Cla016476 (gene) Watermelon (97103) v1

Overview
NameCla016476
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionABA-inducible protein-like protein (AHRD V1 **-- Q8LCW4_ARATH)
LocationChr11 : 21754144 .. 21754640 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAACTCCCAAAAGTTGAGCTATCATGCCGGGGAAGCCAAGGGTCAAGCTCAGGTTCACTTAGTCATTATTATTTAAATTTAACTATGTCATCATTTAATATCAATTATATGTTACATTATTTTTAATATTTTGTGATATAATTGAATATAAAATGAATGTGGTAACAATTGTTCATTATAATAATTTCATTCTAAATGAGTTTTGTGTTATTTCTCAACGTCACTTTTTATTATTTTATTTCATAGGTTTCATATTGCTTTTATTGGTTGTTGTTGGACAACACCCCATGTTTGGTTTATGTTTGTGTGATTAAGGAGTGATAGGGTGACATATTAGTTTGTGTTCTTACGTAGGAAAAGGCGAGCAATTTGATGGACAAGGCAAGTGATGCAGCGCAATCAACTAAAGAATCAATACAAGAAACAGGACAACAGGTGAAGGAGAAGGCGCAAGGGGCCGCTGATGCGGTTAAGGATGCAATTAACAAATGA

mRNA sequence

ATGGATAACTCCCAAAAGTTGAGCTATCATGCCGGGGAAGCCAAGGGTCAAGCTCAGGAAAAGGCGAGCAATTTGATGGACAAGGCAAGTGATGCAGCGCAATCAACTAAAGAATCAATACAAGAAACAGGACAACAGGTGAAGGAGAAGGCGCAAGGGGCCGCTGATGCGGTTAAGGATGCAATTAACAAATGA

Coding sequence (CDS)

ATGGATAACTCCCAAAAGTTGAGCTATCATGCCGGGGAAGCCAAGGGTCAAGCTCAGGAAAAGGCGAGCAATTTGATGGACAAGGCAAGTGATGCAGCGCAATCAACTAAAGAATCAATACAAGAAACAGGACAACAGGTGAAGGAGAAGGCGCAAGGGGCCGCTGATGCGGTTAAGGATGCAATTAACAAATGA

Protein sequence

MDNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDAINK
Homology
[Close]
BLAST of Cla016476 vs. Swiss-Prot
Match: KIN2_ARATH (Stress-induced protein KIN2 OS=Arabidopsis thaliana GN=KIN2 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-06
Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 1 

Query: 1  MDNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKD 60
          M  + K ++ AG+A G+A+EK++ L+DKA DAA +   S Q+ G+ + + A G  + VKD
Sbjct: 1  MSETNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKD 60

[Close]
BLAST of Cla016476 vs. TrEMBL
Match: A0A0A0KXN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-21
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNSQK+SYHAGEAKGQ QEK SN+MDKASDAAQS KES+QETGQQ+  KAQGAADAVKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 INK 65
          +NK
Sbjct: 63 VNK 65

[Close]
BLAST of Cla016476 vs. TrEMBL
Match: A0A0A0KRE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.6e-19
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNS+K+SYH GEAKGQAQEKASNLMDKA D AQS KES+QE GQQ+K KAQGAADAVKDA
Sbjct: 3  DNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVKDA 62

[Close]
BLAST of Cla016476 vs. TrEMBL
Match: A0A0A0KSI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643240 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.5e-19
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          +NS K+S+ AGEAKGQAQEKASNLMDKAS+AA+S KESIQETGQQ+  KAQGAADA KDA
Sbjct: 4  NNSNKMSFQAGEAKGQAQEKASNLMDKASNAAESAKESIQETGQQMMAKAQGAADAAKDA 63

Query: 62 INK 65
          +NK
Sbjct: 64 VNK 66

[Close]
BLAST of Cla016476 vs. TrEMBL
Match: A0A0A0KPD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-18
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNSQ +SY  GEAKGQAQEKASN+M+KASDAAQS KESIQE GQQ+K KAQGAADAVKDA
Sbjct: 3  DNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVKDA 62

[Close]
BLAST of Cla016476 vs. TrEMBL
Match: M5X8G5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa027087mg PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.5e-18
Identity = 47/60 (78.33%), Postives = 56/60 (93.33%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNSQK+SYHAGEAKGQAQEKAS +MDKA++AAQSTKE++Q+ GQ V+ KAQGAADAVK+A
Sbjct: 3  DNSQKMSYHAGEAKGQAQEKASGMMDKANNAAQSTKETMQDVGQNVQAKAQGAADAVKNA 62

[Close]
BLAST of Cla016476 vs. NCBI nr
Match: gi|449447458|ref|XP_004141485.1| (PREDICTED: late embryogenesis abundant protein 2-like [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-21
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNSQK+SYHAGEAKGQ QEK SN+MDKASDAAQS KES+QETGQQ+  KAQGAADAVKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 INK 65
          +NK
Sbjct: 63 VNK 65

[Close]
BLAST of Cla016476 vs. NCBI nr
Match: gi|659119052|ref|XP_008459449.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-21
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 1 

Query: 1  MDNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKD 60
          MDNSQK+SYHAGEAKGQ QEK SN+MDKAS+AAQSTKES+QE GQQ+  KAQGA DAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AINK 65
          A+NK
Sbjct: 61 AVNK 64

[Close]
BLAST of Cla016476 vs. NCBI nr
Match: gi|659073373|ref|XP_008437025.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-20
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNSQK+SYH GEAKGQAQEKASN+MDKASD AQS KES+QE GQQ+K KAQGAADAVKDA
Sbjct: 3  DNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVKDA 62

[Close]
BLAST of Cla016476 vs. NCBI nr
Match: gi|1009127017|ref|XP_015880470.1| (PREDICTED: stress-induced protein KIN2-like [Ziziphus jujuba])

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-19
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNSQK+SYHAGEAKG+AQEKA N+MDKAS+AAQS KES+QE GQQ+K KAQGAADAVKDA
Sbjct: 3  DNSQKMSYHAGEAKGRAQEKAGNMMDKASNAAQSAKESVQEAGQQMKAKAQGAADAVKDA 62

[Close]
BLAST of Cla016476 vs. NCBI nr
Match: gi|659119054|ref|XP_008459450.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-19
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 1 

Query: 2  DNSQKLSYHAGEAKGQAQEKASNLMDKASDAAQSTKESIQETGQQVKEKAQGAADAVKDA 61
          DNSQK+SY+AGEAKGQ QEK SN+MDKAS+AA+S KES QETGQQ+  KA+GAADAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQIMAKAEGAADAVKDA 62

Query: 62 INK 65
          +NK
Sbjct: 63 VNK 65

The following BLAST results are available for this feature:
BLAST of Cla016476 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KIN2_ARATH2.2e-0640.00Stress-induced protein KIN2 OS=Arabidopsis thaliana GN=KIN2 PE=2 SV=1[more]
BLAST of Cla016476 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXN2_CUCSA1.3e-2184.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643250 PE=4 SV=1[more]
A0A0A0KRE1_CUCSA2.6e-1983.33Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1[more]
A0A0A0KSI8_CUCSA4.5e-1979.37Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643240 PE=4 SV=1[more]
A0A0A0KPD4_CUCSA1.7e-1883.33Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1[more]
M5X8G5_PRUPE6.5e-1878.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa027087mg PE=4 SV=1[more]
BLAST of Cla016476 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447458|ref|XP_004141485.1|1.8e-2184.13PREDICTED: late embryogenesis abundant protein 2-like [Cucumis sativus][more]
gi|659119052|ref|XP_008459449.1|4.1e-2181.25PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
gi|659073373|ref|XP_008437025.1|7.7e-2085.00PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
gi|1009127017|ref|XP_015880470.1|1.7e-1983.33PREDICTED: stress-induced protein KIN2-like [Ziziphus jujuba][more]
gi|659119054|ref|XP_008459450.1|2.9e-1977.78PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016476Cla016476.1mRNA