Cp4.1LG01g22210 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g22210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 20340942 .. 20341145 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATAGCTCGCAACAGATGAGCTTTCAGGCTGGAGAGGCGAAGGGCCAAGCTAAGGAGAAGACAAGCAATTTGATTGAGAAAGCTAGCAATGCAGCTCAATCAGCGAAAGAGACCGTGCAAGAGGCAGGCCAACAGATGGTGGCTAAGGCTCAAGGAGCCGCCGAGGCTGTGAAGGATGCCACCGGATTGAACAAATGA

mRNA sequence

ATGGCGGATAGCTCGCAACAGATGAGCTTTCAGGCTGGAGAGGCGAAGGGCCAAGCTAAGGAGAAGACAAGCAATTTGATTGAGAAAGCTAGCAATGCAGCTCAATCAGCGAAAGAGACCGTGCAAGAGGCAGGCCAACAGATGGTGGCTAAGGCTCAAGGAGCCGCCGAGGCTGTGAAGGATGCCACCGGATTGAACAAATGA

Coding sequence (CDS)

ATGGCGGATAGCTCGCAACAGATGAGCTTTCAGGCTGGAGAGGCGAAGGGCCAAGCTAAGGAGAAGACAAGCAATTTGATTGAGAAAGCTAGCAATGCAGCTCAATCAGCGAAAGAGACCGTGCAAGAGGCAGGCCAACAGATGGTGGCTAAGGCTCAAGGAGCCGCCGAGGCTGTGAAGGATGCCACCGGATTGAACAAATGA

Protein sequence

MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVKDATGLNK
Homology
[Close]
BLAST of Cp4.1LG01g22210 vs. TrEMBL
Match: A0A0A0KVV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643260 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-18
Identity = 53/67 (79.10%), Postives = 64/67 (95.52%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MADSSQ+MS+QAGEAKGQ +EK SNL++ A+NAAQSAKET+QEAGQQ++AKAQGAAEA+K
Sbjct: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60

Query: 61 DATGLNK 68
          DATG+NK
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. TrEMBL
Match: A0A0A0KPD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-17
Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MAD+SQ MS+Q GEAKGQA+EK SN++EKAS+AAQSAKE++QE GQQM AKAQGAA+AVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGLNK 68
          DATG+NK
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. TrEMBL
Match: W9RDZ1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009672 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.2e-16
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MADSS+++S+ AGEAKGQA EK SN+++KASN AQSAKE+VQEAGQQM AKAQGA EAVK
Sbjct: 1  MADSSEKISYHAGEAKGQANEKASNILDKASNTAQSAKESVQEAGQQMKAKAQGATEAVK 60

Query: 61 DATGLNK 68
          +ATG+NK
Sbjct: 61 NATGINK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. TrEMBL
Match: A0A0A0KRE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-15
Identity = 49/67 (73.13%), Postives = 61/67 (91.04%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MAD+S++MS+  GEAKGQA+EK SNL++KA + AQSAKE++QEAGQQM AKAQGAA+AVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGLNK 68
          DATG+NK
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. TrEMBL
Match: B9H3T9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s10750g PE=4 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-15
Identity = 48/67 (71.64%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MAD++Q+MS+QAGE KGQA+EK SNL+++A NAAQSAKE+VQEAGQQ+ AK QGA E VK
Sbjct: 1  MADNTQKMSYQAGETKGQAQEKASNLMDRADNAAQSAKESVQEAGQQVRAKTQGAVEGVK 60

Query: 61 DATGLNK 68
          +ATG+NK
Sbjct: 61 NATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. TAIR10
Match: AT5G53820.1 (AT5G53820.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-16
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          M+++SQ MSF AG+AKGQ +EK SNLI+KASNAAQSAKE++QE GQQ+  KAQGA+E +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGLNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. TAIR10
Match: AT5G38760.1 (AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 79.3 bits (194), Expect = 9.7e-16
Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          M+ +SQ +SFQAG+AKGQ +EK S +++KASNAAQSAKE+++E GQQ+  KAQGA E+VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGLNK 68
          +ATG+NK
Sbjct: 61 NATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. TAIR10
Match: AT3G02480.1 (AT3G02480.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 67.0 bits (162), Expect = 5.0e-12
Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 1 

Query: 3  DSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVKDA 62
          D+ Q  S+QAG+A GQ KEK   +++KA +AA SA++++Q+ GQQM  KAQGAA+ VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGLNK 68
          TG+NK
Sbjct: 62 TGMNK 66

[Close]
BLAST of Cp4.1LG01g22210 vs. TAIR10
Match: AT5G15970.1 (AT5G15970.1 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6))

HSP 1 Score: 47.0 bits (110), Expect = 5.4e-06
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 1 

Query: 9  SFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVKDATGLNK 68
          +FQAG+A G+A+EK++ L++KA +AA +A  + Q+AG+ +   A G    VKD TGLNK
Sbjct: 8  AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLNK 66

[Close]
BLAST of Cp4.1LG01g22210 vs. NCBI nr
Match: gi|659119050|ref|XP_008459448.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-19
Identity = 56/67 (83.58%), Postives = 66/67 (98.51%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MADSSQ+MS+QAGEAKGQA+EK SNL++KASNAAQSAKET+QEAGQQM+AKAQGAA+A+K
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DATGLNK 68
          DATG+NK
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. NCBI nr
Match: gi|449447460|ref|XP_004141486.1| (PREDICTED: late embryogenesis abundant protein 2-like [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 4.4e-18
Identity = 53/67 (79.10%), Postives = 64/67 (95.52%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MADSSQ+MS+QAGEAKGQ +EK SNL++ A+NAAQSAKET+QEAGQQ++AKAQGAAEA+K
Sbjct: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60

Query: 61 DATGLNK 68
          DATG+NK
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. NCBI nr
Match: gi|449469355|ref|XP_004152386.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 6.4e-17
Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MAD+SQ MS+Q GEAKGQA+EK SN++EKAS+AAQSAKE++QE GQQM AKAQGAA+AVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGLNK 68
          DATG+NK
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. NCBI nr
Match: gi|703115476|ref|XP_010100902.1| (hypothetical protein L484_009672 [Morus notabilis])

HSP 1 Score: 92.4 bits (228), Expect = 3.2e-16
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MADSS+++S+ AGEAKGQA EK SN+++KASN AQSAKE+VQEAGQQM AKAQGA EAVK
Sbjct: 1  MADSSEKISYHAGEAKGQANEKASNILDKASNTAQSAKESVQEAGQQMKAKAQGATEAVK 60

Query: 61 DATGLNK 68
          +ATG+NK
Sbjct: 61 NATGINK 67

[Close]
BLAST of Cp4.1LG01g22210 vs. NCBI nr
Match: gi|658013078|ref|XP_008341834.1| (PREDICTED: stress-induced protein KIN2-like [Malus domestica])

HSP 1 Score: 91.7 bits (226), Expect = 5.4e-16
Identity = 50/67 (74.63%), Postives = 63/67 (94.03%), Query Frame = 1 

Query: 1  MADSSQQMSFQAGEAKGQAKEKTSNLIEKASNAAQSAKETVQEAGQQMVAKAQGAAEAVK 60
          MAD+SQ+MS+QAGEAKGQA+EK S +++KA+NAAQSAKET+Q+AGQ M AKAQGAA+AVK
Sbjct: 1  MADNSQKMSYQAGEAKGQAQEKASGMMDKANNAAQSAKETMQDAGQNMQAKAQGAADAVK 60

Query: 61 DATGLNK 68
          +ATG+NK
Sbjct: 61 NATGMNK 67

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g22210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVV6_CUCSA3.1e-1879.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643260 PE=4 SV=1[more]
A0A0A0KPD4_CUCSA4.4e-1777.61Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1[more]
W9RDZ1_9ROSA2.2e-1676.12Uncharacterized protein OS=Morus notabilis GN=L484_009672 PE=4 SV=1[more]
A0A0A0KRE1_CUCSA1.9e-1573.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1[more]
B9H3T9_POPTR5.4e-1571.64Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s10750g PE=4 SV=2[more]
BLAST of Cp4.1LG01g22210 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53820.11.2e-1665.67 Late embryogenesis abundant protein (LEA) family protein[more]
AT5G38760.19.7e-1664.18 Late embryogenesis abundant protein (LEA) family protein[more]
AT3G02480.15.0e-1255.38 Late embryogenesis abundant protein (LEA) family protein[more]
AT5G15970.15.4e-0647.46 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / c... [more]
BLAST of Cp4.1LG01g22210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119050|ref|XP_008459448.1|1.4e-1983.58PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
gi|449447460|ref|XP_004141486.1|4.4e-1879.10PREDICTED: late embryogenesis abundant protein 2-like [Cucumis sativus][more]
gi|449469355|ref|XP_004152386.1|6.4e-1777.61PREDICTED: stress-induced protein KIN2-like [Cucumis sativus][more]
gi|703115476|ref|XP_010100902.1|3.2e-1676.12hypothetical protein L484_009672 [Morus notabilis][more]
gi|658013078|ref|XP_008341834.1|5.4e-1674.63PREDICTED: stress-induced protein KIN2-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22210.1Cp4.1LG01g22210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 20..47
scor
NoneNo IPR availablePANTHERPTHR34191FAMILY NOT NAMEDcoord: 2..67
score: 3.5
NoneNo IPR availablePANTHERPTHR34191:SF2STRESS-INDUCED PROTEIN KIN1-RELATEDcoord: 2..67
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g22210Cucsa.238340Cucumber (Gy14) v1cgycpeB0628
Cp4.1LG01g22210CmaCh15G002020Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g22210CmoCh04G029610Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g22210CmoCh15G002150Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g22210Cla016476Watermelon (97103) v1cpewmB462
Cp4.1LG01g22210Csa5G643250Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g22210MELO3C022080Melon (DHL92) v3.5.1cpemeB348
Cp4.1LG01g22210CSPI05G29750Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g22210Lsi03G002040Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g22210MELO3C022081.2Melon (DHL92) v3.6.1cpemedB408
Cp4.1LG01g22210CsaV3_5G038860Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g22210Bhi06G000224Wax gourdcpewgoB0502
Cp4.1LG01g22210Bhi06G000050Wax gourdcpewgoB0501
Cp4.1LG01g22210CsGy5G029170Cucumber (Gy14) v2cgybcpeB625
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g22210Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g22210Silver-seed gourdcarcpeB0034
Cp4.1LG01g22210Silver-seed gourdcarcpeB0374
Cp4.1LG01g22210Silver-seed gourdcarcpeB0892
Cp4.1LG01g22210Cucumber (Chinese Long) v3cpecucB0472
Cp4.1LG01g22210Cucumber (Chinese Long) v3cpecucB0509
Cp4.1LG01g22210Wax gourdcpewgoB0546
Cp4.1LG01g22210Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG01g22210Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g22210Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g22210Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g22210Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g22210Cucumber (Gy14) v2cgybcpeB514