CmaCh14G020180 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G020180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Thioesterase family protein
Location	Cma_Chr14 : 14111425 .. 14113622 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCGTTAATCTTCGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGGACTATAGAATTGCTCAATGGATTGAGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCTGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCGTAATTTCTTAATTCTCCATCCAGATTTGTTTTCTCATCGAATTTAGGAGAAATTTGGTATGCGGTTTCTAATACTGTGCGTTCCTTGTGTTGCGTCTGATTTGAATCGAAACAATATCTTGCGGAACTTGAAATTCGATGTTTGATTTGAATCGAAGCAATATCTTTGAGTTCTTGAAAATTCATGCTGAGAAAATTTGGTGCCTGATTTGAATCGAAACGGTATCTATTGGATCTTGAAAACTTAGTATCGGTCTGTTTGAATTTTGATTGCTGAGATTTTTCAAATTCTCTTCATCTGCTTCTATCAGCTTTCGGTCAATATTGTTTCCATTCACATTAAACAGAGATATCTATTGTATAATTTCAGAATCGCTATGGTTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGTGAGTAAAATTTAAGTTACTGTTGTGCTTCCTCCTGATTATTTGAGTAGGTTAGTTAAGTTGACCGAATTGTCTACCGAATTGACCAAAACTGAATCGAACCTAAAGAATCCAACAAAACTAACCAAAATTGAAATGAGCTAGTTGAACCAACAAAATCCGAACGAATCATCAAGAATGACACTTCAAATTGAATGAACTGAATTGGTTAATTCAGCTGGTTTTCTTGGGATTTTATTTTTTCTGTTTCGAAAGCTGGGAAGTTTATAATAGAAATTGAATGTTGAGATTTCTCAGATGATAGAGCCCTGAGAAACTGAGAATGTTTTCCTGGACCAGCAAACTTTTGGGTACCCATGCATGGGCTGAAGGGTCGCATGAATCTGTCTGTGGCCTATAAATTTGGATGGGACCACTTATCTTCTTATGATTTGAAACTCATCCTACCATTGTGCTTAATTGTTTATTATTGGTTGGGGTATTCACTTCCAACAATCTTGCCCTTCATAAGTTTTCATCTGGATTCTGAGTTTCTAATTGAGGGCACTCTCATTGAGGGATTAAGAATTAAACGATAATTGTCAAAACTTTATAATATTCTTGATGTCAACATCAAAACTAGAACCCACAACTGGGACCGAGTTCGCTTGGGTGTTATAGGATGGATACAAATATAGTAGTTTGTATGATGTGAATAAGAACGGTCTTAGCGTATAACATAGAAAATTGTATGACCAAACAAATAGGACAGAGTAAACATAGTTTTGAATGTTCAAGTAGCTTTACTTATGATGATAATATCCAAGCTTGACATACATTTTACTCGATTATTTGTCCCGGCCTCGATACTTTAGCAAGGTGCGTTATTTATAAAAAAAACCGTTCTTGCAGGCAGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAAATATCTCCAACAATCTCGAGTTTGTATTCAGGTTGAATAATCGTGTCAAATGTATTTACTATTGCAAAGTTGGAAAGAGTAGGGAAATGTATGGATTAGATGCTTTTGATTATTGTCCTTGTATATTTATTTACAATTTGTAGGAAAAAAGTGGAAGCTTTGGTTCAGTTTTGCAATCAATGGTGAACCTATTGATAATTGAATTAAATAAATAATAATATTTATACATTAG

mRNA sequence

ATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCGTTAATCTTCGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGGACTATAGAATTGCTCAATGGATTGAGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCTGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCAATCGCTATGGTTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGCAGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAAATATCTCCAACAATCTCGAGTTTGTATTCAGGTTGAATAATCGTGTCAAATGTATTTACTATTGCAAAGTTGGAAAGAGTAGGGAAATGTATGGATTAGATGCTTTTGATTATTGTCCTTGTATATTTATTTACAATTTGTAGGAAAAAAGTGGAAGCTTTGGTTCAGTTTTGCAATCAATGGTGAACCTATTGATAATTGAATTAAATAAATAATAATATTTATACATTAG

Coding sequence (CDS)

ATGGCGAAACCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCTTCTTCAGCAACTCCTTCTTCTTCAGAAACTCCTTCGTTAATCTTCGACTCTCCGACGATTCAGATAAAGGATATGTCTGAAGAGGACCTACGCGGGACTATAGAATTGCTCAATGGATTGAGCGGTTCCGGCCAAATTCCGGACGATTGCAACACCAAGGGATTCTATTCCGATATCATTCGCGGTCATCTCTGGCAGCGCCGCCTCGAACGAGGCCGTCTGACCTACCTCCTCTCCGTCAAACCTGCTGTATCCAATCGCTATGGTTTTCTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCCCGAACTGTCATGGCAGAGGATAAGGAGTTATTTCTTGGGGAACTAAGCATCTCTTATCTCTCAGGCGCTCCACGAAATGCAGAGGTCATAATCGATGCTTCTATTTTAAGGAGTGGAAAACATTTGAATGTAGTTGCTATAGATTTCAGACTTCAAAAGACAGGAAAGTTGATCTACACAGCTCGTTCTACCCTTTATAACATGCCAATGGCAAAGTTGTAA

Protein sequence

MAKPSSSATPSSSATPSSSATPSSSETPSSSATPSSSATPSSSATPSSSETPSSSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL

Homology

[Close]

BLAST of CmaCh14G020180 vs. TrEMBL
Match: A0A0A0L3N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.7e-66
Identity = 130/176 (73.86%), Postives = 150/176 (85.23%), Query Frame = 1


Query: 59  SSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLW 118
           SSS  PSLIF SPTIQIKDMSE++L GTI++ N L+GSG IPDDC+TK FYS I  GH+ 
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 119 QRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSI 178
           Q   ERGRLTYLL VKPAV+N YGFLHGGFVA  AE  SIACARTV+ EDK+LF+GELSI
Sbjct: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125

Query: 179 SYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           SYLSGAP NAEVI++AS+LRSG+ L+VV ++F+LQKTGKL+YTAR TLYNMPMAKL
Sbjct: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]

BLAST of CmaCh14G020180 vs. TrEMBL
Match: D7U7H7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 8.1e-42
Identity = 88/159 (55.35%), Postives = 115/159 (72.33%), Query Frame = 1


Query: 76  KDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQRRLERGRLTYLLSVKP 135
           + + E  L  T+     +  +  +P +C  K FYS +IRG L  +R+ERG LT L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 136 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 195
           AV+N YG LHGG VA   E  SIACARTV+AEDKELFLGELS+SYLS AP  AEV+ DAS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 196 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           ++RSG+++ V+A++F+++KT KLIYT R+T YNMP+AKL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

[Close]

BLAST of CmaCh14G020180 vs. TrEMBL
Match: V4TXQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022587mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-39
Identity = 83/159 (52.20%), Postives = 116/159 (72.96%), Query Frame = 1


Query: 76  KDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQRRLERGRLTYLLSVKP 135
           K++  ED+   I  L  +  S  IPDDC T   YS+I+  H+   +++RGRL   LSVKP
Sbjct: 8   KEVDPEDVSKVIVFLKEVGASSSIPDDCCTNDSYSNILGRHIKVHKIQRGRLICHLSVKP 67

Query: 136 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 195
           A+ N +  +HGG +AA +E  +IACARTV+AEDKE+FLGEL ISYLS APRNAE+I++AS
Sbjct: 68  AILNFFDGIHGGAIAAFSERMAIACARTVVAEDKEIFLGELGISYLSAAPRNAELIMEAS 127

Query: 196 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           ++RSG+++ VVA++F+   TGKL+  +R+T YN P+AKL
Sbjct: 128 VVRSGRNVTVVAVEFKFNDTGKLVCASRATFYNTPIAKL 166

[Close]

BLAST of CmaCh14G020180 vs. TrEMBL
Match: A0A067H2E8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031046mg PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.9e-39
Identity = 82/159 (51.57%), Postives = 115/159 (72.33%), Query Frame = 1


Query: 76  KDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQRRLERGRLTYLLSVKP 135
           K++  ED+   I  L  +  S  IPDDC T   YS+I+  H+   +++RGRL   LSVKP
Sbjct: 8   KEVDPEDVSKVIVFLKEVGASSSIPDDCCTNDSYSNILGRHIKVHKIQRGRLICHLSVKP 67

Query: 136 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 195
           A+ N +G +HGG +AA +E  +IACARTV+AEDKE+FLGEL ISYLS AP NAE+I++AS
Sbjct: 68  AILNFFGGIHGGAIAAFSERMAIACARTVVAEDKEIFLGELGISYLSAAPHNAELIMEAS 127

Query: 196 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           ++RSG+++ VVA++F+   TGKL+  + +T YN P+AKL
Sbjct: 128 VVRSGRNVTVVAVEFKFNDTGKLVCASHATFYNTPIAKL 166

[Close]

BLAST of CmaCh14G020180 vs. TrEMBL
Match: M5X5K0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019925mg PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.9e-38
Identity = 85/140 (60.71%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 96  SGQIPDDCNTK-GFYSDIIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAE 155
           SG +PD  + K   YSD++R  L    + RG +T L+SVKPAV N +   HGG VAA AE
Sbjct: 4   SGHVPDQFDAKKDSYSDLVRDLLEPLHISRGHVTCLVSVKPAVINFFAGFHGGAVAAVAE 63

Query: 156 FSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQK 215
             SIACARTVMA+DKE+FLGELSISYL+ A +NAEVI+DAS++RSG++L+V+A++F+L+K
Sbjct: 64  AVSIACARTVMAKDKEIFLGELSISYLASAKKNAEVIVDASVVRSGRNLSVIALEFKLKK 123

Query: 216 TGKLIYTARSTLYNMPMAKL 235
           TG LIYTAR+T Y+MP AKL
Sbjct: 124 TGDLIYTARATFYHMPAAKL 143

[Close]

BLAST of CmaCh14G020180 vs. TAIR10
Match: AT3G61200.1 (AT3G61200.1 Thioesterase superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-24
Identity = 64/187 (34.22%), Postives = 114/187 (60.96%), Query Frame = 1


Query: 48  SSETPSSSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKG 107
           S E    S+TP SS+T        T   K +    +    +    +S      D  +   
Sbjct: 11  SPEDTDMSSTPISSDT--------TAVSKVIDPNYVLMVADFFKAISPDESCNDFTSFDS 70

Query: 108 FYSDIIRGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAE 167
           F S + + +     + RGR++  ++V P +SN +  LHGG VA+ AE  ++AC +TV++E
Sbjct: 71  F-SVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSE 130

Query: 168 DKELFLGELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLY 227
           DK LF+GELS+SYLS AP ++E++++ +++R+G++L+VV ++F++++T K+ Y +R+T Y
Sbjct: 131 DKHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFY 188

Query: 228 NMPMAKL 235
           + P++KL
Sbjct: 191 HSPISKL 188

[Close]

BLAST of CmaCh14G020180 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-10
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 1


Query: 122 LERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYL 181
           +E GR+   + + P + N   FLHGG  A   +    A   T  A    + + E+++SYL
Sbjct: 44  IEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSV-EINVSYL 103

Query: 182 SGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
             A  + E+ I++  LR GK + VV+++ R + TGK+I   R T Y  P + L
Sbjct: 104 DAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: gi|659075319|ref|XP_008438081.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 9.8e-73
Identity = 142/181 (78.45%), Postives = 162/181 (89.50%), Query Frame = 1


Query: 54  SSATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDII 113
           SS++ SSSE PSLIF SPTIQIK +SEEDLR TI++ NGL+GSGQIPDDC+TK FYS I 
Sbjct: 4   SSSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYSHIT 63

Query: 114 RGHLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFL 173
           RGHL Q R ERGRLTYLL VKPAVSN YG+LHGGFVAAAAEF SIACARTV+ EDK+LF+
Sbjct: 64  RGHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKKLFI 123

Query: 174 GELSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAK 233
           GELSISYLSGAP NAEV++DAS+LRSG+ L+VV ++F+LQKTGKL+YTARSTLYNMPMAK
Sbjct: 124 GELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMPMAK 183

Query: 234 L 235
           L
Sbjct: 184 L 184

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: gi|449432177|ref|XP_004133876.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 6.8e-66
Identity = 130/176 (73.86%), Postives = 150/176 (85.23%), Query Frame = 1


Query: 59  SSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLW 118
           SSS  PSLIF SPTIQIKDMSE++L GTI++ N L+GSG IPDDC+TK FYS I  GH+ 
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 119 QRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSI 178
           Q   ERGRLTYLL VKPAV+N YGFLHGGFVA  AE  SIACARTV+ EDK+LF+GELSI
Sbjct: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125

Query: 179 SYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           SYLSGAP NAEVI++AS+LRSG+ L+VV ++F+LQKTGKL+YTAR TLYNMPMAKL
Sbjct: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: gi|470142256|ref|XP_004306827.1| (PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca])

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42
Identity = 96/179 (53.63%), Postives = 130/179 (72.63%), Query Frame = 1


Query: 56  ATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRG 115
           A PS + T S  F S     +D+ EE L   ++ L  +  SG +PD CNT+ FYS+II G
Sbjct: 2   AKPSIALTES--FASKATISEDIPEEYLNRLLKFLERVGISGDVPDHCNTEDFYSNIIGG 61

Query: 116 HLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE 175
            L    + RGR+T L+SVKPAV+N +G  HGG +A+ AE  + A ART++AEDKELFLGE
Sbjct: 62  FLKHLAILRGRVTCLVSVKPAVTNTFGGFHGGAIASVAEAVAFATARTIVAEDKELFLGE 121

Query: 176 LSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           LSISYLS AP+NAEVI+D S++RSG+++ VV  +F+L+KTG L+YTAR+T Y+MP++KL
Sbjct: 122 LSISYLSTAPKNAEVIVDGSVVRSGRNITVVEQEFKLKKTGNLVYTARATFYHMPVSKL 178

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: gi|470142254|ref|XP_004306826.1| (PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 180.3 bits (456), Expect = 4.0e-42
Identity = 97/179 (54.19%), Postives = 128/179 (71.51%), Query Frame = 1


Query: 56  ATPSSSETPSLIFDSPTIQIKDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRG 115
           A PS+ ET S  F S     KD+ E  ++  ++ L     SG +PD CNTK FYS ++ G
Sbjct: 5   ANPSTIETES--FASTASISKDLPENHVKHLLQFLKLSGVSGPLPDHCNTKDFYSYLVLG 64

Query: 116 HLWQRRLERGRLTYLLSVKPAVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGE 175
            L    + RGR+T L+SVKPA SN +G  HGG +AA AE  + A ARTV+AEDKELFLGE
Sbjct: 65  ILKPLNIHRGRVTCLVSVKPAFSNFFGGFHGGAIAAVAEAVAFATARTVVAEDKELFLGE 124

Query: 176 LSISYLSGAPRNAEVIIDASILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           LSI+YLS AP+NAEVI D S++RSG++L V+A +F+L++TGKLIYTAR+T Y+ P++KL
Sbjct: 125 LSIAYLSSAPKNAEVIADGSVVRSGRNLTVIAQEFKLKETGKLIYTARATFYHTPVSKL 181

[Close]

BLAST of CmaCh14G020180 vs. NCBI nr
Match: gi|225453706|ref|XP_002270993.1| (PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera])

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 88/159 (55.35%), Postives = 115/159 (72.33%), Query Frame = 1


Query: 76  KDMSEEDLRGTIELLNGLSGSGQIPDDCNTKGFYSDIIRGHLWQRRLERGRLTYLLSVKP 135
           + + E  L  T+     +  +  +P +C  K FYS +IRG L  +R+ERG LT L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 136 AVSNRYGFLHGGFVAAAAEFSSIACARTVMAEDKELFLGELSISYLSGAPRNAEVIIDAS 195
           AV+N YG LHGG VA   E  SIACARTV+AEDKELFLGELS+SYLS AP  AEV+ DAS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 196 ILRSGKHLNVVAIDFRLQKTGKLIYTARSTLYNMPMAKL 235
           ++RSG+++ V+A++F+++KT KLIYT R+T YNMP+AKL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

The following BLAST results are available for this feature:

BLAST of CmaCh14G020180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh14G020180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3N5_CUCSA	4.7e-66	73.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1	[more]
D7U7H7_VITVI	8.1e-42	55.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=...	[more]
V4TXQ0_9ROSI	1.3e-39	52.20	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022587mg PE=4 SV=1	[more]
A0A067H2E8_CITSI	2.9e-39	51.57	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031046mg PE=4 SV=1	[more]
M5X5K0_PRUPE	1.9e-38	60.71	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019925mg PE=4 S...	[more]

BLAST of CmaCh14G020180 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61200.1	2.4e-24	34.22	Thioesterase superfamily protein	[more]
AT1G04290.1	5.6e-10	32.74	Thioesterase superfamily protein	[more]

BLAST of CmaCh14G020180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075319\|ref\|XP_008438081.1\|	9.8e-73	78.45	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]	[more]
gi\|449432177\|ref\|XP_004133876.1\|	6.8e-66	73.86	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus]	[more]
gi\|470142256\|ref\|XP_004306827.1\|	3.1e-42	53.63	PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca]	[more]
gi\|470142254\|ref\|XP_004306826.1\|	4.0e-42	54.19	PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp...	[more]
gi\|225453706\|ref\|XP_002270993.1\|	1.2e-41	55.35	PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006683	Thioestr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0047617	acyl-CoA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G020180.1	CmaCh14G020180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 141..217 score: 2.
None	No IPR available	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 76..234 score: 2.5
None	No IPR available	PANTHER	PTHR21660:SF12	SUBFAMILY NOT NAMED	coord: 76..234 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G020180	Cucsa.258150	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G020180	Cla021255	Watermelon (97103) v1	cmawmB242
CmaCh14G020180	Csa3G122640	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G020180	MELO3C006135	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G020180	ClCG05G001750	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G020180	CSPI03G09020	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G020180	CmoCh06G011250	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G020180	CmoCh14G020780	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G020180	Lsi05G020160	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G020180	Cp4.1LG03g16780	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G020180	Cp4.1LG08g01550	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G020180	MELO3C006135.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G020180	CsaV3_3G009140	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G020180	Cla97C05G082180	Watermelon (97103) v2	cmawmbB263
CmaCh14G020180	Bhi01G000280	Wax gourd	cmawgoB0332
CmaCh14G020180	CsGy3G009090	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G020180	Carg24951	Silver-seed gourd	carcmaB0918
CmaCh14G020180	Carg14795	Silver-seed gourd	carcmaB0874

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G020180	CmaCh06G010980	Cucurbita maxima (Rimu)	cmacmaB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G020180	Cucurbita pepo (Zucchini)	cmacpeB253
CmaCh14G020180	Cucurbita maxima (Rimu)	cmacmaB253
CmaCh14G020180	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh14G020180	Cucurbita moschata (Rifu)	cmacmoB255
CmaCh14G020180	Cucurbita moschata (Rifu)	cmacmoB260
CmaCh14G020180	Wild cucumber (PI 183967)	cmacpiB253
CmaCh14G020180	Cucumber (Chinese Long) v2	cmacuB250