Cp4.1LG08g01550.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATACGTACAAATTTCTCGCAAATGTTTGGTAAATTATCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATCCAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTAAGTTCTCAATTCTTTTTTTCAAGTTTGTTTTCTCGTCGACTTTAGGAAGAGAATTTTGGTATTCGGTTTATACTATTGCGTATTCCTTGTATCTGATTTGAATTGAATTGATATCTTTGGGGACTTGAAAAATTAGCTATTCATCATTAGAGCGGAAATAGCTCAGAAAATGAGGTGTTTGGTTAGAATCGAAACAATATTTTTGAGAACTTGAAAGTTCACTATTCATCTATCGTTATAGTGATGTCTTTGGTTGCTGAGAAAATGAAGTATCTGATTTGAATTGAGATGATACATTTGGAAACTTTCAAATTTTCTGTTCATCGTTATACTAATCTGTTTGCTCGCCGTGAAAATGTGGTGATTGATTTGAATCGGAACAGCTTCCACGGGAACTTGAAAACAAAGCATTCATCATCATGGCGGTCTATTTGTTTGCCGAGAATGTGTGCCTTTTCAAATTCTCGTTATTTGCGTCTTTCAGTTTGAGTTCGTGTGGATTCATCTATCTGATGAATTAAAAACGGAATATCAATATGTTTGCATTCACATTAACAACAGGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGTGAGTAAATTTTAAGTAATTGCTGTGCTTCCTTATGATTTGTTTGAGTTGGGGGGTGCAAGTAGGTTAGTTAAGCTGAGGAAACTGACTCTCGAATTGACCAAAACTGAGTCCAACCAATCAAAGCCATCAAAACTAACCAAAATTGAAATAAGCCACATCCAACAAAGTCAAATGGATCAAGAATGAGAATTCAAATTGAATGAATTGAATTGGTTAATTCAGCCGGTTTTGGCAATTTCGGTTTCGGGAGCTGGGACGTGTTTTGATGGAAACTGGATGTATAAATTTCTTAGACGTTAGAGTCCTCAGATTGTTTTGCTGGTCCTGCATGCTTAAACCTTTTGTGTACCTAGCCATACATGGGTGGGAGGGTTGCATGATTCTACCGGTGGCAATGGTTTATAACTTGAGACAGGGCCATTTTATCTTCTTATGATTTGAAACTGATATTATGATGGTGTCTATTTTTTGTCGAATGGTATATTTCCATGGCTTTGCTGACTTTAGCTCAGTTCCAGCCACCTTGCGCTTGTAGTTTATGGGAAAATACCATTCATTTTCTTTATTAGGAGGATTAAGGGAGATACATTCATTCAAATCATGAATTTTCAAATAGAGAGATCAAGAATTAAATCATAATTACCACCCTCTGCAATCCTATAGGTATAACATCAGTAATATGATTGCCACCACACTTCAGATCAGAGCAACAAATGGGACTGAGTTAGGTTGGATGTTTTAGGACACAAACATAGTAGTTAGGTACCATGTGAACAAGAAGGGTCTGAGTACATAACACAAATATAAATATAACTAGGTGCTATGACCAAGCCTCGAGTACATCAATGATTGCATCTAGTGTTCGATTCAGACTTCGGTACCGATCAACTTATGGAGGATATGAAAGATGGTATTTCGATCGATTTTGTTGTTCAAAGAATGGTTTCGGCATTCACATCCAGGAAAGTATGAACACACACAAGAAAAAACCATCGATACAATACAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGCAGGGGTGCGTTGGTATCGTATATATATAAAAGGCTACCTGTTGGTTTCACAATTCCATTGCCTTAACTACTTCCTGAACCTTTTAGTCTCTCCTGTAAAGAAAGGATAGGGGAAGGATTTCATATGCGAGTTAAGGAGAATGAAGAAAGGATAGCTTGTGACCTTCTTTCAAAATCGAAGTACAGTGATCTGCTTTAACCGCTGAATGACTTCCAATTGGTATTTGAGTCATACTTGTGAATTTAAATGCAGTTTTGATTGTTCAAGTAGCTTGCTTATGATTAAAAATCTTAGCTCTACATACCTTTTCACTCAATTTGAGCTTTACCAAGATCATGCTATCTTCCACGACCTTACTTAAACAGGACCTGTTCTTTAGAAGTTTTCTGAAAAATTGTGTTGTTGCAGGCAGAGGTTGTGGTAGACGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTATGTGCTTTTATTCTGTTTGAACAAACATGTCAAATATTTGTACTTGTGTAATGTTGAAAAGAGTAGGCAAATATATTGATTAGAAGCTTGATTATCCTTGTATACTATTTATAATCTAGACAAAATACTGTTGTTCCATGCTGTATTCATAAAGAAATCTTAGTTGCTATAGAGTTTGGACTTCAAGATACTCGA ATACGTACAAATTTCTCGCAAATGTTTGGTAAATTATCGCAGTTGTATATGATTGGTACGAAATCGAACGGTAGTTGAGAGGAACGACAATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATCCAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGACGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAAAATGAAAATTTCCAGGTGCCTAAACATCTCCCAACTTTCTTTACTTTAATGTTATGTGCTTTTATTCTGTTTGAACAAACATGTCAAATATTTGTACTTGTGTAATGTTGAAAAGAGTAGGCAAATATATTGATTAGAAGCTTGATTATCCTTGTATACTATTTATAATCTAGACAAAATACTGTTGTTCCATGCTGTATTCATAAAGAAATCTTAGTTGCTATAGAGTTTGGACTTCAAGATACTCGA ATGGCGAAACCTTCTTCACCAGCAGCTTCTTCGTTGATCTTAGAGTCGCCGGCGATTCAGATAAAGAATATGTCTGAAGAAGATTTGCACGAAACTATCCAAATGCTCAATGGATTGAGAGGCTTCGTCCAAATTCCGGACGATTGCAACACCGAGGGCTTCTATTCCGACATCAGTCGCAGTCATCTCCGGCAGCTCAGCCTCGAACGAGGCCGTATCACCTACCTCCTCATCGTCAAACCTGTTGTCTCCGTATCTGTGAAATTTCAGAACATTTATGGCTTTTTACATGGAGGATTTGTTGCTGCGGCTGCTGAGTTCTCATCAATTGCTTGTGCTAGAACTGTTCTGGGAGAGGATAAGGCATTATTTCTTGGGGAACTGAGCATTTCTTATCTCTCAGGCGCTCCACAAAATGCAGAGGTTGTGGTAGACGCTTCTGTTTTAAGGAGTGGAAAAAGTTTGACCATAATTTCCATAGAGTTCAGACTTCAAAAGACAGGAAAGTTGGTCTACACAGCTCGCTCTACACTCTATAGCATGCCAATGCCGAAGTTATAA MAKPSSPAASSLILESPAIQIKNMSEEDLHETIQMLNGLRGFVQIPDDCNTEGFYSDISRSHLRQLSLERGRITYLLIVKPVVSVSVKFQNIYGFLHGGFVAAAAEFSSIACARTVLGEDKALFLGELSISYLSGAPQNAEVVVDASVLRSGKSLTIISIEFRLQKTGKLVYTARSTLYSMPMPKL
BLAST of Cp4.1LG08g01550.1 vs. TrEMBL
Match: A0A0A0L3N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122640 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.6e-59 Identity = 123/182 (67.58%), Postives = 145/182 (79.67%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. TrEMBL
Match: D7U7H7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02100 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.8e-34 Identity = 80/165 (48.48%), Postives = 108/165 (65.45%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. TrEMBL
Match: G7LCQ0_MEDTR (Acyl-CoA thioesterase OS=Medicago truncatula GN=MTR_8g032450 PE=2 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 8.5e-34 Identity = 80/185 (43.24%), Postives = 119/185 (64.32%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. TrEMBL
Match: I3S8B6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 3.2e-33 Identity = 81/186 (43.55%), Postives = 117/186 (62.90%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. TrEMBL
Match: A0A151TBD2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_018955 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 5.5e-33 Identity = 75/163 (46.01%), Postives = 108/163 (66.26%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. TAIR10
Match: AT3G61200.1 (AT3G61200.1 Thioesterase superfamily protein) HSP 1 Score: 112.1 bits (279), Expect = 3.8e-25 Identity = 55/132 (41.67%), Postives = 96/132 (72.73%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. TAIR10
Match: AT1G04290.1 (AT1G04290.1 Thioesterase superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 7.1e-08 Identity = 35/119 (29.41%), Postives = 57/119 (47.90%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. NCBI nr
Match: gi|659075319|ref|XP_008438081.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 2.2e-67 Identity = 140/190 (73.68%), Postives = 159/190 (83.68%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. NCBI nr
Match: gi|449432177|ref|XP_004133876.1| (PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis sativus]) HSP 1 Score: 236.5 bits (602), Expect = 3.8e-59 Identity = 123/182 (67.58%), Postives = 145/182 (79.67%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. NCBI nr
Match: gi|470142256|ref|XP_004306827.1| (PREDICTED: uncharacterized protein LOC101315085 [Fragaria vesca subsp. vesca]) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37 Identity = 92/186 (49.46%), Postives = 125/186 (67.20%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. NCBI nr
Match: gi|470142252|ref|XP_004306825.1| (PREDICTED: uncharacterized protein LOC101314599 isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 159.5 bits (402), Expect = 5.8e-36 Identity = 92/192 (47.92%), Postives = 127/192 (66.15%), Query Frame = 1
BLAST of Cp4.1LG08g01550.1 vs. NCBI nr
Match: gi|470142254|ref|XP_004306826.1| (PREDICTED: uncharacterized protein LOC101314599 isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 157.9 bits (398), Expect = 1.7e-35 Identity = 91/188 (48.40%), Postives = 124/188 (65.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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