Cp4.1LG08g01550 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g01550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Acyl-CoA thioesterase
Location	Cp4.1LG08 : 3354627 .. 3357556 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACGTACAAATTTCTCGCAAATGTTTGGTAAATTATCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATCCAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTAAGTTCTCAATTCTTTTTTTCAAGTTTGTTTTCTCGTCGACTTTAGGAAGAGAATTTTGGTATTCGGTTTATACTATTGCGTATTCCTTGTATCTGATTTGAATTGAATTGATATCTTTGGGGACTTGAAAAATTAGCTATTCATCATTAGAGCGGAAATAGCTCAGAAAATGAGGTGTTTGGTTAGAATCGAAACAATATTTTTGAGAACTTGAAAGTTCACTATTCATCTATCGTTATAGTGATGTCTTTGGTTGCTGAGAAAATGAAGTATCTGATTTGAATTGAGATGATACATTTGGAAACTTTCAAATTTTCTGTTCATCGTTATACTAATCTGTTTGCTCGCCGTGAAAATGTGGTGATTGATTTGAATCGGAACAGCTTCCACGGGAACTTGAAAACAAAGCATTCATCATCATGGCGGTCTATTTGTTTGCCGAGAATGTGTGCCTTTTCAAATTCTCGTTATTTGCGTCTTTCAGTTTGAGTTCGTGTGGATTCATCTATCTGATGAATTAAAAACGGAATATCAATATGTTTGCATTCACATTAACAACAGGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGTGAGTAAATTTTAAGTAATTGCTGTGCTTCCTTATGATTTGTTTGAGTTGGGGGGTGCAAGTAGGTTAGTTAAGCTGAGGAAACTGACTCTCGAATTGACCAAAACTGAGTCCAACCAATCAAAGCCATCAAAACTAACCAAAATTGAAATAAGCCACATCCAACAAAGTCAAATGGATCAAGAATGAGAATTCAAATTGAATGAATTGAATTGGTTAATTCAGCCGGTTTTGGCAATTTCGGTTTCGGGAGCTGGGACGTGTTTTGATGGAAACTGGATGTATAAATTTCTTAGACGTTAGAGTCCTCAGATTGTTTTGCTGGTCCTGCATGCTTAAACCTTTTGTGTACCTAGCCATACATGGGTGGGAGGGTTGCATGATTCTACCGGTGGCAATGGTTTATAACTTGAGACAGGGCCATTTTATCTTCTTATGATTTGAAACTGATATTATGATGGTGTCTATTTTTTGTCGAATGGTATATTTCCATGGCTTTGCTGACTTTAGCTCAGTTCCAGCCACCTTGCGCTTGTAGTTTATGGGAAAATACCATTCATTTTCTTTATTAGGAGGATTAAGGGAGATACATTCATTCAAATCATGAATTTTCAAATAGAGAGATCAAGAATTAAATCATAATTACCACCCTCTGCAATCCTATAGGTATAACATCAGTAATATGATTGCCACCACACTTCAGATCAGAGCAACAAATGGGACTGAGTTAGGTTGGATGTTTTAGGACACAAACATAGTAGTTAGGTACCATGTGAACAAGAAGGGTCTGAGTACATAACACAAATATAAATATAACTAGGTGCTATGACCAAGCCTCGAGTACATCAATGATTGCATCTAGTGTTCGATTCAGACTTCGGTACCGATCAACTTATGGAGGATATGAAAGATGGTATTTCGATCGATTTTGTTGTTCAAAGAATGGTTTCGGCATTCACATCCAGGAAAGTATGAACACACACAAGAAAAAACCATCGATACAATACAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGCAGGGGTGCGTTGGTATCGTATATATATAAAAGGCTACCTGTTGGTTTCACAATTCCATTGCCTTAACTACTTCCTGAACCTTTTAGTCTCTCCTGTAAAGAAAGGATAGGGGAAGGATTTCATATGCGAGTTAAGGAGAATGAAGAAAGGATAGCTTGTGACCTTCTTTCAAAATCGAAGTACAGTGATCTGCTTTAACCGCTGAATGACTTCCAATTGGTATTTGAGTCATACTTGTGAATTTAAATGCAGTTTTGATTGTTCAAGTAGCTTGCTTATGATTAAAAATCTTAGCTCTACATACCTTTTCACTCAATTTGAGCTTTACCAAGATCATGCTATCTTCCACGACCTTACTTAAACAGGACCTGTTCTTTAGAAGTTTTCTGAAAAATTGTGTTGTTGCAGGCAGAGGTTGTGGTAGACGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTATGTGCTTTTATTCTGTTTGAACAAACATGTCAAATATTTGTACTTGTGTAATGTTGAAAAGAGTAGGCAAATATATTGATTAGAAGCTTGATTATCCTTGTATACTATTTATAATCTAGACAAAATACTGTTGTTCCATGCTGTATTCATAAAGAAATCTTAGTTGCTATAGAGTTTGGACTTCAAGATACTCGA

mRNA sequence

ATACGTACAAATTTCTCGCAAATGTTTGGTAAATTATCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATCCAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGACGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTATGTGCTTTTATTCTGTTTGAACAAACATGTCAAATATTTGTACTTGTGTAATGTTGAAAAGAGTAGGCAAATATATTGATTAGAAGCTTGATTATCCTTGTATACTATTTATAATCTAGACAAAATACTGTTGTTCCATGCTGTATTCATAAAGAAATCTTAGTTGCTATAGAGTTTGGACTTCAAGATACTCGA

Coding sequence (CDS)

ATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATCCAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGACGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAA

Protein sequence

MAKPSSPAASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL

Homology

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BLAST of Cp4.1LG08g01550 vs. TrEMBL
Match: A0A0A0L3N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-59
Identity = 123/182 (67.58%), Postives = 145/182 (79.67%), Query Frame = 1


Query: 5   SSPAASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLR 64
           SS    SLI  SP IQIK+MSE++L  TIQM N L G   IPDDC+T+ FYS I+  H+R
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 65  QLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALF 124
           QL  ERGR+TYLL VKP V+      N+YGFLHGGFVA  AE  SIACARTV+GEDK LF
Sbjct: 66  QLHRERGRLTYLLCVKPAVA------NVYGFLHGGFVATVAELVSIACARTVVGEDKKLF 125

Query: 125 LGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMP 184
           +GELSISYLSGAP+NAEV+V+ASVLRSG+SL+++ +EF+LQKTGKLVYTAR TLY+MPM 
Sbjct: 126 IGELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMA 181

Query: 185 KL 187
           KL
Sbjct: 186 KL 181

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BLAST of Cp4.1LG08g01550 vs. TrEMBL
Match: D7U7H7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.8e-34
Identity = 80/165 (48.48%), Postives = 108/165 (65.45%), Query Frame = 1


Query: 22  KNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKP 81
           + + E  L  T+     +     +P +C  + FYS + R  L+   +ERG +T L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 82  VVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAE 141
            V+      N YG LHGG VA   E  SIACARTV+ EDK LFLGELS+SYLS AP  AE
Sbjct: 78  AVA------NYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAE 137

Query: 142 VVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 187
           VV DASV+RSG+++T+I++EF+++KT KL+YT R+T Y+MP+ KL
Sbjct: 138 VVTDASVVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

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BLAST of Cp4.1LG08g01550 vs. TrEMBL
Match: G7LCQ0_MEDTR (Acyl-CoA thioesterase OS=Medicago truncatula GN=MTR_8g032450 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.5e-34
Identity = 80/185 (43.24%), Postives = 119/185 (64.32%), Query Frame = 1


Query: 2   AKPSSPAASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRS 61
           A  S+ A +S +  SP +  K++SE  L   +  +        +P++CNT+GF+    R+
Sbjct: 14  ASASAVAETSSVKISPEVDPKHVSETQLFVKLMGIGA-----PVPENCNTDGFFDSFLRN 73

Query: 62  HLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDK 121
            ++   ++RGRIT  ++ KP +       N YG LHGG V +  E  S ACARTV+ EDK
Sbjct: 74  FIKVDQIQRGRITCTVVAKPPIC------NAYGTLHGGAVGSLVEVLSTACARTVVAEDK 133

Query: 122 ALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSM 181
            LFLGE+SISYLSG P N EV  +ASV++SG++LT++++EF+L+KTG LVY   +T Y+M
Sbjct: 134 ELFLGEISISYLSGTPINEEVEANASVVKSGRNLTVVALEFKLKKTGNLVYLTHATFYNM 187

Query: 182 PMPKL 187
           P+ +L
Sbjct: 194 PVSRL 187

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BLAST of Cp4.1LG08g01550 vs. TrEMBL
Match: I3S8B6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-33
Identity = 81/186 (43.55%), Postives = 117/186 (62.90%), Query Frame = 1


Query: 2   AKPSSPAASSLILESPAIQIKN-MSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 61
           AKPSS   S+    SP+++I + +      ET+  +  + G V IP +CNT GFY    R
Sbjct: 3   AKPSSGTESASSCASPSLKISSELDPRHASETLTFVTRMGGGVSIPQNCNTNGFYDAFIR 62

Query: 62  SHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGED 121
           S ++   ++RGRI+  +I KP +       N YG LHGG V    E  S ACARTV+ ED
Sbjct: 63  SFIKVDHIQRGRISCTIIAKPPIC------NGYGTLHGGAVGVLVEVLSTACARTVVAED 122

Query: 122 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 181
           K L LGE+SISYLSG P N EV+ +ASV+++G++LT++++EF+ +K G L+Y   +T Y+
Sbjct: 123 KQLSLGEVSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHATFYN 182

Query: 182 MPMPKL 187
           MP+  L
Sbjct: 183 MPVSGL 182

[Close]

BLAST of Cp4.1LG08g01550 vs. TrEMBL
Match: A0A151TBD2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_018955 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.5e-33
Identity = 75/163 (46.01%), Postives = 108/163 (66.26%), Query Frame = 1


Query: 24  MSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKPVV 83
           M  +++  T   L  L  +  IP  C T GFYS    S +R   ++RGRI+  + VKP +
Sbjct: 1   MDPQNVSRTHTFLKSLGMYKPIPQSCETSGFYSHFFGSFIRVNDIKRGRISCTIAVKPSI 60

Query: 84  SVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAEVV 143
           S      N +G LHGG V +  E  SIACARTV+ EDK LFLGE+++SYLSGAP N EV+
Sbjct: 61  S------NYFGTLHGGSVGSLIELMSIACARTVVAEDKELFLGEMNVSYLSGAPTNTEVL 120

Query: 144 VDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 187
            +ASV++SG+++T++S+EF+L+ TG L+Y A +T Y++ + KL
Sbjct: 121 AEASVVKSGRNVTMVSLEFKLKNTGNLIYIAHTTFYNITVAKL 157

[Close]

BLAST of Cp4.1LG08g01550 vs. TAIR10
Match: AT3G61200.1 (AT3G61200.1 Thioesterase superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 3.8e-25
Identity = 55/132 (41.67%), Postives = 96/132 (72.73%), Query Frame = 1


Query: 55  YSDISRSHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACAR 114
           +S + +++ R LS+ RGR++  + V P +S      N +  LHGG VA+ AE  ++AC +
Sbjct: 63  FSVLFQNNTRALSIARGRVSCSVTVTPGIS------NFFKGLHGGAVASIAERVAMACVK 122

Query: 115 TVLGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTA 174
           TV+ EDK LF+GELS+SYLS AP ++E++V+ +V+R+G++L+++++EF++++T K+ Y +
Sbjct: 123 TVVSEDKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLS 182

Query: 175 RSTLYSMPMPKL 187
           R+T Y  P+ KL
Sbjct: 183 RATFYHSPISKL 188

[Close]

BLAST of Cp4.1LG08g01550 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 7.1e-08
Identity = 35/119 (29.41%), Postives = 57/119 (47.90%), Query Frame = 1


Query: 68  LERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGE 127
           +E GRI   + + P         N   FLHGG  A   +    A   T       + + E
Sbjct: 44  IEPGRIVCSMKIPP------HLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSV-E 103

Query: 128 LSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 187
           +++SYL  A  + E+ +++  LR GK++ ++S+E R + TGK++   R T Y  P   L
Sbjct: 104 INVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

[Close]

BLAST of Cp4.1LG08g01550 vs. NCBI nr
Match: gi|659075319|ref|XP_008438081.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 2.2e-67
Identity = 140/190 (73.68%), Postives = 159/190 (83.68%), Query Frame = 1


Query: 1   MAKPSSPAASS----LILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYS 60
           MAK SS ++SS    LI +SP IQIK +SEEDL ETIQM NGL G  QIPDDC+T+ FYS
Sbjct: 1   MAKSSSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYS 60

Query: 61  DISRSHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTV 120
            I+R HLRQL  ERGR+TYLL VKP VS      NIYG+LHGGFVAAAAEF SIACARTV
Sbjct: 61  HITRGHLRQLRRERGRLTYLLCVKPAVS------NIYGYLHGGFVAAAAEFLSIACARTV 120

Query: 121 LGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARS 180
           +GEDK LF+GELSISYLSGAP+NAEVVVDASVLRSG+SL+++ +EF+LQKTGKLVYTARS
Sbjct: 121 VGEDKKLFIGELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARS 180

Query: 181 TLYSMPMPKL 187
           TLY+MPM KL
Sbjct: 181 TLYNMPMAKL 184

[Close]

BLAST of Cp4.1LG08g01550 vs. NCBI nr
Match: gi|449432177|ref|XP_004133876.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 3.8e-59
Identity = 123/182 (67.58%), Postives = 145/182 (79.67%), Query Frame = 1


Query: 5   SSPAASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLR 64
           SS    SLI  SP IQIK+MSE++L  TIQM N L G   IPDDC+T+ FYS I+  H+R
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 65  QLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALF 124
           QL  ERGR+TYLL VKP V+      N+YGFLHGGFVA  AE  SIACARTV+GEDK LF
Sbjct: 66  QLHRERGRLTYLLCVKPAVA------NVYGFLHGGFVATVAELVSIACARTVVGEDKKLF 125

Query: 125 LGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMP 184
           +GELSISYLSGAP+NAEV+V+ASVLRSG+SL+++ +EF+LQKTGKLVYTAR TLY+MPM 
Sbjct: 126 IGELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMA 181

Query: 185 KL 187
           KL
Sbjct: 186 KL 181

[Close]

BLAST of Cp4.1LG08g01550 vs. NCBI nr
Match: gi|470142256|ref|XP_004306827.1| (PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca])

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 92/186 (49.46%), Postives = 125/186 (67.20%), Query Frame = 1


Query: 1   MAKPSSPAASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 60
           MAKPS     S    S A   +++ EE L+  ++ L  +     +PD CNTE FYS+I  
Sbjct: 1   MAKPSIALTESFA--SKATISEDIPEEYLNRLLKFLERVGISGDVPDHCNTEDFYSNIIG 60

Query: 61  SHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGED 120
             L+ L++ RGR+T L+ VKP V+      N +G  HGG +A+ AE  + A ART++ ED
Sbjct: 61  GFLKHLAILRGRVTCLVSVKPAVT------NTFGGFHGGAIASVAEAVAFATARTIVAED 120

Query: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180
           K LFLGELSISYLS AP+NAEV+VD SV+RSG+++T++  EF+L+KTG LVYTAR+T Y 
Sbjct: 121 KELFLGELSISYLSTAPKNAEVIVDGSVVRSGRNITVVEQEFKLKKTGNLVYTARATFYH 178

Query: 181 MPMPKL 187
           MP+ KL
Sbjct: 181 MPVSKL 178

[Close]

BLAST of Cp4.1LG08g01550 vs. NCBI nr
Match: gi|470142252|ref|XP_004306825.1| (PREDICTED: uncharacterized protein LOC101314599 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 159.5 bits (402), Expect = 5.8e-36
Identity = 92/192 (47.92%), Postives = 127/192 (66.15%), Query Frame = 1


Query: 1   MAKPSSPAASSLILESPAIQIKNMSEEDLHETIQML--NGLRGFVQIPDDCNTEGFYSDI 60
           MA PS+    S    S A   K++ E  +   +Q L  +G+ G   +PD CNT+ FYS +
Sbjct: 4   MANPSTIETESFA--STASISKDLPENHVKHLLQFLKLSGVSG--PLPDHCNTKDFYSYL 63

Query: 61  SRSHLRQLSLERGRITYLLIVKPVVS----VSVKFQNIYGFLHGGFVAAAAEFSSIACAR 120
               L+ L++ RGR+T L+ VKP  S    + +  QN +G  HGG +AA AE  + A AR
Sbjct: 64  VLGILKPLNIHRGRVTCLVSVKPAFSGMMFLFMNLQNFFGGFHGGAIAAVAEAVAFATAR 123

Query: 121 TVLGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTA 180
           TV+ EDK LFLGELSI+YLS AP+NAEV+ D SV+RSG++LT+I+ EF+L++TGKL+YTA
Sbjct: 124 TVVAEDKELFLGELSIAYLSSAPKNAEVIADGSVVRSGRNLTVIAQEFKLKETGKLIYTA 183

Query: 181 RSTLYSMPMPKL 187
           R+T Y  P+ KL
Sbjct: 184 RATFYHTPVSKL 191

[Close]

BLAST of Cp4.1LG08g01550 vs. NCBI nr
Match: gi|470142254|ref|XP_004306826.1| (PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-35
Identity = 91/188 (48.40%), Postives = 124/188 (65.96%), Query Frame = 1


Query: 1   MAKPSSPAASSLILESPAIQIKNMSEEDLHETIQML--NGLRGFVQIPDDCNTEGFYSDI 60
           MA PS+    S    S A   K++ E  +   +Q L  +G+ G   +PD CNT+ FYS +
Sbjct: 4   MANPSTIETESFA--STASISKDLPENHVKHLLQFLKLSGVSG--PLPDHCNTKDFYSYL 63

Query: 61  SRSHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLG 120
               L+ L++ RGR+T L+ VKP       F N +G  HGG +AA AE  + A ARTV+ 
Sbjct: 64  VLGILKPLNIHRGRVTCLVSVKPA------FSNFFGGFHGGAIAAVAEAVAFATARTVVA 123

Query: 121 EDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTL 180
           EDK LFLGELSI+YLS AP+NAEV+ D SV+RSG++LT+I+ EF+L++TGKL+YTAR+T 
Sbjct: 124 EDKELFLGELSIAYLSSAPKNAEVIADGSVVRSGRNLTVIAQEFKLKETGKLIYTARATF 181

Query: 181 YSMPMPKL 187
           Y  P+ KL
Sbjct: 184 YHTPVSKL 181

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g01550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g01550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3N5_CUCSA	2.6e-59	67.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1	[more]
D7U7H7_VITVI	3.8e-34	48.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=...	[more]
G7LCQ0_MEDTR	8.5e-34	43.24	Acyl-CoA thioesterase OS=Medicago truncatula GN=MTR_8g032450 PE=2 SV=1	[more]
I3S8B6_LOTJA	3.2e-33	43.55	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A151TBD2_CAJCA	5.5e-33	46.01	Uncharacterized protein OS=Cajanus cajan GN=KK1_018955 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g01550 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61200.1	3.8e-25	41.67	Thioesterase superfamily protein	[more]
AT1G04290.1	7.1e-08	29.41	Thioesterase superfamily protein	[more]

BLAST of Cp4.1LG08g01550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075319\|ref\|XP_008438081.1\|	2.2e-67	73.68	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]	[more]
gi\|449432177\|ref\|XP_004133876.1\|	3.8e-59	67.58	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus]	[more]
gi\|470142256\|ref\|XP_004306827.1\|	1.4e-37	49.46	PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca]	[more]
gi\|470142252\|ref\|XP_004306825.1\|	5.8e-36	47.92	PREDICTED: uncharacterized protein LOC101314599 isoform X1 [Fragaria vesca subsp...	[more]
gi\|470142254\|ref\|XP_004306826.1\|	1.7e-35	48.40	PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006683	Thioestr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0047617	acyl-CoA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g01550.1	Cp4.1LG08g01550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 93..169 score: 1.3
None	No IPR available	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 8..186 score: 1.4
None	No IPR available	PANTHER	PTHR21660:SF12	SUBFAMILY NOT NAMED	coord: 8..186 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g01550	Cucsa.258150	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g01550	CmaCh14G020180	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g01550	CmaCh06G010980	Cucurbita maxima (Rimu)	cmacpeB854
Cp4.1LG08g01550	CmoCh06G011250	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g01550	CmoCh14G020780	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g01550	Cla021255	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g01550	Csa3G122640	Cucumber (Chinese Long) v2	cpecuB859
Cp4.1LG08g01550	MELO3C006135	Melon (DHL92) v3.5.1	cpemeB813
Cp4.1LG08g01550	ClCG05G001750	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g01550	CSPI03G09020	Wild cucumber (PI 183967)	cpecpiB861
Cp4.1LG08g01550	Lsi05G020160	Bottle gourd (USVL1VR-Ls)	cpelsiB714
Cp4.1LG08g01550	MELO3C006135.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g01550	CsaV3_3G009140	Cucumber (Chinese Long) v3	cpecucB1056
Cp4.1LG08g01550	Bhi01G000280	Wax gourd	cpewgoB1113
Cp4.1LG08g01550	CsGy3G009090	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g01550	Carg24951	Silver-seed gourd	carcpeB0923
Cp4.1LG08g01550	Carg14795	Silver-seed gourd	carcpeB0885

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g01550	Cp4.1LG03g16780	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g01550	Wax gourd	cpewgoB1106