Cp4.1LG03g16780 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g16780
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAcyl-CoA thioesterase, putative
LocationCp4.1LG03 : 13012618 .. 13014882 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAAGCACTAAAATTGACTGAAATTGAGCGGCGAAGTAGGAGGTTGAGAGGAGCGACAATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCAGAAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCGTTAATCTTTGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGAACTATAGAATTGCTCAATGGATTGGGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCCGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCGTAATTTCTTAATTCTCCATCCAGATTTGTTTTCTCATCGAATTTAGGAGAAATTTGGTATGCGGTTTCTAATACTGTGTGTTCCTTGTGTTGCGTCTGATTTGAATCGAAACAATGTGTTGCGCAACTTGAAAATACGGTGTTTGATTTGAATCGAAGCAATATCTTTGAGTTCTTGAAAATTCATGCTGAGAAAATTTTGTGCCTGATTTGAATCGAAACAGTATCTATTGGATCTTGAAAACTTAGTATTGGTATGTTTGAGTTTGATTGCTGAGATTTTTCAAATTCTCTTCATCTGCTACTATCAGCTTTCGGTCATGTGGATTCATCTGTTATATGAAATAAAAAATGAACATCAATATTGTTTACATTCACATTAAACAGAGATATCTATTGTATAATTTCAGAATCGTTATGGCTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGTGAGTAAAATTTAAGTTACTGTTGTGCTTCCTCCTGATTATTTGAGTAGGTTAGATAAGTTGACAGAATTGTCTACCGAATTGACCAAAACTGAGTCGAACCATAATTGAAATAAGCTAGTTGAACCAACAAAATCCGACGAACGAATCATCAAGAATGACACTTCAAATTGAATGAACTGAATTGGTTAATTCAGCTGGTTTTCTTGGGGTTTTTTTTTTCAGTTTTGAAAGCTGGGAAGTTCATAATAGAAATTGAATGTTGAGATTTGTCAGTTGATAGAGCCCTGAGAAATTGAGAATGTTTTTCCTGGACCAGCAAACTTTTGTGTAGCCATGCATGGGCTGGATGGAGGGTTGCATAAATTGGGATGGGACCACTTTATCTTCTTATGATTTGAAACTCATCCTACCATTGTGCTTATTCATTATTGGTTGGGGTATCTTCATGGCTCACTTCCAACAATCTTCCCCTTAATAGTTACTAATAAGTTTTCGGTGAGGATTAAATGGAAATACGCTCATCTAGATCCTGAGTTTCTAATTGAGAGTGTCCTGAGTTTTTTAATTGAGAGATTAAGAATTAAACGATAATTGTCAAACTTTATAATATTTTTGATGTCAACGTCAAAACTAGAACCCACAAATGGGACCGAGTTCGCTTGGGTGTTCTAGGCTACAAACACAGTAGTTTATATGATGTGAATAAAAAGGGTCTTTGCATATAACATAGAAAATTGTATGACCGAACTAATTAGGATATGTTTTGAATTACTTTCTAAGTTCTTAAAATAGTGTTTTTAAACACTTGGAAAGTCAATCCAAACAAATTGTTATAAGAAAAGGTGAGCATATGTTTTATAATCCCATGCACGATACACTATGAAATTTGGTATGATGATATATCCAAACTTGGCATACATTTTTACTCAATTATTTGTCCCGGCCTCGATACTTTAGCAAGATGCGTTATTTATTAAAAAAAAAACCGTTCTTGCAGGCCGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAAATATCTCCAACAATCTCAAGTTTTTATTCAGGTTGAATAATCGTGTCAAATGTATTTACTATTGTAATGTTGGAAAGAGTAGGGAAATGTATGGATTAGATGCTTGATTATTGTCCTTGTACATTTATATACAATTTAAGTACATGAATGGCTCCGAGGGTTCAAT

mRNA sequence

TGTAAGCACTAAAATTGACTGAAATTGAGCGGCGAAGTAGGAGGTTGAGAGGAGCGACAATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCAGAAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCGTTAATCTTTGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGAACTATAGAATTGCTCAATGGATTGGGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCCGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCAATCGTTATGGCTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGCCGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAAATATCTCCAACAATCTCAAGTTTTTATTCAGGTTGAATAATCGTGTCAAATGTATTTACTATTGTAATGTTGGAAAGAGTAGGGAAATGTATGGATTAGATGCTTGATTATTGTCCTTGTACATTTATATACAATTTAAGTACATGAATGGCTCCGAGGGTTCAAT

Coding sequence (CDS)

ATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCAGAAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCGTTAATCTTTGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGAACTATAGAATTGCTCAATGGATTGGGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCCGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCAATCGTTATGGCTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGCCGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAA

Protein sequence

MAKPSSSATPSSSETPSSETPSSSETPSSSETPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL
Homology
[Close]
BLAST of Cp4.1LG03g16780 vs. TrEMBL
Match: A0A0A0L3N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.2e-66
Identity = 131/180 (72.78%), Postives = 152/180 (84.44%), Query Frame = 1 

Query: 30  SETPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIR 89
           + + SSS  PSLIF SPTIQIKDMSE++L GTI++ N L GSG IPDDC+TK FYS I  
Sbjct: 2   ANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITN 61

Query: 90  GHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLG 149
           GH+RQ   ERGRLTYLL VKPAV+N YGFLHGGFVA  AE  SIACARTV+ EDK+LF+G
Sbjct: 62  GHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIG 121

Query: 150 ELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 209
           ELSISYLSGAP NAEVI++AS+LRSG+ L+VV ++F+LQKTGKL+YTAR TLYNMPMAKL
Sbjct: 122 ELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]
BLAST of Cp4.1LG03g16780 vs. TrEMBL
Match: D7U7H7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42
Identity = 89/159 (55.97%), Postives = 117/159 (73.58%), Query Frame = 1 

Query: 51  KDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRGHLRQRRLERGRLTYLLSVKP 110
           + + E  L  T+     +G +  +P +C  K FYS +IRG L+ +R+ERG LT L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 111 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 170
           AV+N YG LHGG VA   E  SIACARTV+AEDKELFLGELS+SYLS AP  AEV+ DAS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 171 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 210
           ++RSG+++ V+A++F+++KT KLIYT R+T YNMP+AKL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

[Close]
BLAST of Cp4.1LG03g16780 vs. TrEMBL
Match: V4TXQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022587mg PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-40
Identity = 84/159 (52.83%), Postives = 118/159 (74.21%), Query Frame = 1 

Query: 51  KDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRGHLRQRRLERGRLTYLLSVKP 110
           K++  ED+   I  L  +G S  IPDDC T   YS+I+  H++  +++RGRL   LSVKP
Sbjct: 8   KEVDPEDVSKVIVFLKEVGASSSIPDDCCTNDSYSNILGRHIKVHKIQRGRLICHLSVKP 67

Query: 111 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 170
           A+ N +  +HGG +AA +E  +IACARTV+AEDKE+FLGEL ISYLS APRNAE+I++AS
Sbjct: 68  AILNFFDGIHGGAIAAFSERMAIACARTVVAEDKEIFLGELGISYLSAAPRNAELIMEAS 127

Query: 171 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 210
           ++RSG+++ VVA++F+   TGKL+  +R+T YN P+AKL
Sbjct: 128 VVRSGRNVTVVAVEFKFNDTGKLVCASRATFYNTPIAKL 166

[Close]
BLAST of Cp4.1LG03g16780 vs. TrEMBL
Match: A0A067H2E8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031046mg PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-40
Identity = 83/159 (52.20%), Postives = 117/159 (73.58%), Query Frame = 1 

Query: 51  KDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRGHLRQRRLERGRLTYLLSVKP 110
           K++  ED+   I  L  +G S  IPDDC T   YS+I+  H++  +++RGRL   LSVKP
Sbjct: 8   KEVDPEDVSKVIVFLKEVGASSSIPDDCCTNDSYSNILGRHIKVHKIQRGRLICHLSVKP 67

Query: 111 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 170
           A+ N +G +HGG +AA +E  +IACARTV+AEDKE+FLGEL ISYLS AP NAE+I++AS
Sbjct: 68  AILNFFGGIHGGAIAAFSERMAIACARTVVAEDKEIFLGELGISYLSAAPHNAELIMEAS 127

Query: 171 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 210
           ++RSG+++ VVA++F+   TGKL+  + +T YN P+AKL
Sbjct: 128 VVRSGRNVTVVAVEFKFNDTGKLVCASHATFYNTPIAKL 166

[Close]
BLAST of Cp4.1LG03g16780 vs. TrEMBL
Match: M5X5K0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019925mg PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.4e-39
Identity = 86/143 (60.14%), Postives = 112/143 (78.32%), Query Frame = 1 

Query: 68  LGGSGQIPDDCNTK-GFYSDIIRGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAA 127
           +G SG +PD  + K   YSD++R  L    + RG +T L+SVKPAV N +   HGG VAA
Sbjct: 1   VGVSGHVPDQFDAKKDSYSDLVRDLLEPLHISRGHVTCLVSVKPAVINFFAGFHGGAVAA 60

Query: 128 AAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFR 187
            AE  SIACARTVMA+DKE+FLGELSISYL+ A +NAEVI+DAS++RSG++L+V+A++F+
Sbjct: 61  VAEAVSIACARTVMAKDKEIFLGELSISYLASAKKNAEVIVDASVVRSGRNLSVIALEFK 120

Query: 188 LQKTGKLIYTARSTLYNMPMAKL 210
           L+KTG LIYTAR+T Y+MP AKL
Sbjct: 121 LKKTGDLIYTARATFYHMPAAKL 143

[Close]
BLAST of Cp4.1LG03g16780 vs. TAIR10
Match: AT3G61200.1 (AT3G61200.1 Thioesterase superfamily protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-24
Identity = 66/196 (33.67%), Postives = 120/196 (61.22%), Query Frame = 1 

Query: 14  ETPSSETPSSSETPSSSETPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQ 73
           ET S E    S TP SS+T   +A   +I  +  + + D  +                 +
Sbjct: 8   ETGSPEDTDMSSTPISSDT---TAVSKVIDPNYVLMVADFFKAI------------SPDE 67

Query: 74  IPDDCNTKGFYSDIIRGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSI 133
             +D  +   +S + + + R   + RGR++  ++V P +SN +  LHGG VA+ AE  ++
Sbjct: 68  SCNDFTSFDSFSVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAM 127

Query: 134 ACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKL 193
           AC +TV++EDK LF+GELS+SYLS AP ++E++++ +++R+G++L+VV ++F++++T K+
Sbjct: 128 ACVKTVVSEDKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKV 187

Query: 194 IYTARSTLYNMPMAKL 210
            Y +R+T Y+ P++KL
Sbjct: 188 TYLSRATFYHSPISKL 188

[Close]
BLAST of Cp4.1LG03g16780 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 39/127 (30.71%), Postives = 63/127 (49.61%), Query Frame = 1 

Query: 83  FYSDIIRGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAE 142
           F    +   L+   +E GR+   + + P + N   FLHGG  A   +    A   T  A 
Sbjct: 30  FLERFVTNGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGAS 89

Query: 143 DKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLY 202
              + + E+++SYL  A  + E+ I++  LR GK + VV+++ R + TGK+I   R T Y
Sbjct: 90  HSGVSV-EINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKY 149

Query: 203 NMPMAKL 210
             P + L
Sbjct: 150 FAPRSNL 155

[Close]
BLAST of Cp4.1LG03g16780 vs. NCBI nr
Match: gi|659075319|ref|XP_008438081.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 1.5e-72
Identity = 142/181 (78.45%), Postives = 160/181 (88.40%), Query Frame = 1 

Query: 29  SSETPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDII 88
           SS + SSS  PSLIF SPTIQIK +SEEDLR TI++ NGL GSGQIPDDC+TK FYS I 
Sbjct: 4   SSSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHIT 63

Query: 89  RGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFL 148
           RGHLRQ R ERGRLTYLL VKPAVSN YG+LHGGFVAAAAEF SIACARTV+ EDK+LF+
Sbjct: 64  RGHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFI 123

Query: 149 GELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAK 208
           GELSISYLSGAP NAEV++DAS+LRSG+ L+VV ++F+LQKTGKL+YTARSTLYNMPMAK
Sbjct: 124 GELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAK 183

Query: 209 L 210
           L
Sbjct: 184 L 184

[Close]
BLAST of Cp4.1LG03g16780 vs. NCBI nr
Match: gi|449432177|ref|XP_004133876.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 4.7e-66
Identity = 131/180 (72.78%), Postives = 152/180 (84.44%), Query Frame = 1 

Query: 30  SETPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIR 89
           + + SSS  PSLIF SPTIQIKDMSE++L GTI++ N L GSG IPDDC+TK FYS I  
Sbjct: 2   ANSSSSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITN 61

Query: 90  GHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLG 149
           GH+RQ   ERGRLTYLL VKPAV+N YGFLHGGFVA  AE  SIACARTV+ EDK+LF+G
Sbjct: 62  GHVRQLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIG 121

Query: 150 ELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 209
           ELSISYLSGAP NAEVI++AS+LRSG+ L+VV ++F+LQKTGKL+YTAR TLYNMPMAKL
Sbjct: 122 ELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]
BLAST of Cp4.1LG03g16780 vs. NCBI nr
Match: gi|470142256|ref|XP_004306827.1| (PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca])

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43
Identity = 96/177 (54.24%), Postives = 131/177 (74.01%), Query Frame = 1 

Query: 33  PSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRGHL 92
           PS + T S  F S     +D+ EE L   ++ L  +G SG +PD CNT+ FYS+II G L
Sbjct: 4   PSIALTES--FASKATISEDIPEEYLNRLLKFLERVGISGDVPDHCNTEDFYSNIIGGFL 63

Query: 93  RQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELS 152
           +   + RGR+T L+SVKPAV+N +G  HGG +A+ AE  + A ART++AEDKELFLGELS
Sbjct: 64  KHLAILRGRVTCLVSVKPAVTNTFGGFHGGAIASVAEAVAFATARTIVAEDKELFLGELS 123

Query: 153 ISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 210
           ISYLS AP+NAEVI+D S++RSG+++ VV  +F+L+KTG L+YTAR+T Y+MP++KL
Sbjct: 124 ISYLSTAPKNAEVIVDGSVVRSGRNITVVEQEFKLKKTGNLVYTARATFYHMPVSKL 178

[Close]
BLAST of Cp4.1LG03g16780 vs. NCBI nr
Match: gi|470142254|ref|XP_004306826.1| (PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 182.2 bits (461), Expect = 9.4e-43
Identity = 97/183 (53.01%), Postives = 132/183 (72.13%), Query Frame = 1 

Query: 27  PSSSETPSSSATPSLIFDSPTIQIKDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSD 86
           PS+ ET S ++T S+         KD+ E  ++  ++ L   G SG +PD CNTK FYS 
Sbjct: 7   PSTIETESFASTASIS--------KDLPENHVKHLLQFLKLSGVSGPLPDHCNTKDFYSY 66

Query: 87  IIRGHLRQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKEL 146
           ++ G L+   + RGR+T L+SVKPA SN +G  HGG +AA AE  + A ARTV+AEDKEL
Sbjct: 67  LVLGILKPLNIHRGRVTCLVSVKPAFSNFFGGFHGGAIAAVAEAVAFATARTVVAEDKEL 126

Query: 147 FLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPM 206
           FLGELSI+YLS AP+NAEVI D S++RSG++L V+A +F+L++TGKLIYTAR+T Y+ P+
Sbjct: 127 FLGELSIAYLSSAPKNAEVIADGSVVRSGRNLTVIAQEFKLKETGKLIYTARATFYHTPV 181

Query: 207 AKL 210
           +KL
Sbjct: 187 SKL 181

[Close]
BLAST of Cp4.1LG03g16780 vs. NCBI nr
Match: gi|225453706|ref|XP_002270993.1| (PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera])

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42
Identity = 89/159 (55.97%), Postives = 117/159 (73.58%), Query Frame = 1 

Query: 51  KDMSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIRGHLRQRRLERGRLTYLLSVKP 110
           + + E  L  T+     +G +  +P +C  K FYS +IRG L+ +R+ERG LT L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 111 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 170
           AV+N YG LHGG VA   E  SIACARTV+AEDKELFLGELS+SYLS AP  AEV+ DAS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 171 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 210
           ++RSG+++ V+A++F+++KT KLIYT R+T YNMP+AKL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g16780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g16780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3N5_CUCSA3.2e-6672.78Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1[more]
D7U7H7_VITVI1.1e-4255.97Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=... [more]
V4TXQ0_9ROSI1.1e-4052.83Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022587mg PE=4 SV=1[more]
A0A067H2E8_CITSI2.3e-4052.20Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031046mg PE=4 SV=1[more]
M5X5K0_PRUPE4.4e-3960.14Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019925mg PE=4 S... [more]
BLAST of Cp4.1LG03g16780 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61200.11.6e-2433.67 Thioesterase superfamily protein[more]
AT1G04290.12.3e-1030.71 Thioesterase superfamily protein[more]
BLAST of Cp4.1LG03g16780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075319|ref|XP_008438081.1|1.5e-7278.45PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo][more]
gi|449432177|ref|XP_004133876.1|4.7e-6672.78PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus][more]
gi|470142256|ref|XP_004306827.1|1.5e-4354.24PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca][more]
gi|470142254|ref|XP_004306826.1|9.4e-4353.01PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp... [more]
gi|225453706|ref|XP_002270993.1|1.6e-4255.97PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006683Thioestr_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
molecular_function GO:0047617 acyl-CoA hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16780.1Cp4.1LG03g16780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 116..192
score: 1.
NoneNo IPR availablePANTHERPTHR21660THIOESTERASE SUPERFAMILY MEMBER-RELATEDcoord: 14..209
score: 1.5
NoneNo IPR availablePANTHERPTHR21660:SF12SUBFAMILY NOT NAMEDcoord: 14..209
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g16780Cucsa.258150Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g16780CmaCh14G020180Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g16780CmaCh06G010980Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g16780CmoCh06G011250Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g16780CmoCh14G020780Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g16780Cla021255Watermelon (97103) v1cpewmB613
Cp4.1LG03g16780Csa3G122640Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g16780MELO3C006135Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g16780ClCG05G001750Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g16780CSPI03G09020Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g16780Lsi05G020160Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g16780MELO3C006135.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g16780CsaV3_3G009140Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g16780Bhi01G000280Wax gourdcpewgoB0788
Cp4.1LG03g16780CsGy3G009090Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g16780Carg24951Silver-seed gourdcarcpeB0922
Cp4.1LG03g16780Carg14795Silver-seed gourdcarcpeB0884
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g16780Cp4.1LG08g01550Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g16780Cucurbita pepo (Zucchini)cpecpeB052
Cp4.1LG03g16780Cucurbita pepo (Zucchini)cpecpeB242
Cp4.1LG03g16780Cucurbita maxima (Rimu)cmacpeB639
Cp4.1LG03g16780Watermelon (Charleston Gray)cpewcgB556
Cp4.1LG03g16780Watermelon (97103) v1cpewmB612
Cp4.1LG03g16780Wax gourdcpewgoB0774