CsaV3_5G038860 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G038860
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 30773600 .. 30774274 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAAACAACTTTAGAAGAATCATATATTCACAAATTGATCTAATTCCTTATTCTAAACTTTCTCTTTCACAATGGCAGACAATAACTCTAACAAGATGAGCTTTCAAGCTGGAGAAGCCAAGGGCCAAGCTCAGGTTTTCGTCTATTCTATATCTTTTTTTATTTTTAAAACATTTATTAAAAGTATAATGAGTATGATGTTGGTGGGTTGTATTGTTAATTATATAGGAGAAGGCTAGCAATTTGATGGATAAGGCGAGTAATGCAGCGGAATCGGCTAAAGAGTCCATTCAAGAGACAGGCCAACAGATGATGGCTAAGGCTCAAGGTGCTGCTGATGCTGCCAAAGATGCTGTCAACAAATAAAACCATATATCAATCATCCTTATTATTGATATTTGATCAATTAATTATGAGTTTTACTTTTCGAGTTTGGGATTTGTTTGGTTACTCCTTTTCTTAGGGGGGTTTTTCAAAGATGTCAAATAAATTCCTATTGGAATTTCTTTTCATTTTCAACTTTCATTTATACATGAATATATTTTCTTAGATCATATTCAAAGTAATTGTTGCTAAATAATGATTATAGATTTAATTATGTCTATCTAAATCCAAGATCATAGTGCCATTTTTTTTTAAAGAAATATTATCAATTTTCAATTACTTTTAATTTA

mRNA sequence

ATGGCAGACAATAACTCTAACAAGATGAGCTTTCAAGCTGGAGAAGCCAAGGGCCAAGCTCAGGAGAAGGCTAGCAATTTGATGGATAAGGCGAGTAATGCAGCGGAATCGGCTAAAGAGTCCATTCAAGAGACAGGCCAACAGATGATGGCTAAGGCTCAAGGTGCTGCTGATGCTGCCAAAGATGCTGTCAACAAATAA

Coding sequence (CDS)

ATGGCAGACAATAACTCTAACAAGATGAGCTTTCAAGCTGGAGAAGCCAAGGGCCAAGCTCAGGAGAAGGCTAGCAATTTGATGGATAAGGCGAGTAATGCAGCGGAATCGGCTAAAGAGTCCATTCAAGAGACAGGCCAACAGATGATGGCTAAGGCTCAAGGTGCTGCTGATGCTGCCAAAGATGCTGTCAACAAATAA

Protein sequence

MADNNSNKMSFQAGEAKGQAQEKASNLMDKASNAAESAKESIQETGQQMMAKAQGAADAAKDAVNK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G038860.1CsaV3_5G038860.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availablePANTHERPTHR34191FAMILY NOT NAMEDcoord: 1..64
NoneNo IPR availablePANTHERPTHR34191:SF5ABA-INDUCIBLE PROTEIN-LIKE-RELATEDcoord: 1..64

The following gene(s) are paralogous to this gene:

None