CmoCh06G011250 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G011250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Thioesterase family protein
Location	Cmo_Chr06 : 8661054 .. 8663729 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGAAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACAAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAATCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTAAGTTCTCAATTCTTTTTTCAAGTTTGTTTTCTCGTCGACTTTAGGAAGAGAAATTTGGTATTCGGTTTATACTATTGCGTATTCCTTGTGTCTGATTTGAATCGAATTGATATCTTTGGGGACTTGAAAAATTAGCTATTCATCATTAGAGCGGGAATAGCTCAGAAAATGAAGTGTTTGGTTAGAATCGAACCAATATTTTTGAGAACTTGAAAGTTCACTATTCATCTATCGTTATAGTGATGTCTTTGGTTGCTGAGAAAATGCGGTATCTGATTTGAATTGAAATGATACACTTGGAAACTTTCAAATTTTCTGTTCATCATTATACTGATCTGTTTACTTGCCGTGAAACTGTGGTGATTGATTTGAATCGGAACAGCTTCCACAGGAACTTGAAAACAAAGCATTCATCATCATAGTGGTCTATTTGTTTGCTGAGAATATGTGCCTTTTCAAATTCTCGTTATTTGCGTATTTCAGTTTGAGTTCGTGTGGATTCATCTATCTGATGAATTAAAAACGGAATATCAATATGTTTGCATTCACATTAACAACAGGTATCTATGAAATTTCAGAATATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGTGAGTAAATTTCAAGTAATTGCTGTGCTCCCTTATGATTTGTTTGAGTTGGGGGTGCAAATAGGTTAGTTAAGCTGAGGAAACTGACTATCGAATTGACCAAAACTGAGTCCAACCAATCAAAGCCATCAAAACTAACCAAAATTGAAATAAGCCATAGCCAACAAAGTCAAATGGATCACGAATGAGAATTCAGATTGAATTAATTGAATTGGTTAATTCAGCCGGTTTTGGCAATTTCGGTTTCGGGAGCTGGGACGTGTTTTGATGGAAACTGGATGTATAAATTTCTTAGACGTTAGAGTCCTCAGATTGTTTTGCTGGTCCTGCATGCTTAAACCTTTTGTGTACTTAGCCATACATGGGTGGGAGGGTTGCATGATTCTACCGGTGGCAATGGTTTATAACTTGAGACGGGACCATTTTATCTTCTTATGATTTGAAACTGATATTATCATGGTGTCTTTTTTATCGAATGGTATATTTCCATGGCTTTGCTGACTTTAGCTCACCTCCAGCCACCTTGCGCTTGTAGTTTATGGGAAAATACCATTCATTTTCTTTATTAGGAGGATTAAGTGGAGGTACATCCATTCAAATCATGAATTTTCAAATTGAGAGATCAAGAATTAAATCATAATTACCACCCTCTGCAATCCTATAGGTATAACATCAGTAATATGATTGCCACCACACTTCAGATCAGAGCAACAAATGGGACTGAGTTAGGTTGGATGTTTTAGGACACAAACATAGTAGTTTGGTACCATGTGAACAAGAAGGGTCTGAGTACATAACACAAATATAAATATAACTAGGTGCTATGACCAAGCCTTGAGTACATCAATGATTGCATCTAGCGTTCGATTCAGACTTCGGTACCGATCAACTTATGGAGGATATGAAAGATGGTATTTCGATCGCATTTTGTTATTCAAAGATTGGTTTCGGCAATCACATCCAGGAAAGTATGAACACACAAGAAAAAACCATCGATACAATACAATGTGAAATTTGGTATTTGAGTCATACTTGTGAATTTAAATGCAGTTTTGATTGTTCAAGTAGCTTGCTTATGATTAAGAATCTTAGTTTTACATATTTTCACTCAATTTGAGCTTTACCAAGATCATGCTATCTTCCACGACCTTACTTAAACAGGACCTGTTCTTTAGAAGTTTTCTGAAAAATTGTGTTGTTTGCAGGCAGAGGTTGTGGTAGATGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTCTGTGTTTTTATTCCGTTTGAACAAACATGACAAATATATGTACTTGTGTAACGTTGAAAAGAGTAGGCAAATATATTGATTAGAAGCTTGATTATCCTTGTATACTATTTATAATCTAGACAAAATACTGTTGTTCCATGCTATATTTATAAATTACATCAAATAGATGCAATCTTAGTTGGTATAGAGTTTGGACTTCAAGATACTCTATTTCTTTTTAGTTCAACCTTTTGAGGCGAG

mRNA sequence

TCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGAAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACAAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAATCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCAATATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGATGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTCTGTGTTTTTATTCCGTTTGAACAAACATGACAAATATATGTACTTGTGTAACGTTGAAAAGAGTAGGCAAATATATTGATTAGAAGCTTGATTATCCTTGTATACTATTTATAATCTAGACAAAATACTGTTGTTCCATGCTATATTTATAAATTACATCAAATAGATGCAATCTTAGTTGGTATAGAGTTTGGACTTCAAGATACTCTATTTCTTTTTAGTTCAACCTTTTGAGGCGAG

Coding sequence (CDS)

ATGGCGAAACCTTCTTCACCAGAAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACAAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAATCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCAATATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGATGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAA

Homology

[Close]

BLAST of CmoCh06G011250 vs. TrEMBL
Match: A0A0A0L3N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-61
Identity = 123/176 (69.89%), Postives = 145/176 (82.39%), Query Frame = 1


Query: 5   SSPEASSLILESPAIQIKNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRNHLR 64
           SS    SLI  SP IQIK+MSE++L  TIQM N L G   IPDDC+T+ FYS I+  H+R
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 65  QLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSI 124
           QL  ERGR+TYLL VKP V+N+YGFLHGGFVA  AE  SIACARTV+GEDK LF+GELSI
Sbjct: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125

Query: 125 SYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           SYLSGAP+NAEV+V+ASVLRSG+SL+++ +EF+LQKTGKLVYTAR TLY+MPM KL
Sbjct: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]

BLAST of CmoCh06G011250 vs. TrEMBL
Match: D7U7H7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 80/159 (50.31%), Postives = 109/159 (68.55%), Query Frame = 1


Query: 22  KNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRNHLRQLSLERGRITYLLIVKP 81
           + + E  L +T+     +     +P +C  + FYS + R  L+   +ERG +T L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 82  VVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAEVVVDAS 141
            V+N YG LHGG VA   E  SIACARTV+ EDK LFLGELS+SYLS AP  AEVV DAS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 142 VLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           V+RSG+++T+I++EF+++KT KL+YT R+T Y+MP+ KL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

[Close]

BLAST of CmoCh06G011250 vs. TrEMBL
Match: G7LCQ0_MEDTR (Acyl-CoA thioesterase OS=Medicago truncatula GN=MTR_8g032450 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-36
Identity = 80/179 (44.69%), Postives = 118/179 (65.92%), Query Frame = 1


Query: 2   AKPSSPEASSLILESPAIQIKNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRN 61
           A  S+   +S +  SP +  K++SE  L   +  +        +P++CNT+GF+    RN
Sbjct: 14  ASASAVAETSSVKISPEVDPKHVSETQLFVKLMGIGA-----PVPENCNTDGFFDSFLRN 73

Query: 62  HLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGE 121
            ++   ++RGRIT  ++ KP + N YG LHGG V +  E  S ACARTV+ EDK LFLGE
Sbjct: 74  FIKVDQIQRGRITCTVVAKPPICNAYGTLHGGAVGSLVEVLSTACARTVVAEDKELFLGE 133

Query: 122 LSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           +SISYLSG P N EV  +ASV++SG++LT++++EF+L+KTG LVY   +T Y+MP+ +L
Sbjct: 134 ISISYLSGTPINEEVEANASVVKSGRNLTVVALEFKLKKTGNLVYLTHATFYNMPVSRL 187

[Close]

BLAST of CmoCh06G011250 vs. TrEMBL
Match: B9RDM2_RICCO (Acyl-CoA thioesterase, putative OS=Ricinus communis GN=RCOM_1614440 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-35
Identity = 78/136 (57.35%), Postives = 107/136 (78.68%), Query Frame = 1


Query: 45  IPDDCNTEGFYSDISRNHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSI 104
           IP +  +E FYS+I  N L+   ++RGRI+    V P V+N +G LHGG +AA AE  +I
Sbjct: 45  IPKNKQSEDFYSNILSNLLKADHVQRGRISCSFSVLPFVANYFGGLHGGALAAIAERVAI 104

Query: 105 ACARTVLGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKL 164
           ACARTV+ EDK +FLGELS+SYLS AP+N E+VVD+SVLRSGK+LT++++EF+++KTGKL
Sbjct: 105 ACARTVVAEDKEIFLGELSLSYLSAAPKNEELVVDSSVLRSGKNLTVVAMEFKIKKTGKL 164

Query: 165 VYTARSTLYSMPMPKL 181
            +TAR+T Y+MP+ KL
Sbjct: 165 AFTARATFYNMPVAKL 180

[Close]

BLAST of CmoCh06G011250 vs. TrEMBL
Match: A0A151TBD2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_018955 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-35
Identity = 74/157 (47.13%), Postives = 109/157 (69.43%), Query Frame = 1


Query: 24  MSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRNHLRQLSLERGRITYLLIVKPVV 83
           M  +++ +T   L  L  +  IP  C T GFYS    + +R   ++RGRI+  + VKP +
Sbjct: 1   MDPQNVSRTHTFLKSLGMYKPIPQSCETSGFYSHFFGSFIRVNDIKRGRISCTIAVKPSI 60

Query: 84  SNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAEVVVDASVL 143
           SN +G LHGG V +  E  SIACARTV+ EDK LFLGE+++SYLSGAP N EV+ +ASV+
Sbjct: 61  SNYFGTLHGGSVGSLIELMSIACARTVVAEDKELFLGEMNVSYLSGAPTNTEVLAEASVV 120

Query: 144 RSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           +SG+++T++S+EF+L+ TG L+Y A +T Y++ + KL
Sbjct: 121 KSGRNVTMVSLEFKLKNTGNLIYIAHTTFYNITVAKL 157

[Close]

BLAST of CmoCh06G011250 vs. TAIR10
Match: AT3G61200.1 (AT3G61200.1 Thioesterase superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 4.6e-28
Identity = 56/126 (44.44%), Postives = 96/126 (76.19%), Query Frame = 1


Query: 55  YSDISRNHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGED 114
           +S + +N+ R LS+ RGR++  + V P +SN +  LHGG VA+ AE  ++AC +TV+ ED
Sbjct: 63  FSVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSED 122

Query: 115 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 174
           K LF+GELS+SYLS AP ++E++V+ +V+R+G++L+++++EF++++T K+ Y +R+T Y 
Sbjct: 123 KHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYH 182

Query: 175 MPMPKL 181
            P+ KL
Sbjct: 183 SPISKL 188

[Close]

BLAST of CmoCh06G011250 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.3e-10
Identity = 37/120 (30.83%), Postives = 61/120 (50.83%), Query Frame = 1


Query: 61  NHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLG 120
           N L+   +E GRI   + + P + N   FLHGG  A   +    A   T       + + 
Sbjct: 37  NGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSV- 96

Query: 121 ELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 180
           E+++SYL  A  + E+ +++  LR GK++ ++S+E R + TGK++   R T Y  P   L
Sbjct: 97  EINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

[Close]

BLAST of CmoCh06G011250 vs. NCBI nr
Match: gi|659075319|ref|XP_008438081.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 3.0e-69
Identity = 136/176 (77.27%), Postives = 154/176 (87.50%), Query Frame = 1


Query: 5   SSPEASSLILESPAIQIKNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRNHLR 64
           SS E  SLI +SP IQIK +SEEDL +TIQM NGL G  QIPDDC+T+ FYS I+R HLR
Sbjct: 9   SSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHITRGHLR 68

Query: 65  QLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSI 124
           QL  ERGR+TYLL VKP VSNIYG+LHGGFVAAAAEF SIACARTV+GEDK LF+GELSI
Sbjct: 69  QLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFIGELSI 128

Query: 125 SYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           SYLSGAP+NAEVVVDASVLRSG+SL+++ +EF+LQKTGKLVYTARSTLY+MPM KL
Sbjct: 129 SYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAKL 184

[Close]

BLAST of CmoCh06G011250 vs. NCBI nr
Match: gi|449432177|ref|XP_004133876.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-61
Identity = 123/176 (69.89%), Postives = 145/176 (82.39%), Query Frame = 1


Query: 5   SSPEASSLILESPAIQIKNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRNHLR 64
           SS    SLI  SP IQIK+MSE++L  TIQM N L G   IPDDC+T+ FYS I+  H+R
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 65  QLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSI 124
           QL  ERGR+TYLL VKP V+N+YGFLHGGFVA  AE  SIACARTV+GEDK LF+GELSI
Sbjct: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125

Query: 125 SYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           SYLSGAP+NAEV+V+ASVLRSG+SL+++ +EF+LQKTGKLVYTAR TLY+MPM KL
Sbjct: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]

BLAST of CmoCh06G011250 vs. NCBI nr
Match: gi|470142256|ref|XP_004306827.1| (PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca])

HSP 1 Score: 172.6 bits (436), Expect = 6.4e-40
Identity = 92/180 (51.11%), Postives = 126/180 (70.00%), Query Frame = 1


Query: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISR 60
           MAKPS     S    S A   +++ EE L++ ++ L  +     +PD CNTE FYS+I  
Sbjct: 1   MAKPSIALTESFA--SKATISEDIPEEYLNRLLKFLERVGISGDVPDHCNTEDFYSNIIG 60

Query: 61  NHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLG 120
             L+ L++ RGR+T L+ VKP V+N +G  HGG +A+ AE  + A ART++ EDK LFLG
Sbjct: 61  GFLKHLAILRGRVTCLVSVKPAVTNTFGGFHGGAIASVAEAVAFATARTIVAEDKELFLG 120

Query: 121 ELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 180
           ELSISYLS AP+NAEV+VD SV+RSG+++T++  EF+L+KTG LVYTAR+T Y MP+ KL
Sbjct: 121 ELSISYLSTAPKNAEVIVDGSVVRSGRNITVVEQEFKLKKTGNLVYTARATFYHMPVSKL 178

[Close]

BLAST of CmoCh06G011250 vs. NCBI nr
Match: gi|470142254|ref|XP_004306826.1| (PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 166.0 bits (419), Expect = 6.0e-38
Identity = 92/182 (50.55%), Postives = 125/182 (68.68%), Query Frame = 1


Query: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHKTIQML--NGLRGFVQIPDDCNTEGFYSDI 60
           MA PS+ E  S    S A   K++ E  +   +Q L  +G+ G   +PD CNT+ FYS +
Sbjct: 4   MANPSTIETESFA--STASISKDLPENHVKHLLQFLKLSGVSG--PLPDHCNTKDFYSYL 63

Query: 61  SRNHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALF 120
               L+ L++ RGR+T L+ VKP  SN +G  HGG +AA AE  + A ARTV+ EDK LF
Sbjct: 64  VLGILKPLNIHRGRVTCLVSVKPAFSNFFGGFHGGAIAAVAEAVAFATARTVVAEDKELF 123

Query: 121 LGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMP 180
           LGELSI+YLS AP+NAEV+ D SV+RSG++LT+I+ EF+L++TGKL+YTAR+T Y  P+ 
Sbjct: 124 LGELSIAYLSSAPKNAEVIADGSVVRSGRNLTVIAQEFKLKETGKLIYTARATFYHTPVS 181

[Close]

BLAST of CmoCh06G011250 vs. NCBI nr
Match: gi|225453706|ref|XP_002270993.1| (PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera])

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-36
Identity = 80/159 (50.31%), Postives = 109/159 (68.55%), Query Frame = 1


Query: 22  KNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISRNHLRQLSLERGRITYLLIVKP 81
           + + E  L +T+     +     +P +C  + FYS + R  L+   +ERG +T L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 82  VVSNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAEVVVDAS 141
            V+N YG LHGG VA   E  SIACARTV+ EDK LFLGELS+SYLS AP  AEVV DAS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 142 VLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           V+RSG+++T+I++EF+++KT KL+YT R+T Y+MP+ KL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

The following BLAST results are available for this feature:

BLAST of CmoCh06G011250 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G011250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3N5_CUCSA	1.2e-61	69.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1	[more]
D7U7H7_VITVI	1.4e-36	50.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=...	[more]
G7LCQ0_MEDTR	3.9e-36	44.69	Acyl-CoA thioesterase OS=Medicago truncatula GN=MTR_8g032450 PE=2 SV=1	[more]
B9RDM2_RICCO	3.3e-35	57.35	Acyl-CoA thioesterase, putative OS=Ricinus communis GN=RCOM_1614440 PE=4 SV=1	[more]
A0A151TBD2_CAJCA	3.3e-35	47.13	Uncharacterized protein OS=Cajanus cajan GN=KK1_018955 PE=4 SV=1	[more]

BLAST of CmoCh06G011250 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61200.1	4.6e-28	44.44	Thioesterase superfamily protein	[more]
AT1G04290.1	3.3e-10	30.83	Thioesterase superfamily protein	[more]

BLAST of CmoCh06G011250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075319\|ref\|XP_008438081.1\|	3.0e-69	77.27	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]	[more]
gi\|449432177\|ref\|XP_004133876.1\|	1.7e-61	69.89	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus]	[more]
gi\|470142256\|ref\|XP_004306827.1\|	6.4e-40	51.11	PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca]	[more]
gi\|470142254\|ref\|XP_004306826.1\|	6.0e-38	50.55	PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp...	[more]
gi\|225453706\|ref\|XP_002270993.1\|	1.9e-36	50.31	PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006683	Thioestr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0047617	acyl-CoA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G011250.1	CmoCh06G011250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 87..163 score: 1.2
None	No IPR available	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 4..180 score: 3.9
None	No IPR available	PANTHER	PTHR21660:SF12	SUBFAMILY NOT NAMED	coord: 4..180 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G011250	Cucsa.258150	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G011250	CmaCh14G020180	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G011250	CmaCh06G010980	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G011250	Cla021255	Watermelon (97103) v1	cmowmB793
CmoCh06G011250	Csa3G122640	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G011250	MELO3C006135	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G011250	ClCG05G001750	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G011250	CSPI03G09020	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G011250	Lsi05G020160	Bottle gourd (USVL1VR-Ls)	cmolsiB757
CmoCh06G011250	Cp4.1LG03g16780	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G011250	Cp4.1LG08g01550	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G011250	MELO3C006135.2	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G011250	CsaV3_3G009140	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G011250	Cla97C05G082180	Watermelon (97103) v2	cmowmbB833
CmoCh06G011250	Bhi01G000280	Wax gourd	cmowgoB1008
CmoCh06G011250	CsGy3G009090	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G011250	Carg24951	Silver-seed gourd	carcmoB0892
CmoCh06G011250	Carg14795	Silver-seed gourd	carcmoB0852

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G011250	CmoCh14G020780	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:

None