251QWX9|A0A251QWX9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G134900 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.2e-78
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ NG++WEVDGKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEVHNGVLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQ VKVVDIVDTFRLQEQPP DKK F+ ++K+YIKL+TPKLEGEKQE FKKNIEGATK+
Sbjct: 61  DDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEKQEEFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD  +VFAYYKEGATDPTF+Y A GL+EVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGGLVFAYYKEGATDPTFIYFAHGLREVKC 168

[Close]
BLAST of Carg20104 vs. TrEMBL
Match: tr|M5XPD7|M5XPD7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa009639mg PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.2e-78
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ NG++WEVDGKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 116 MLVYQDLLTGDELLSDSFPYKEVHNGVLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 175

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQ VKVVDIVDTFRLQEQPP DKK F+ ++K+YIKL+TPKLEGEKQE FKKNIEGATK+
Sbjct: 176 DDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEKQEEFKKNIEGATKF 235

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KL DLQFFVGESMHDD  +VFAYYKEGATDPTF+Y A GL+EVKC
Sbjct: 236 LLSKLSDLQFFVGESMHDDGGLVFAYYKEGATDPTFIYFAHGLREVKC 283

The following BLAST results are available for this feature:
BLAST of Carg20104 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956345.11.6e-89100.00translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526... [more]
XP_022937958.18.0e-8189.88translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973... [more]
Q2PS27.12.3e-8089.29RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN... [more]
XP_024962290.12.0e-7988.69translationally-controlled tumor protein homolog [Cynara cardunculus var. scolym... [more]
XP_006840565.12.6e-7987.50translationally-controlled tumor protein homolog [Amborella trichopoda] >ERN0224... [more]
BLAST of Carg20104 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16640.13.4e-7379.17translationally controlled tumor protein[more]
AT3G05540.19.1e-7175.15Methionine sulfoxide reductase (MSS4-like) family protein[more]
BLAST of Carg20104 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q2PS27|TCTP_CUCMA7.6e-8389.29Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=... [more]
sp|Q9M5I8|TCTP_CUCME3.0e-7985.71Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP... [more]
sp|P43349|TCTP_SOLTU3.0e-7983.93Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN... [more]
sp|P35681|TCTP_ORYSJ5.6e-7882.14Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica... [more]
sp|Q9M5G3|TCTP_HORVU1.6e-7783.93Translationally-controlled tumor protein homolog OS=Hordeum vulgare OX=4513 GN=T... [more]
BLAST of Carg20104 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|W1P5L1|W1P5L1_AMBTC1.7e-7987.50Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00045p00225280... [more]
tr|A0A218WIJ1|A0A218WIJ1_PUNGR5.0e-7986.90Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018351 PE=3 SV=1[more]
tr|A0A068V9P5|A0A068V9P5_COFCA4.2e-7887.50Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00000655001 PE=3 ... [more]
tr|A0A251QWX9|A0A251QWX9_PRUPE7.2e-7883.93Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G134900 PE=3 SV=1[more]
tr|M5XPD7|M5XPD7_PRUPE7.2e-7883.93Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa009639mg PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like_sf
IPR034737TCTP
IPR018103Translation_control_tumour_CS
IPR011323Mss4/transl-control_tumour
IPR018105Translational_control_tumour_p
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20104-RACarg20104-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 1..21
score: 63.78
coord: 46..57
score: 67.26
coord: 60..79
score: 60.36
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 1..164
e-value: 4.3E-55
score: 186.4
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 1..168
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3DG3DSA:2.170.150.10coord: 1..168
e-value: 1.6E-55
score: 189.8
NoneNo IPR availablePANTHERPTHR11991:SF0TRANSLATIONALLY-CONTROLLED TUMOR PROTEINcoord: 1..168
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01002TCTP_1coord: 45..55
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 125..147
IPR034737Translationally controlled tumour protein (TCTP) domainPROSITEPS51797TCTP_3coord: 1..168
score: 59.72
IPR011057Mss4-like superfamilySUPERFAMILYSSF51316Mss4-likecoord: 1..168