Carg24951 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24951
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	acyl-coenzyme A thioesterase 13
Location	Cucurbita_argyrosperma_scaffold_290 : 140168 .. 143961 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTAAATTATCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGAAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTTCTCATCGTCAAACCTGTTGTCTCCGTAAGTTCTCAATTCTTTTTTCAAGTTTGTTTTCTCGTCGACTTTAGGAAGAGAAATTTGGTATTCGGTTTATACTGTTGCGTATTCCTTGTGTCTGATTTGAATCGAATTGATATCTTTGGAGACTTGAAAAATTAGCTATTCATCATTAGAGCGGGAATAGCTCAGAAAATGAAGTGTTTGGTTAGAATCGAAACAATATTTTTGAGAACTTGAAAGTTCACTATTCATCTATCGTTATAGTGATGTCTTTGGTTGCTGAGAAAATGAAGCATCTGATTTGAATTGAGATGATACATTTGGATACTTTCAATTTTCTGTTCATCATTATACTAATCTGTTTGCTCGCCGTGAAAATGTGGTGATTGATTTGAATCGGAACAGCTTCCGCGGGAACTTGAAAACAAAGCATTCATCATCATAGTGGTCTATTTGTTTGCTGAGAATATGTGCCTTTTCAAATTCTCGTTATTTGCATCTTTCAGTTTGAGTTCATGTGGATTCATCTATCTGATGAATTAAAAACCGAATATCAATATGTTTGCATTCACATTAACAACAGGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGTGAGTAAATTTCAAGTAATTCCTGTGCTCCCTTATGATTTGTTTGAGTTAGGAGTGCAAGTAGGTTAGTTAAGCTGCTGAGGAAACTGACTCTCGAATTGACCAAAACTGAGTCCAACCAAATCAAAACTAACCAAAATTGAAATAAGCCATAGCCAACAAAGTCAAATGGATCAAGAATGAGAATTCAAATTGAATGAATTGAATTAGTTAATTCAGCCAGTTTTGGCAATTTCGGTTTCGGGAGCTGGGACGTGTTTTGATGGAAACTGGATGTATAAATTTCTTAGACGTTAGAGTCCTCAGATTGTTTTGCTGGTCCTGCATGCTTAAACCTTTTGTGTACTTAGCCATACATGGGTGGGAGGGTTGCATGATTCTACCGGTGGCAATGGTTTATAACTTGAGACAGGGCCATTTTATCTTCTTATGATTTGAAACTGATATTATCATGGTGTCTTTTTTATCGAATGGTATATTTCCATGGCTTTGCTGACTTTAGCTCACTTCCAGCCACCTTGCGCTTGTAGATTATGGGAAAATACCATTCATTTTCTTTATTAGGAGGATTAAGTGGAGGTACATCCATTCAAATCATGAATTTTCAAAATGAGAGATCAAGAATTAAATCATAATTACCACCCTCTGCAATCCTATAGGTATAACATCAGTAATATGATTGCCACCACACTTCAGATCAGAGCAACAAATGGGACTGAGTTAGGTTGGATGTTTTAGGACACAAACATAGTAGTTTGGTACCATGTGAACAAGAAGGGTCTGAGTACATAACACAAATATAAATATAACTAGGTGCTCTGACCAAGCCTTGAGTACATTAATGATTGCATCTAGTGTTCGATTCAGACTTCGGTACCGATCAACTTATGGAGGATATGAAAGATGGTATTTCAATCGCATTTTGTTGTTCAAAGATTGGTTTCGGCATTCACATCCAGGAAAGTATGAACACACAAGAAAAAACCATCAATACAATACAAAGGAGGTGGCTGGTCTCAATGGAGAGGAGAGTTTTGACAGCGAGGGAGGCAGGGGTGCGTTGGTATCGTATATATATAAAAGGCTACCTGTCGGTTTCACAATTCCATTGCCTGAACTACTTCCTGAACCTTTTAGTCTCTCTTGTAAAGAAAGGATAGGGAAGGATTTCATATGCGAGTTAAGGAGAATGAAGAAATGATAGCTTGTGACCCTCTTTCAAAATCGAAGTACAGTGATCTGCTTTAACTGCTGAATGACTTCCAATTGGTATTTGAGTCATATTTGTGAATTTAAATGCAGTTTTGATTGTTCAAGTAGCTTGCTTATGATTAAAAATCTTAGCTTTACATACCTTTTCACTCAATTTGAGCTTTACCAAGATCATGCTATCTTCCACGACCTTACTTAAACAGGACCCGTTCTTTAGAAGTTTTCTGAAAAATTGTGTTGTTGCAGGCAGAGGTTGTGGTAGATGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTCTGTGTTTTTATTCTGTTTGAACAAACATGTCAAATATATGTACTTGTGTAACGTTGAAAAGAGTAGGCAAATATATTGATTAGAATCTTGATTATCCTTGTATACTATTTATAATCTAGACAAATTACTGTTGTTCCATGCTATATTTATAAATTACATCAAATAGATGCAATCTTAGTTGCTATAGAGTTTGGACTTCAAGATACTCGATTTCTTTTTAGTTCAACATTTTGAGGCGAGAATTTGAACTTATAACCTTTTAATTGAGTACATGTCAAACAAAGTCTCGCATTAGTTAGAAAAGATAGGAAAAAGAGTAGTCATAGCATATAATTGAGGACATTTATTTTATTGGTACGAGTTTTTTTGGGTGGAACAAAAAAGAGAGCAATGACGGCTTAGGTCTACAATGGACAATATCATTTTATTGTAGAGATGGGTAAATATTTCATTGTCCGTTTGAAACATAAAAGTTAGTCTATTTGACTCGTGCAACCTTGTGTTTACACGTCATAAAATTATTTGGTTCTACACCTAGGTGAGCAATTGTCATATATGCCTATATATAATATTCTTTTTTAACTTTTTGCAACTTTTGTCTCTTTTAGTTTTCATTCAAACTGGATAAATAGAATAATACCTATTTTTGTGATGTTGGATTGAGTAGATTACATTGCGTCCTTAATTAGAGATATTATGGTAATTAATGAAGTTAAATACCAACTTTTTTTTTTCTTTTGTAAAAATAAAATCCTATAAATATAGTCCTAATAATCACTAATGACCAAATCATATGAAATAACATAGGCACATGGATGAGAACAAAATAATGAAGTCGAGTTCAAGCTACAATCTCTTCATCTTGATTCTTTTTATAATTTCGTACAAATGTCTTCTAACTACAACGTCTCAGTGATTATTAGTGATCAAAGTCGGTTTGTTTTGAGAGGGAGTTCTCTCTACCCGACCCCTAGGTTGTTCCTCCTTTGTTGTTTTGCATACATTTTCGCTTTGGTTCTGATAAGCAATTCCAAAGAAAGACCTATCAACATCTATCGTTAAATCACTAAGATTCGTGCTTGCAATATATCATT

mRNA sequence

TTTGTTAAATTATCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGAAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTTCTCATCGTCAAACCTGTTGTCTCCGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGATGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTCTGTGTTTTTATTCTGTTTGAACAAACATGTCAAATATATGTACTTGTGTAACGTTGAAAAGAGTAGGCAAATATATTGATTAGAATCTTGATTATCCTTGTATACTATTTATAATCTAGACAAATTACTGTTGTTCCATGCTATATTTATAAATTACATCAAATAGATGCAATCTTAGTTGCTATAGAGTTTGGACTTCAAGATACTCGATTTCTTTTTAGTTCAACATTTTGAGGCGAGAATTTGAACTTATAACCTTTTAATTGAGTACATGTCAAACAAAGTCTCGCATTAGTTAGAAAAGATAGGAAAAAGAGTAGTCATAGCATATAATTGAGGACATTTATTTTATTGGTACGAGTTTTTTTGGGTGGAACAAAAAAGAGAGCAATGACGGCTTAGGTCTACAATGGACAATATCATTTTATTGTAGAGATGGGTAAATATTTCATTGTCCGTTTGAAACATAAAAGTTAGTCTATTTGACTCGTGCAACCTTGTGTTTACACGTCATAAAATTATTTGGTTCTACACCTAGGTGAGCAATTGTCATATATGCCTATATATAATATTCTTTTTTAACTTTTTGCAACTTTTGTCTCTTTTAGTTTTCATTCAAACTGGATAAATAGAATAATACCTATTTTTGTGATGTTGGATTGAGTAGATTACATTGCGTCCTTAATTAGAGATATTATGGTAATTAATGAAGTTAAATACCAACTTTTTTTTTTCTTTTGTAAAAATAAAATCCTATAAATATAGTCCTAATAATCACTAATGACCAAATCATATGAAATAACATAGGCACATGGATGAGAACAAAATAATGAAGTCGAGTTCAAGCTACAATCTCTTCATCTTGATTCTTTTTATAATTTCGTACAAATGTCTTCTAACTACAACGTCTCAGTGATTATTAGTGATCAAAGTCGGTTTGTTTTGAGAGGGAGTTCTCTCTACCCGACCCCTAGGTTGTTCCTCCTTTGTTGTTTTGCATACATTTTCGCTTTGGTTCTGATAAGCAATTCCAAAGAAAGACCTATCAACATCTATCGTTAAATCACTAAGATTCGTGCTTGCAATATATCATT

Coding sequence (CDS)

ATGGCGAAACCTTCTTCACCAGAAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTTCTCATCGTCAAACCTGTTGTCTCCGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGATGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAA

Protein sequence

MAKPSSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL

Homology

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BLAST of Carg24951 vs. NCBI nr
Match: XP_023538828.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.9 bits (860), Expect = 8.8e-89
Identity = 179/186 (96.24%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 60
           MAKPSSP ASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR
Sbjct: 1   MAKPSSPAASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 60

Query: 61  SHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGED 120
           SHLRQLSLERGRITYLLIVKPVVS      NIYGFLHGGFVAAAAEFSSIACARTVLGED
Sbjct: 61  SHLRQLSLERGRITYLLIVKPVVS------NIYGFLHGGFVAAAAEFSSIACARTVLGED 120

Query: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180
           KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS
Sbjct: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180

Query: 181 MPMPKL 187
           MPMPKL
Sbjct: 181 MPMPKL 180

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BLAST of Carg24951 vs. NCBI nr
Match: XP_022934057.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita moschata])

HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88
Identity = 178/186 (95.70%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 60
           MAKPSSPEASSLILESPAIQIKNMSEEDLH+TIQMLNGLRGFVQIPDDCNTEGFYSDISR
Sbjct: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHKTIQMLNGLRGFVQIPDDCNTEGFYSDISR 60

Query: 61  SHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGED 120
           +HLRQLSLERGRITYLLIVKPVVS      NIYGFLHGGFVAAAAEFSSIACARTVLGED
Sbjct: 61  NHLRQLSLERGRITYLLIVKPVVS------NIYGFLHGGFVAAAAEFSSIACARTVLGED 120

Query: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180
           KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS
Sbjct: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180

Query: 181 MPMPKL 187
           MPMPKL
Sbjct: 181 MPMPKL 180

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BLAST of Carg24951 vs. NCBI nr
Match: XP_022975097.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita maxima])

HSP 1 Score: 323.2 bits (827), Expect = 5.9e-85
Identity = 173/186 (93.01%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 60
           MAKPSSP ASSLILESP IQIKNMSEEDLH+TIQMLNGLRGFVQIP DCNTEGFYSDISR
Sbjct: 1   MAKPSSPAASSLILESPTIQIKNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISR 60

Query: 61  SHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGED 120
           SHLRQLSLERGRITYLLIVKPVVS      NIYGFLHGGFVAAAAEFSSIACARTV+GE+
Sbjct: 61  SHLRQLSLERGRITYLLIVKPVVS------NIYGFLHGGFVAAAAEFSSIACARTVVGEN 120

Query: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180
           KALFLGELSISYLSGAPQNAEVVV ASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS
Sbjct: 121 KALFLGELSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180

Query: 181 MPMPKL 187
           MPMPKL
Sbjct: 181 MPMPKL 180

[Close]

BLAST of Carg24951 vs. NCBI nr
Match: XP_022924378.1 (acyl-coenzyme A thioesterase 13-like [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 60
           MAKPSS    SLI +SP IQIK++SEEDL  TI++LNGL G  QIPDDCNT+GFYSDI R
Sbjct: 1   MAKPSSSATPSLIFDSPTIQIKDVSEEDLRGTIELLNGLGGSGQIPDDCNTKGFYSDIIR 60

Query: 61  SHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGED 120
            HLRQ  LERGR+TYLL VKP VS      N YGFLHGGFVAAAAEFSSIACARTV+ ED
Sbjct: 61  GHLRQRRLERGRLTYLLSVKPAVS------NRYGFLHGGFVAAAAEFSSIACARTVMAED 120

Query: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180
           K LFLGELSISYLSGAP NAEV++DAS+LRSGK L +++I+FRLQKTGKLVYTARSTLY+
Sbjct: 121 KELFLGELSISYLSGAPPNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLVYTARSTLYN 180

Query: 181 MPMPKL 187
           MPM KL
Sbjct: 181 MPMAKL 180

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BLAST of Carg24951 vs. NCBI nr
Match: XP_008438081.1 (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 137/182 (75.27%), Postives = 154/182 (84.62%), Query Frame = 0


Query: 5   SSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLR 64
           SS E  SLI +SP IQIK +SEEDL ETIQM NGL G  QIPDDC+T+ FYS I+R HLR
Sbjct: 9   SSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHITRGHLR 68

Query: 65  QLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALF 124
           QL  ERGR+TYLL VKP VS      NIYG+LHGGFVAAAAEF SIACARTV+GEDK LF
Sbjct: 69  QLRRERGRLTYLLCVKPAVS------NIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLF 128

Query: 125 LGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMP 184
           +GELSISYLSGAP+NAEVVVDASVLRSG+SL+++ +EF+LQKTGKLVYTARSTLY+MPM 
Sbjct: 129 IGELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMA 184

Query: 185 KL 187
           KL
Sbjct: 189 KL 184

[Close]

BLAST of Carg24951 vs. TAIR10
Match: AT3G61200.1 (Thioesterase superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 3.8e-25
Identity = 55/132 (41.67%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 55  YSDISRSHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACAR 114
           +S + +++ R LS+ RGR++  + V P +S      N +  LHGG VA+ AE  ++AC +
Sbjct: 63  FSVLFQNNTRALSIARGRVSCSVTVTPGIS------NFFKGLHGGAVASIAERVAMACVK 122

Query: 115 TVLGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTA 174
           TV+ EDK LF+GELS+SYLS AP ++E++V+ +V+R+G++L+++++EF++++T K+ Y +
Sbjct: 123 TVVSEDKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLS 182

Query: 175 RSTLYSMPMPKL 187
           R+T Y  P+ KL
Sbjct: 183 RATFYHSPISKL 188

[Close]

BLAST of Carg24951 vs. TAIR10
Match: AT1G04290.1 (Thioesterase superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 7.1e-08
Identity = 36/119 (30.25%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 68  LERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGE 127
           +E GRI   + + P         N   FLHGG  A   +    A   T  G   +    E
Sbjct: 44  IEPGRIVCSMKIPP------HLLNAGKFLHGGATATLVDLIGSAVIYTA-GASHSGVSVE 103

Query: 128 LSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 187
           +++SYL  A  + E+ +++  LR GK++ ++S+E R + TGK++   R T Y  P   L
Sbjct: 104 INVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

[Close]

BLAST of Carg24951 vs. Swiss-Prot
Match: sp|Q9NPJ3|ACO13_HUMAN (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-04
Identity = 30/96 (31.25%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 83  VSVSVKFQNIYGFLHGGFVAAAAE-FSSIACARTVLGEDKALFLGELSISYLSGAPQNAE 142
           + V  +  N  G LHGG  A   +  S++A   T  G        +++I+Y+S A    +
Sbjct: 42  MKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSV--DMNITYMSPAKLGED 101

Query: 143 VVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARST 178
           +V+ A VL+ GK+L   S++   + TGKL+   R T
Sbjct: 102 IVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Carg24951 vs. Swiss-Prot
Match: sp|Q5R833|ACO13_PONAB (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-04
Identity = 30/96 (31.25%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 83  VSVSVKFQNIYGFLHGGFVAAAAE-FSSIACARTVLGEDKALFLGELSISYLSGAPQNAE 142
           + V  +  N  G LHGG  A   +  S++A   T  G        +++I+Y+S A    +
Sbjct: 42  MKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSV--DMNITYMSPAKLGED 101

Query: 143 VVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARST 178
           +V+ A VL+ GK+L   S++   + TGKL+   R T
Sbjct: 102 IVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Carg24951 vs. Swiss-Prot
Match: sp|Q9CQR4|ACO13_MOUSE (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.0e-04
Identity = 30/96 (31.25%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 83  VSVSVKFQNIYGFLHGGFVAAAAE-FSSIACARTVLGEDKALFLGELSISYLSGAPQNAE 142
           + V  +  N  G LHGG  A   +  S++A   T  G        +++I+Y+S A    E
Sbjct: 42  MKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSV--DMNITYMSPAKIGEE 101

Query: 143 VVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARST 178
           +V+ A +L+ GK+L   S++   + TGKL+   R T
Sbjct: 102 IVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135

[Close]

BLAST of Carg24951 vs. TrEMBL
Match: tr|A0A1S3AVH8|A0A1S3AVH8_CUCME (acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103483296 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.8e-67
Identity = 137/182 (75.27%), Postives = 154/182 (84.62%), Query Frame = 0


Query: 5   SSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLR 64
           SS E  SLI +SP IQIK +SEEDL ETIQM NGL G  QIPDDC+T+ FYS I+R HLR
Sbjct: 9   SSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHITRGHLR 68

Query: 65  QLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALF 124
           QL  ERGR+TYLL VKP VS      NIYG+LHGGFVAAAAEF SIACARTV+GEDK LF
Sbjct: 69  QLRRERGRLTYLLCVKPAVS------NIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLF 128

Query: 125 LGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMP 184
           +GELSISYLSGAP+NAEVVVDASVLRSG+SL+++ +EF+LQKTGKLVYTARSTLY+MPM 
Sbjct: 129 IGELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMA 184

Query: 185 KL 187
           KL
Sbjct: 189 KL 184

[Close]

BLAST of Carg24951 vs. TrEMBL
Match: tr|A0A0A0L3N5|A0A0A0L3N5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122640 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.8e-59
Identity = 123/182 (67.58%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 5   SSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLR 64
           SS    SLI  SP IQIK+MSE++L  TIQM N L G   IPDDC+T+ FYS I+  H+R
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 65  QLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALF 124
           QL  ERGR+TYLL VKP V+      N+YGFLHGGFVA  AE  SIACARTV+GEDK LF
Sbjct: 66  QLHRERGRLTYLLCVKPAVA------NVYGFLHGGFVATVAELVSIACARTVVGEDKKLF 125

Query: 125 LGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMP 184
           +GELSISYLSGAP+NAEV+V+ASVLRSG+SL+++ +EF+LQKTGKLVYTAR TLY+MPM 
Sbjct: 126 IGELSISYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMA 181

Query: 185 KL 187
           KL
Sbjct: 186 KL 181

[Close]

BLAST of Carg24951 vs. TrEMBL
Match: tr|A0A2P5BVV0|A0A2P5BVV0_PARAD (Thioesterase domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_206080 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.0e-40
Identity = 92/172 (53.49%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 16  SPAIQI-KNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLRQLSLERGRIT 75
           SP + I  ++S E +   +  L G+     IPD C+T+GF+SD+  + L+ LS+  G ++
Sbjct: 14  SPTVNISSDLSPEFVDRLLLFLAGVGVSTPIPDHCDTKGFFSDVVSATLKPLSVSPGHVS 73

Query: 76  YLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLS 135
            LL VKPVV+      N Y  LHGG +AAAAE  SIACARTV+ EDK LFLGE S+SYLS
Sbjct: 74  CLLTVKPVVT------NFYATLHGGALAAAAEAISIACARTVVAEDKELFLGEQSMSYLS 133

Query: 136 GAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 187
            APQNAEV+ D  V+RSG++LT+++++FRL+KT KLVYTARST Y+MP+ KL
Sbjct: 134 SAPQNAEVIADGKVVRSGRNLTVVAVDFRLKKTQKLVYTARSTFYNMPVAKL 179

[Close]

BLAST of Carg24951 vs. TrEMBL
Match: tr|A0A2P5F2J2|A0A2P5F2J2_9ROSA (Thioesterase domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_120770 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.6e-40
Identity = 91/172 (52.91%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 16  SPAIQI-KNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLRQLSLERGRIT 75
           SP + I  ++S E +   +  L G+     IPD C+T+GF+SD+  + L+ LS+  G ++
Sbjct: 14  SPTVNISSDLSPEFVDRLLLFLAGVGVSTPIPDHCDTKGFFSDVVSATLKPLSVSAGHVS 73

Query: 76  YLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLS 135
            LL VKPVV+      N Y  LHGG +AAAAE  SIACARTV+ EDK LFLGE S+SYLS
Sbjct: 74  CLLTVKPVVT------NFYATLHGGALAAAAEAISIACARTVVAEDKELFLGEQSMSYLS 133

Query: 136 GAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 187
            APQNAEV+ D  V+RSG++LT+++++F+L+KT KLVYTARST Y+MP+ KL
Sbjct: 134 SAPQNAEVIADGKVVRSGRNLTVVAVDFKLKKTQKLVYTARSTFYNMPVAKL 179

[Close]

BLAST of Carg24951 vs. TrEMBL
Match: tr|A0A2P6SGQ6|A0A2P6SGQ6_ROSCH (Putative HotDog domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0352831 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.6e-40
Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 1   MAKPSSPEASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISR 60
           MAKP      S    S A   K++ EE L++ ++ L  +     +PD CNTE FYSD+  
Sbjct: 1   MAKPPIALLESFASNSRATISKDIPEEHLNQLLRFLERVGVSGHVPDYCNTEDFYSDLIG 60

Query: 61  SHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGED 120
             L+ L++ RGRIT L+ VKP V+      N +G  HGG VAA AE  S A ARTV+ ED
Sbjct: 61  GILKPLTVLRGRITCLVSVKPAVT------NKFGGFHGGAVAAVAEAVSFATARTVVAED 120

Query: 121 KALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 180
           K LFLGELSISYLS AP+NAEV++D SV+RSG++LT+++ EF+L+KTG L+YTAR+TLY 
Sbjct: 121 KELFLGELSISYLSSAPKNAEVIIDGSVVRSGRNLTVVAQEFKLKKTGNLMYTARATLYH 180

Query: 181 MPMPKL 187
           MP+ KL
Sbjct: 181 MPVSKL 180

The following BLAST results are available for this feature:

BLAST of Carg24951 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538828.1	8.8e-89	96.24	acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934057.1	1.2e-88	95.70	acyl-coenzyme A thioesterase 13-like [Cucurbita moschata]	[more]
XP_022975097.1	5.9e-85	93.01	acyl-coenzyme A thioesterase 13-like [Cucurbita maxima]	[more]
XP_022924378.1	1.7e-68	75.27	acyl-coenzyme A thioesterase 13-like [Cucurbita moschata]	[more]
XP_008438081.1	4.3e-67	75.27	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]	[more]

BLAST of Carg24951 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61200.1	3.8e-25	41.67	Thioesterase superfamily protein	[more]
AT1G04290.1	7.1e-08	30.25	Thioesterase superfamily protein	[more]

BLAST of Carg24951 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9NPJ3\|ACO13_HUMAN	4.6e-04	31.25	Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1	[more]
sp\|Q5R833\|ACO13_PONAB	4.6e-04	31.25	Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1	[more]
sp\|Q9CQR4\|ACO13_MOUSE	6.0e-04	31.25	Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1	[more]

BLAST of Carg24951 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVH8\|A0A1S3AVH8_CUCME	2.8e-67	75.27	acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103483296 PE=4 SV=...	[more]
tr\|A0A0A0L3N5\|A0A0A0L3N5_CUCSA	4.8e-59	67.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122640 PE=4 SV=1	[more]
tr\|A0A2P5BVV0\|A0A2P5BVV0_PARAD	5.0e-40	53.49	Thioesterase domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU...	[more]
tr\|A0A2P5F2J2\|A0A2P5F2J2_9ROSA	8.6e-40	52.91	Thioesterase domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x0...	[more]
tr\|A0A2P6SGQ6\|A0A2P6SGQ6_ROSCH	8.6e-40	52.15	Putative HotDog domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0047617	acyl-CoA hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR029069	HotDog_dom_sf
IPR039298	ACOT13
IPR006683	Thioestr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0047617	acyl-CoA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24951-RA	Carg24951-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 93..168 e-value: 1.4E-10 score: 41.3
None	No IPR available	GENE3D	G3DSA:3.10.129.10		coord: 45..180 e-value: 3.1E-18 score: 68.0
None	No IPR available	PANTHER	PTHR21660:SF12	SUBFAMILY NOT NAMED	coord: 19..186
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 89..179 e-value: 1.12843E-16 score: 71.435
IPR039298	Acyl-coenzyme A thioesterase 13	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 19..186
IPR029069	HotDog domain superfamily	SUPERFAMILY	SSF54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 85..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24951	Cla021255	Watermelon (97103) v1	carwmB0647
Carg24951	Csa3G122640	Cucumber (Chinese Long) v2	carcuB0668
Carg24951	MELO3C006135	Melon (DHL92) v3.5.1	carmeB0647
Carg24951	ClCG05G001750	Watermelon (Charleston Gray)	carwcgB0630
Carg24951	CSPI03G09020	Wild cucumber (PI 183967)	carcpiB0677
Carg24951	Cucsa.258150	Cucumber (Gy14) v1	carcgyB0723
Carg24951	CmaCh06G010980	Cucurbita maxima (Rimu)	carcmaB0919
Carg24951	CmaCh14G020180	Cucurbita maxima (Rimu)	carcmaB0918
Carg24951	CmoCh06G011250	Cucurbita moschata (Rifu)	carcmoB0892
Carg24951	CmoCh14G020780	Cucurbita moschata (Rifu)	carcmoB0891
Carg24951	Lsi05G020160	Bottle gourd (USVL1VR-Ls)	carlsiB592
Carg24951	Cp4.1LG03g16780	Cucurbita pepo (Zucchini)	carcpeB0922
Carg24951	Cp4.1LG08g01550	Cucurbita pepo (Zucchini)	carcpeB0923
Carg24951	CsGy3G009090	Cucumber (Gy14) v2	carcgybB0644
Carg24951	MELO3C006135.2	Melon (DHL92) v3.6.1	carmedB0657
Carg24951	CsaV3_3G009140	Cucumber (Chinese Long) v3	carcucB0679
Carg24951	Cla97C05G082180	Watermelon (97103) v2	carwmbB0676
Carg24951	Bhi01G000280	Wax gourd	carwgoB0763

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24951	Carg14795	Silver-seed gourd	carcarB548

The following block(s) are covering this gene:

None