CmaCh06G010980 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G010980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Thioesterase family protein
Location	Cma_Chr06 : 7425116 .. 7427729 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGATTGGTACGAAATCGAAGGGTAGTTGAGAGGAACGGCAATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGACGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACAAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGTCGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTTGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTAAGTTCTCAATTCTTTTTTCAAGTTTGTTTTCTCGTCGACTTTAGGAAGAGAATTTTGGTATTCGGTTTATACTATTGCGTATTCCTTGTGTCTGATTTGAATTGAAATGATATCTTCGGGGACTTGAAAAATTAGCTCTTCATCATTAGAGCGGAAATAGCTCAGAAAATGAGGTGTTTGGTTAGAATCGAAACAATATTTTTGAGAACTTGAAAGTTCACTATTCATCTATCGTTATAGTGATGTCTTTGGTTGCTGAGAAAATGCGGTATCTGATTTGAATTGAAATGATACACTTGGAAACTTTCAAATTTTCTGTTCATCATTATATTAATCTGTTTGCTTGCCGTGAAAATGTGGTGATTGATTTGAATCGGAACAGCTTCCACGGGAGCTTGAAAACAAAGCATTCATCATCATAGCGGTCTATTTGTTTGCCGAGAATGTGTGCCTTTTCAAATTCTAGTTATTTGCGTCTTTCAGTTTGAGTTCGTGTGGATTCATCTATCTGATGAATTAAAAACGGAATATCAATATGTTTTCATTCACATTAACAACAGGTATCTGTGAAATTTCAGAACATCTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTGTGGGAGAGAATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGTGAGTAAATTTTAAGTAATTGCTGTGCTCCCTTATGATTTGTTTGAGTTGGCGGTGCAAGTAGGTTAGTTAAGTTGAGGAAACTGACTATCGAATTGACCAAAACTGAGTCCAACCAATCAAAGCCATCAAAACTAACCAAAATTGAAATAAGCCACAGCCAACAAAGTTAAATGGATCAAGAATGAGAATTCAAATTGAATGAATTGAATTGGTTAATTCAGCTGGTTTTGGTAGTTTCGGTTTCAGGAGCTGGGAAGTGTTTGATGGAAACTCGATGTATAAATTTCTTAGATGTTAGAGTCCTCAGATTGTTTTGCTGGTCCTGCCTGCTTAAACCTTTTGTGTACTTAACCATACATGGGTGGGAGGGTTGCATGATTCTACCGGTGGAAATGGTTTATTACTTGAGACGACAGGGCCGTTTTATCTTCTTATGATTTGAAACTGATATTATGATGGTGTCTATTTTTTGTCGAATGGTATATTTCCATGGGTTTGCTGACTTTAGCTCACTTCCAGCCACCTTGCGCTTGTAGTTTATGGGAAAATACCATTCCTTTTCTTTATTAGGAGGATTAAGGGAGGTACATTCGTTCAAATCATGAATTTTCAAATTGAGAGATCAAGAATTAAATCATAATTACCACACTCTGCAATCCTATAGGTATAACATCAGTAATATGATTGCCACCACACTTCAGATCAGAGCAACAAATGGGACTGAGTTAGGTTGGATGTTTTAGGACACAAACATAGTAGTTTGGTACCATGTGAACAAGAAGGGTCTGAGTACATAACACAAATATAAATATAACTAGGTGCTATGACCAAGCCTTGAGTACATCAATGATTGCATCTAGTGTTCGATTCAGACTTCGGTACCGCTCAACTTATGGAGGATATGAAAGAGTATTTCGATTGCATTTTGTTGTTCAAAGATTGGTTTCGGCATTCACACCCAGGAAAGTAAGAACACACGCAAGAATAAACCATCGATACAATACAATGTGAAATTTGGTATTCGAGTCATTGTGAATTTAAATGCAGTTTTGATTGTTCAAGTAGCTTTCTTATGATTAAAAATCTTATCTTTACATACCTTTTCACTCAATTTGAGCTTTACCAAGATCATGCTATCTTCCACGACCGTAAACAGGACCTGTTCTCAAGAAGTTTTCTGAAAAATTGTGTTGTTACAGGCAGAGGTTGTGGTAGCTGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTTAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCAACTTTCTGTACTTTAATGTTCTGTGTTTTTATTCTGTTTGAACGAACATGTCAAATATATGTACTTGTGTAATGTTGAAAAGAGTAGGCAAATATATTGATTAGATGCTTGATTATCCTTGTATACTATTTATAATTTAGACAAAATACTGTTGTTCCATGCTATATTTATAAATTACATCAAATAGATGCCATCTTAGTTGGAGTTTGGATA

mRNA sequence

ATATGATTGGTACGAAATCGAAGGGTAGTTGAGAGGAACGGCAATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGACGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACAAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGTCGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTTGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCAACATCTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTGTGGGAGAGAATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGCTGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTTAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCAACTTTCTGTACTTTAATGTTCTGTGTTTTTATTCTGTTTGAACGAACATGTCAAATATATGTACTTGTGTAATGTTGAAAAGAGTAGGCAAATATATTGATTAGATGCTTGATTATCCTTGTATACTATTTATAATTTAGACAAAATACTGTTGTTCCATGCTATATTTATAAATTACATCAAATAGATGCCATCTTAGTTGGAGTTTGGATA

Coding sequence (CDS)

ATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGACGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACAAAACTATACAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGTCGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTTGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCAACATCTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTGTGGGAGAGAATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGCTGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTTAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAA

Protein sequence

MAKPSSPAASSLILESPTIQIKNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGELSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL

Homology

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BLAST of CmaCh06G010980 vs. TrEMBL
Match: A0A0A0L3N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.3e-60
Identity = 123/176 (69.89%), Postives = 144/176 (81.82%), Query Frame = 1


Query: 5   SSPAASSLILESPTIQIKNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISRSHLR 64
           SS    SLI  SPTIQIK+MSE++L  TIQM N L G   IP DC+T+ FYS I+  H+R
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 65  QLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGELSI 124
           QL  ERGR+TYLL VKP V+N+YGFLHGGFVA  AE  SIACARTVVGE+K LF+GELSI
Sbjct: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125

Query: 125 SYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           SYLSGAP+NAEV+V ASVLRSG+SL+++ +EF+LQKTGKLVYTAR TLY+MPM KL
Sbjct: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]

BLAST of CmaCh06G010980 vs. TrEMBL
Match: D7U7H7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.3e-35
Identity = 79/159 (49.69%), Postives = 108/159 (67.92%), Query Frame = 1


Query: 22  KNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKP 81
           + + E  L +T+     +     +P +C  + FYS + R  L+   +ERG +T L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 82  VVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGELSISYLSGAPQNAEVVVAAS 141
            V+N YG LHGG VA   E  SIACARTVV E+K LFLGELS+SYLS AP  AEVV  AS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 142 VLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           V+RSG+++T+I++EF+++KT KL+YT R+T Y+MP+ KL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

[Close]

BLAST of CmaCh06G010980 vs. TrEMBL
Match: G7LCQ0_MEDTR (Acyl-CoA thioesterase OS=Medicago truncatula GN=MTR_8g032450 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.4e-35
Identity = 80/179 (44.69%), Postives = 117/179 (65.36%), Query Frame = 1


Query: 2   AKPSSPAASSLILESPTIQIKNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISRS 61
           A  S+ A +S +  SP +  K++SE  L   +  +        +P +CNT+GF+    R+
Sbjct: 14  ASASAVAETSSVKISPEVDPKHVSETQLFVKLMGIGA-----PVPENCNTDGFFDSFLRN 73

Query: 62  HLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGE 121
            ++   ++RGRIT  ++ KP + N YG LHGG V +  E  S ACARTVV E+K LFLGE
Sbjct: 74  FIKVDQIQRGRITCTVVAKPPICNAYGTLHGGAVGSLVEVLSTACARTVVAEDKELFLGE 133

Query: 122 LSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           +SISYLSG P N EV   ASV++SG++LT++++EF+L+KTG LVY   +T Y+MP+ +L
Sbjct: 134 ISISYLSGTPINEEVEANASVVKSGRNLTVVALEFKLKKTGNLVYLTHATFYNMPVSRL 187

[Close]

BLAST of CmaCh06G010980 vs. TrEMBL
Match: A0A151TBD2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_018955 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-34
Identity = 75/157 (47.77%), Postives = 108/157 (68.79%), Query Frame = 1


Query: 24  MSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKPVV 83
           M  +++ +T   L  L  +  IP  C T GFYS    S +R   ++RGRI+  + VKP +
Sbjct: 1   MDPQNVSRTHTFLKSLGMYKPIPQSCETSGFYSHFFGSFIRVNDIKRGRISCTIAVKPSI 60

Query: 84  SNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGELSISYLSGAPQNAEVVVAASVL 143
           SN +G LHGG V +  E  SIACARTVV E+K LFLGE+++SYLSGAP N EV+  ASV+
Sbjct: 61  SNYFGTLHGGSVGSLIELMSIACARTVVAEDKELFLGEMNVSYLSGAPTNTEVLAEASVV 120

Query: 144 RSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           +SG+++T++S+EF+L+ TG L+Y A +T Y++ + KL
Sbjct: 121 KSGRNVTMVSLEFKLKNTGNLIYIAHTTFYNITVAKL 157

[Close]

BLAST of CmaCh06G010980 vs. TrEMBL
Match: I3S8B6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-34
Identity = 80/180 (44.44%), Postives = 116/180 (64.44%), Query Frame = 1


Query: 2   AKPSSPAASSLILESPTIQIKN-MSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISR 61
           AKPSS   S+    SP+++I + +      +T+  +  + G V IP +CNT GFY    R
Sbjct: 3   AKPSSGTESASSCASPSLKISSELDPRHASETLTFVTRMGGGVSIPQNCNTNGFYDAFIR 62

Query: 62  SHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLG 121
           S ++   ++RGRI+  +I KP + N YG LHGG V    E  S ACARTVV E+K L LG
Sbjct: 63  SFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVLSTACARTVVAEDKQLSLG 122

Query: 122 ELSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           E+SISYLSG P N EV+  ASV+++G++LT++++EF+ +K G L+Y   +T Y+MP+  L
Sbjct: 123 EVSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHATFYNMPVSGL 182

[Close]

BLAST of CmaCh06G010980 vs. TAIR10
Match: AT3G61200.1 (AT3G61200.1 Thioesterase superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 55/126 (43.65%), Postives = 95/126 (75.40%), Query Frame = 1


Query: 55  YSDISRSHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGEN 114
           +S + +++ R LS+ RGR++  + V P +SN +  LHGG VA+ AE  ++AC +TVV E+
Sbjct: 63  FSVLFQNNTRALSIARGRVSCSVTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSED 122

Query: 115 KALFLGELSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYS 174
           K LF+GELS+SYLS AP ++E++V  +V+R+G++L+++++EF++++T K+ Y +R+T Y 
Sbjct: 123 KHLFIGELSMSYLSSAPISSELLVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYH 182

Query: 175 MPMPKL 181
            P+ KL
Sbjct: 183 SPISKL 188

[Close]

BLAST of CmaCh06G010980 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09
Identity = 35/113 (30.97%), Postives = 58/113 (51.33%), Query Frame = 1


Query: 68  LERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGELSISYL 127
           +E GRI   + + P + N   FLHGG  A   +    A   T    +  + + E+++SYL
Sbjct: 44  IEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSV-EINVSYL 103

Query: 128 SGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
             A  + E+ + +  LR GK++ ++S+E R + TGK++   R T Y  P   L
Sbjct: 104 DAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

[Close]

BLAST of CmaCh06G010980 vs. NCBI nr
Match: gi|659075319|ref|XP_008438081.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 2.1e-67
Identity = 138/184 (75.00%), Postives = 158/184 (85.87%), Query Frame = 1


Query: 1   MAKPSSPAASS----LILESPTIQIKNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYS 60
           MAK SS ++SS    LI +SPTIQIK +SEEDL +TIQM NGL G  QIP DC+T+ FYS
Sbjct: 1   MAKSSSSSSSSEIPSLIFQSPTIQIKGISEEDLRETIQMFNGLTGSGQIPDDCDTKAFYS 60

Query: 61  DISRSHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKA 120
            I+R HLRQL  ERGR+TYLL VKP VSNIYG+LHGGFVAAAAEF SIACARTVVGE+K 
Sbjct: 61  HITRGHLRQLRRERGRLTYLLCVKPAVSNIYGYLHGGFVAAAAEFLSIACARTVVGEDKK 120

Query: 121 LFLGELSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMP 180
           LF+GELSISYLSGAP+NAEVVV ASVLRSG+SL+++ +EF+LQKTGKLVYTARSTLY+MP
Sbjct: 121 LFIGELSISYLSGAPENAEVVVDASVLRSGRSLSVVEVEFKLQKTGKLVYTARSTLYNMP 180

[Close]

BLAST of CmaCh06G010980 vs. NCBI nr
Match: gi|449432177|ref|XP_004133876.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.3e-60
Identity = 123/176 (69.89%), Postives = 144/176 (81.82%), Query Frame = 1


Query: 5   SSPAASSLILESPTIQIKNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISRSHLR 64
           SS    SLI  SPTIQIK+MSE++L  TIQM N L G   IP DC+T+ FYS I+  H+R
Sbjct: 6   SSSPIPSLIFVSPTIQIKDMSEQNLIGTIQMFNELTGSGAIPDDCDTKAFYSHITNGHVR 65

Query: 65  QLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGELSI 124
           QL  ERGR+TYLL VKP V+N+YGFLHGGFVA  AE  SIACARTVVGE+K LF+GELSI
Sbjct: 66  QLHRERGRLTYLLCVKPAVANVYGFLHGGFVATVAELVSIACARTVVGEDKKLFIGELSI 125

Query: 125 SYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           SYLSGAP+NAEV+V ASVLRSG+SL+++ +EF+LQKTGKLVYTAR TLY+MPM KL
Sbjct: 126 SYLSGAPENAEVIVEASVLRSGRSLSVVEVEFKLQKTGKLVYTARFTLYNMPMAKL 181

[Close]

BLAST of CmaCh06G010980 vs. NCBI nr
Match: gi|470142256|ref|XP_004306827.1| (PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca])

HSP 1 Score: 164.1 bits (414), Expect = 2.3e-37
Identity = 90/180 (50.00%), Postives = 126/180 (70.00%), Query Frame = 1


Query: 1   MAKPSSPAASSLILESPTIQIKNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISR 60
           MAKPS     S   ++ TI  +++ EE L++ ++ L  +     +P  CNTE FYS+I  
Sbjct: 1   MAKPSIALTESFASKA-TIS-EDIPEEYLNRLLKFLERVGISGDVPDHCNTEDFYSNIIG 60

Query: 61  SHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLG 120
             L+ L++ RGR+T L+ VKP V+N +G  HGG +A+ AE  + A ART+V E+K LFLG
Sbjct: 61  GFLKHLAILRGRVTCLVSVKPAVTNTFGGFHGGAIASVAEAVAFATARTIVAEDKELFLG 120

Query: 121 ELSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 180
           ELSISYLS AP+NAEV+V  SV+RSG+++T++  EF+L+KTG LVYTAR+T Y MP+ KL
Sbjct: 121 ELSISYLSTAPKNAEVIVDGSVVRSGRNITVVEQEFKLKKTGNLVYTARATFYHMPVSKL 178

[Close]

BLAST of CmaCh06G010980 vs. NCBI nr
Match: gi|225453704|ref|XP_002270956.1| (PREDICTED: uncharacterized protein LOC100259154 [Vitis vinifera])

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-35
Identity = 81/136 (59.56%), Postives = 105/136 (77.21%), Query Frame = 1


Query: 45  IPVDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKPVVSNIYGFLHGGFVAAAAEFSSI 104
           +  DC  + FYS +  S L   S+ERGRIT L+ VKP V N +G LHGG VAA AE  SI
Sbjct: 43  VAADCLRKDFYSRLILSLLEVDSVERGRITCLVSVKPAVINYFGGLHGGAVAAIAELVSI 102

Query: 105 ACARTVVGENKALFLGELSISYLSGAPQNAEVVVAASVLRSGKSLTIISIEFRLQKTGKL 164
           ACARTVV E+K LFLGEL +SYLS AP+NAE+ V ASV+RSG+++T+I++EF++++T +L
Sbjct: 103 ACARTVVAEDKELFLGELGMSYLSAAPKNAELTVDASVVRSGRNVTVIAVEFKMRETSQL 162

Query: 165 VYTARSTLYSMPMPKL 181
           VYTAR+T Y+MPM KL
Sbjct: 163 VYTARATFYNMPMAKL 178

[Close]

BLAST of CmaCh06G010980 vs. NCBI nr
Match: gi|225453706|ref|XP_002270993.1| (PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera])

HSP 1 Score: 156.0 bits (393), Expect = 6.2e-35
Identity = 79/159 (49.69%), Postives = 108/159 (67.92%), Query Frame = 1


Query: 22  KNMSEEDLHKTIQMLNGLRGFVQIPVDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKP 81
           + + E  L +T+     +     +P +C  + FYS + R  L+   +ERG +T L  V P
Sbjct: 18  RQIPEAHLSRTLGFFQHIGVTADLPPNCQEKDFYSHLIRGILQVQRVERGHLTCLFCVVP 77

Query: 82  VVSNIYGFLHGGFVAAAAEFSSIACARTVVGENKALFLGELSISYLSGAPQNAEVVVAAS 141
            V+N YG LHGG VA   E  SIACARTVV E+K LFLGELS+SYLS AP  AEVV  AS
Sbjct: 78  AVANYYGGLHGGAVAIIVELVSIACARTVVAEDKELFLGELSMSYLSAAPAKAEVVTDAS 137

Query: 142 VLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL 181
           V+RSG+++T+I++EF+++KT KL+YT R+T Y+MP+ KL
Sbjct: 138 VVRSGRNVTVIAVEFKMKKTSKLIYTGRATFYNMPIAKL 176

The following BLAST results are available for this feature:

BLAST of CmaCh06G010980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh06G010980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3N5_CUCSA	2.3e-60	69.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1	[more]
D7U7H7_VITVI	4.3e-35	49.69	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=...	[more]
G7LCQ0_MEDTR	7.4e-35	44.69	Acyl-CoA thioesterase OS=Medicago truncatula GN=MTR_8g032450 PE=2 SV=1	[more]
A0A151TBD2_CAJCA	2.2e-34	47.77	Uncharacterized protein OS=Cajanus cajan GN=KK1_018955 PE=4 SV=1	[more]
I3S8B6_LOTJA	4.8e-34	44.44	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of CmaCh06G010980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61200.1	1.5e-26	43.65	Thioesterase superfamily protein	[more]
AT1G04290.1	1.6e-09	30.97	Thioesterase superfamily protein	[more]

BLAST of CmaCh06G010980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075319\|ref\|XP_008438081.1\|	2.1e-67	75.00	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]	[more]
gi\|449432177\|ref\|XP_004133876.1\|	3.3e-60	69.89	PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus]	[more]
gi\|470142256\|ref\|XP_004306827.1\|	2.3e-37	50.00	PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca]	[more]
gi\|225453704\|ref\|XP_002270956.1\|	2.1e-35	59.56	PREDICTED: uncharacterized protein LOC100259154 [Vitis vinifera]	[more]
gi\|225453706\|ref\|XP_002270993.1\|	6.2e-35	49.69	PREDICTED: uncharacterized protein LOC100254026 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006683	Thioestr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0047617	acyl-CoA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G010980.1	CmaCh06G010980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 87..163 score: 4.1
None	No IPR available	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 8..180 score: 1.3
None	No IPR available	PANTHER	PTHR21660:SF12	SUBFAMILY NOT NAMED	coord: 8..180 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G010980	Cucsa.258150	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G010980	Cla021255	Watermelon (97103) v1	cmawmB798
CmaCh06G010980	Csa3G122640	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G010980	MELO3C006135	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G010980	ClCG05G001750	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G010980	CSPI03G09020	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G010980	CmoCh06G011250	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G010980	CmoCh14G020780	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G010980	Lsi05G020160	Bottle gourd (USVL1VR-Ls)	cmalsiB764
CmaCh06G010980	Cp4.1LG03g16780	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G010980	Cp4.1LG08g01550	Cucurbita pepo (Zucchini)	cmacpeB854
CmaCh06G010980	MELO3C006135.2	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G010980	CsaV3_3G009140	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G010980	Cla97C05G082180	Watermelon (97103) v2	cmawmbB856
CmaCh06G010980	Bhi01G000280	Wax gourd	cmawgoB1009
CmaCh06G010980	CsGy3G009090	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G010980	Carg24951	Silver-seed gourd	carcmaB0919
CmaCh06G010980	Carg14795	Silver-seed gourd	carcmaB0877

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G010980	CmaCh14G020180	Cucurbita maxima (Rimu)	cmacmaB285

The following block(s) are covering this gene:

None