Cp4.1LG01g14330 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g14330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionIron-sulfur cluster assembly protein, putative
LocationCp4.1LG01 : 7729878 .. 7734240 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAAAAAGGTGAAAGCTGTCGAGTAAATGAACATTTGCGAGTCTATTTGGAGAGGAAAAAATTGATAGGATCGTGGAGGGAAATGGCAGCTTCTTCGTCTTCCTTTCTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCCAAATTCTTACTCTGACGGAGGCCGCCGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTCCGCCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGGTTCGTAATACCTAATGAATTTTAACTTTTTCTTGATTGTTTGCGATTTCACTTTACTCGTTTTATGTCTGAATTTTAGGATGTGATGAAAAATTTCGATTATGTATCCTCTTTTCTATGAATCAGATGTTGCTGTTTGAATTTGATTCGAGATAATTAGGTATTTCGTTTATTTGAACGATATAACCTAACAGTTAAAGAGGAGATGTGTCGGAACTGGAGTCCTTTAGAAGAAAATTTCTCTATCCTTTAAGTGTTTCCAGCTCCAGTTACCAAGAATCATGATTTTAAGACCGAGGATTTATTATGATTATTAGATGCAGAAAACTAGAAGGTTAAATGATTCTGTAATTGTCATAACCAGAATTGGGCCTGGGTATGGTTGGCGAGTTGTTCGAAGATGAGCGTTGCGTTCTTGATATCCTTAACAAACGGCAAATCTGAAAGATAAAACTGACATGCCTGAATGCATCAGTTGATAGACTAAAATGATCTTTCATGCAGGGTCCTATGTATGAGAGGAGAATTAACTTAACTACTACTTCAGTCTGTAAACCATTCTGGATCTTATAGAATAGTTATGAATTTAATGGTGTTACCAGACGGGAAGTTTGGATTCGACAAGTTGCTTTACAAACTTTCGACATAGGGATTAATGGATTATTGATATACTACTATCCCAGACTAAACGTATGTTTCTCCCAAATTTATGGTGAGCATTTGTTTCCATCAAGTACCATTTACTTTGTGGTGTAGGTTGGCTATTGCGAGAACATAGCAGGAATGGATTAAATTGTACTTGAGAACCTTTTCTCTCTCTTTCCCATGGCTCAAACCTACCGCTAGCAGATATTGATCTCTTTGGGCTTTCCCTCTCGGGCTTCCCTAAAAAATTTTAAAATGCGTCTGCTAGGAAGAGGTTTTCACACCTTATAAAGAAAGTCTCCTCAATCGATGTGGAATCTCACAATCCACCCCCTTCGGGGCCTAGCATCCTCGCCGGCGTTGATACTCATTCCCTTCTCCATTCGATGTGGGACCCCCACCCCCCTTCGAGGTTCAACATCCTTGCTAGTATGACATCTCCTGTCCACCCCCCTTTGGGGCTTAGCCTCGTTGCTAGCACAATGTCTGGTGTCTGGTTCTGATACCAATTGTAACGGCCCAAGCCTACTGCAAGTAGATATTGTCCTCTTTGGGCCTTTTCCTTTCCGGCTTCCCCTCAAAGTTTTCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCAAACCAACGTGGGATCTCACAGTTAATTAGTATGTTATTGGACCAAAGTGTTGTTTTTATTTAATTAGAAGATAAATAGGTTAACAAGCCTCTAAGGGTCAACTTGGAGCTATCATGTTAGAAGGTCAGAAGTTTGAGATTTTATACACTGTGGGTTGGGACTTACTATTGTTTGTGTTTATTTAATATGGCTATTTTCTCAGTTATCAGTATTCACAATTCAGCTTTTTATGGCTGATTGGATGATTTTCTATCTCAGCATTACCTCAGTTTCATAATCACATTATCATTGAACATTTTCCTTGTGCAAGAAATAGGATTCAACCATTACCTTTCCTTTGGCATAAATGGACTCTAGTTATGATCTCCATCTGTTGAAATACTTCAATATTGCATTATTTCGTATCAACATTTTCATTTGTCAAATATTTCAGATGAGAAAGGGAAGTTCGATGAACTGGTCGAGGATCAAAATGTGAAGATACTGATTGAACCGAAGGCGCTGATGCACGTAATAGGAACAAAGATGGACTTCGTAGATGACAAATTGAGGTATTTGAGAAATCTCTTACCTACAATTTTATGTTTTCAGCTCAATTATCATCCATATGTTGAGGAAATATCCTGCATGCTAGTTATTACATCAAACTGACATATAATGGCTCCTAGAAACGCTACATTGCTATTCCAAAATCCGAACATATTCTAAAAGGTCTTAATCAGCTGTGAGCTAATTCCATTCTGAATGCTCCTCAATCAATTTTCTATAGTGCTGGAGGTGTTTTATTATTATTTTGCACAGAACAGTTAAAAATTTATTAGATTCAGTCCATTCGAAACTCATTACATAAGACACAAATGATCATCTCGTAGGCGAATGAAACTTATTTTCTCTCTTTCTTCTTGGTAGATCCGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAGGCAGTGCAGAAGCCAAGAAAAAATGAGCACTGTTAGAAAAACTCAAAACTCAAAACTCACAGTTGCATATTTGTTGTGTATTTTGCTGGAATTACAAACCCTAAACCTTAGAGAGTTCTATGACAAGAACTTAAAGCAGCTGTAAGAACACTTATCTATGGCTAATTAATTTGTTAGAAAGCCATTTAGCCATTGTACTCTGCTAATTATTTCCTTTTCTCTTGCATGTAAATTACTGTAGATTGCACTGGCTAATGAGTTCTTCTGAGGTAATAAAATTCTCCCACGACTTTCTTTCGTTATAGGACTTGGTTATTGGTTACCATAACCATCCTGCATGCCTTATAATTGGTCAAGTAATAATCAATCGGTTAAAATTTATGTCATCGATTCAAATCTTTTTATTCTCAAGGAAAAAGTACAAATAAATAAATTTTAATTTGAGAAGAACACGAGAAAAGCATTAGATTTATGGTGACAGTGATTCTCATTCTTGCAACTCACTATGATTATTTCGTTTTCGTTTTTCTATTTTTTCAAATTTTATGCTTATTTCTTTCTAATTTTCTTCTTTATCTTGTTTTGTTTATGAATTCTTAATTAAAATCCAAAAGGAGAAACAAGTATTTAAAAATTATTCTTTAAGCTTTTACAATTTTGCTAATTAGTGGTTTAGTATATAGTTAATCGTCTTTTTATAATTGTAACACTAATTTTTTTTATTTCTATTCCTCATTGCTTTCTTAATTTCCAAACCATAATGAAAGTCATGAGCAAAAGTTAGACTTTTAAGTTCAAGAAAAGGGGAGCAAAACAAAGGCAAGCAAACAACAACCAACCCACCAATCATTTTGGCTTAGCTAACCCACTCTCTTCGTTCCCAAGCAAAGTCTTCTGAAGAATAAGACAGAAACAGCTATTAAATTTGTACCAAAACCCACTAGTTTTTAGCCAATTTGGTCCCCTGTGGTTGCTCACAACTCTCTGCAAAACCATGGTTCCAAAAATGCTGGTTCTGTTTCTCATCATCTTCCATGGATCTCTGACCTTGGCGTCGGATCCTGATCCGGTATTCGACTTCTGCTTGCCGAGCGGGACTCATTCACCCTGCAAGAACTCTTCCCTGGCTAAGGTAGAAGACTTCATTTTCTCTGGCATAAAGTTCCCTGGAAAGTTTATTAATGGATCTGGCTTTTCATCCATAGCTGTTAATTCAAACGTGTTCCCGGGTCTTAACACGCTCGGAATGTCTATGGTTAGAGCGGATTTTGACGTTGGAGGTGTCAATGTTCCGCATTTTCATCCTAGAGCTACTGAAGTGGCTGTTGTTCTTGAAGGAAAGATATATTCTGGGTTTGTGGATACCAGTAACCGGATATTTGCTAAGGTAATTGAGAAAGGTGAGGTCATGGTGTTTCCTAGAGGCTTAGTTCATTTCCAAATGAATGTTGGAGAAACTCCAGCAACAATTATAGGGAGTTTTGACAGCCAAAATCCTGGACTAATGAAAATTCCAGCTGCTGTTTTCGGATCCGGGATCAAAGAAGATCTCCTGGAGAAGGCTTTTGGATTGAGCCCCGAGGAGCTCGCAAAGCTGAAAAAGAGGCATGCTTCCCATTCATTAGGCTAGAGCTTTAAGGTTGTTGTTTCAGTTAAATCGACAACGTCAAAGAAGCTCGGAGATGTCTTCTTCGCATCAATGACATTATTTATATCCAAAAGTTTGGAATTATGTTCTCTTTGGCAATGATTTACTTTTATTTATCTTGTCCTACAAGATTTTGCGCTATTTTCCTCAAAGACAATAACGTATTTTCCTTTTGATA

mRNA sequence

AAAAAAAAAAAAAAAAGGTGAAAGCTGTCGAGTAAATGAACATTTGCGAGTCTATTTGGAGAGGAAAAAATTGATAGGATCGTGGAGGGAAATGGCAGCTTCTTCGTCTTCCTTTCTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCCAAATTCTTACTCTGACGGAGGCCGCCGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTCCGCCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGATGAGAAAGGGAAGTTCGATGAACTGGTCGAGGATCAAAATGTGAAGATACTGATTGAACCGAAGGCGCTGATGCACGTAATAGGAACAAAGATGGACTTCGTAGATGACAAATTGAGATCCGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAGGCAGTGCAGAAGCCAAGAAAAAATGAGCACTGTTAGAAAAACTCAAAACTCAAAACTCACAGTTGCATATTTGTTGTGTATTTTGCTGGAATTACAAACCCTAAACCTTAGAGAGTTCTATGACAAGAACTTAAAGCAGCTATTGCACTGGCTAATGAGTTCTTCTGAGGTAATAAAATTCTCCCACGACTTTCTTTCGTTATAGGACTTGGTTATTGGTTACCATAACCATCCTGCATGCCTTATAATTGGTCAAGTAATAATCAATCGGTTAAAATTTATGTCATCGATTCAAATCTTTTTATTCTCAAGGAAAAAGTACAAATAAATAAATTTTAATTTGAGAAGAACACGAGAAAAGCATTAGATTTATGGTGACAGTGATTCTCATTCTTGCAACTCACTATGATTATTTCGTTTTCGTTTTTCTATTTTTTCAAATTTTATGCTTATTTCTTTCTAATTTTCTTCTTTATCTTGTTTTGTTTATGAATTCTTAATTAAAATCCAAAAGGAGAAACAAGTATTTAAAAATTATTCTTTAAGCTTTTACAATTTTGCTAATTAGTGGTTTAGTATATAGTTAATCGTCTTTTTATAATTGTAACACTAATTTTTTTTATTTCTATTCCTCATTGCTTTCTTAATTTCCAAACCATAATGAAAGCAAGCAAACAACAACCAACCCACCAATCATTTTGGCTTAGCTAACCCACTCTCTTCGTTCCCAAGCAAAGTCTTCTGAAGAATAAGACAGAAACAGCTATTAAATTTGTACCAAAACCCACTAGTTTTTAGCCAATTTGGTCCCCTGTGGTTGCTCACAACTCTCTGCAAAACCATGGTTCCAAAAATGCTGGTTCTGTTTCTCATCATCTTCCATGGATCTCTGACCTTGGCGTCGGATCCTGATCCGGTATTCGACTTCTGCTTGCCGAGCGGGACTCATTCACCCTGCAAGAACTCTTCCCTGGCTAAGCTGTTAATTCAAACGTGTTCCCGGGTCTTAACACGCTCGGAATGTCTATGGTTAGAGCGGATTTTGACGTTGGAGGTGTCAATGTTCCGCATTTTCATCCTAGAGCTACTGAAGTGGCTGTTGTTCTTGAAGGAAAGATATATTCTGGGTTTGTGGATACCAGTAACCGGATATTTGCTAAGGTAATTGAGAAAGCTGCTGTTTTCGGATCCGGGATCAAAGAAGATCTCCTGGAGAAGGCTTTTGGATTGAGCCCCGAGGAGCTCGCAAAGCTGAAAAAGAGGCATGCTTCCCATTCATTAGGCTAGAGCTTTAAGGTTGTTGTTTCAGTTAAATCGACAACGTCAAAGAAGCTCGGAGATGTCTTCTTCGCATCAATGACATTATTTATATCCAAAAGTTTGGAATTATGTTCTCTTTGGCAATGATTTACTTTTATTTATCTTGTCCTACAAGATTTTGCGCTATTTTCCTCAAAGACAATAACGTATTTTCCTTTTGATA

Coding sequence (CDS)

ATGGCAGCTTCTTCGTCTTCCTTTCTCGCCGCAGCTTCTCAGAAGGTCGGACCAGCCGCTCGCCGCCAAATTCTTACTCTGACGGAGGCCGCCGCCGCTAGAATTCGACAACTTCTTCAACAGCGCCAACGTCCATTCCTCCGCCTTGGCGTCAAGGCGCGCGGTTGTAATGGTTTATCCTATACTCTCAACTACGCAGATGAGAAAGGGAAGTTCGATGAACTGGTCGAGGATCAAAATGTGAAGATACTGATTGAACCGAAGGCGCTGATGCACGTAATAGGAACAAAGATGGACTTCGTAGATGACAAATTGAGATCCGAGTTTATCTTTATCAATCCAAATTCGAAAGGTCAATGTGGCTGTGGGGAGTCCTTTATGACAACAGGCAGTGCAGAAGCCAAGAAAAAATGA

Protein sequence

MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTTGSAEAKKK
Homology
[Close]
BLAST of Cp4.1LG01g14330 vs. Swiss-Prot
Match: ISAM1_ARATH (Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g16710 PE=2 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-55
Identity = 104/132 (78.79%), Postives = 122/132 (92.42%), Query Frame = 1 

Query: 5   SSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLN 64
           +S  LAAA+ +VGPA R+Q+LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 124
           YADEKGKFDELVE++ V+IL+EPKALMHVIGTKMDFVDDKLRSEF+FINPNS+GQCGCGE
Sbjct: 63  YADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGE 122

Query: 125 SFMTTGSAEAKK 137
           SFMTT ++ AK+
Sbjct: 123 SFMTTSTSSAKQ 134

[Close]
BLAST of Cp4.1LG01g14330 vs. Swiss-Prot
Match: ISAM3_ARATH (Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana GN=At2g36260 PE=3 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 4.0e-42
Identity = 80/109 (73.39%), Postives = 99/109 (90.83%), Query Frame = 1 

Query: 21  RRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQN 80
           R+Q+L L++ AAARIRQLLQ +Q+PFLRL V+A+GCNGLSY LNYA EKGKFDE+VE++ 
Sbjct: 2   RKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKG 61

Query: 81  VKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 130
           VKIL++PKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 62  VKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

[Close]
BLAST of Cp4.1LG01g14330 vs. Swiss-Prot
Match: ISA1_YEAST (Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ISA1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 57/107 (53.27%), Postives = 78/107 (72.90%), Query Frame = 1 

Query: 21  RRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQN 80
           R+ ++TL+  A   +R LL Q +   +R+  + RGC+GL+Y L Y  E GKFDE+VE   
Sbjct: 143 RKALITLSPKAIKHLRALLAQPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDG 202

Query: 81  VKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFM 128
           VKI+I+ KAL  +IG++MD++DDKL S+F+F NPNSKG CGCGESFM
Sbjct: 203 VKIVIDSKALFSIIGSEMDWIDDKLASKFVFKNPNSKGTCGCGESFM 249

[Close]
BLAST of Cp4.1LG01g14330 vs. Swiss-Prot
Match: ISCA1_DICDI (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=isca1 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-26
Identity = 53/118 (44.92%), Postives = 90/118 (76.27%), Query Frame = 1 

Query: 15  KVGPAARRQILTLTEAAAARIRQLLQQRQRPF---LRLGVKARGCNGLSYTLNYADEKGK 74
           K+G  +++ I ++T++A  R+++++  ++      LRLG+K RGC+G+SYTL++A +K K
Sbjct: 8   KLGKPSKKAIFSMTDSALKRVKEIMNDKKIDNCIGLRLGIKERGCSGMSYTLDFATQKNK 67

Query: 75  FDE-LVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMT 129
           FDE +V D+++ I+++ KAL+ VIGT+MD++++ ++ EFIFINPN+   CGCGESF T
Sbjct: 68  FDETVVADKDINIIVDSKALLSVIGTEMDYIEEPIKKEFIFINPNATNTCGCGESFTT 125

[Close]
BLAST of Cp4.1LG01g14330 vs. Swiss-Prot
Match: ISCA1_DROME (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster GN=l(1)G0136 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.9e-26
Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 1 

Query: 4   SSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPF-LRLGVKARGCNGLSYT 63
           ++++  A   +K+ P   R  LTLT AA  RI+ LLQ +     L++GV+ RGCNGLSYT
Sbjct: 7   ATATVRAVKGRKLIPT--RAALTLTPAAVLRIKTLLQDKPDMVGLKVGVRQRGCNGLSYT 66

Query: 64  LNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGC 123
           L+YA +K K DE V    VK+ I+ KA + ++GT+MDFV+ KL SEF+F NPN KG CGC
Sbjct: 67  LDYASQKDKLDEEVVQDGVKVFIDKKAQLSLLGTEMDFVESKLSSEFVFNNPNIKGTCGC 126

Query: 124 GESF 127
           GESF
Sbjct: 127 GESF 128

[Close]
BLAST of Cp4.1LG01g14330 vs. TrEMBL
Match: A0A0A0KTF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614650 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.4e-65
Identity = 133/137 (97.08%), Postives = 133/137 (97.08%), Query Frame = 1 

Query: 1   MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAASSSSF AAASQK GPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEAKKK 138
           GCGESFMTT SAEA KK
Sbjct: 121 GCGESFMTTSSAEANKK 137

[Close]
BLAST of Cp4.1LG01g14330 vs. TrEMBL
Match: B8R1J7_EUCGR (Iron-sulfer cluster scaffold protein ISA1 (Fragment) OS=Eucalyptus grandis GN=ISA1 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.6e-56
Identity = 113/137 (82.48%), Postives = 127/137 (92.70%), Query Frame = 1 

Query: 1   MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAA S+S LAAA+ + G AARRQ+LT+T+AAA+RIR LLQQRQRPFLRLGVKARGCNGLS
Sbjct: 28  MAAPSASKLAAAADRFGSAARRQVLTVTDAAASRIRHLLQQRQRPFLRLGVKARGCNGLS 87

Query: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYAD KGKFDELVED+ +KIL+EPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 88  YTLNYADSKGKFDELVEDKGIKILVEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 147

Query: 121 GCGESFMTTGSAEAKKK 138
           GCGESFMTT +++A K+
Sbjct: 148 GCGESFMTTSNSDAAKR 164

[Close]
BLAST of Cp4.1LG01g14330 vs. TrEMBL
Match: A0A059AA55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00259 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.6e-56
Identity = 113/137 (82.48%), Postives = 127/137 (92.70%), Query Frame = 1 

Query: 1   MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAA S+S LAAA+ + G AARRQ+LT+T+AAA+RIR LLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAAPSASKLAAAADRFGSAARRQVLTVTDAAASRIRHLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYAD KGKFDELVED+ +KIL+EPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADSKGKFDELVEDKGIKILVEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEAKKK 138
           GCGESFMTT +++A K+
Sbjct: 121 GCGESFMTTSNSDAAKR 137

[Close]
BLAST of Cp4.1LG01g14330 vs. TrEMBL
Match: A0A126I616_PRUPE (Fe-S cluster assembly transfer protein 17 OS=Prunus persica var. persica GN=ISA1 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 7.6e-56
Identity = 109/133 (81.95%), Postives = 127/133 (95.49%), Query Frame = 1 

Query: 5   SSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLN 64
           +S FLAAA++++GPAARRQ ++LT+AAA+RIRQLL+QR+RP+L+LGVKARGCNGLSYTLN
Sbjct: 2   ASQFLAAAAERIGPAARRQAVSLTDAAASRIRQLLEQRRRPYLKLGVKARGCNGLSYTLN 61

Query: 65  YADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 124
           YAD+KGKFDELVED+ VKILI+PKALMHVIGTKMDFVDDKLRSEF+FINPNSKGQCGCGE
Sbjct: 62  YADDKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGE 121

Query: 125 SFMTTGSAEAKKK 138
           SFMTTG + A KK
Sbjct: 122 SFMTTGVSGATKK 134

[Close]
BLAST of Cp4.1LG01g14330 vs. TrEMBL
Match: M5W3V9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013203mg PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 7.6e-56
Identity = 109/133 (81.95%), Postives = 127/133 (95.49%), Query Frame = 1 

Query: 5   SSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLN 64
           +S FLAAA++++GPAARRQ ++LT+AAA+RIRQLL+QR+RP+L+LGVKARGCNGLSYTLN
Sbjct: 2   ASQFLAAAAERIGPAARRQAVSLTDAAASRIRQLLEQRRRPYLKLGVKARGCNGLSYTLN 61

Query: 65  YADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 124
           YAD+KGKFDELVED+ VKILI+PKALMHVIGTKMDFVDDKLRSEF+FINPNSKGQCGCGE
Sbjct: 62  YADDKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGE 121

Query: 125 SFMTTGSAEAKKK 138
           SFMTTG + A KK
Sbjct: 122 SFMTTGVSGATKK 134

[Close]
BLAST of Cp4.1LG01g14330 vs. TAIR10
Match: AT2G16710.3 (AT2G16710.3 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 209.9 bits (533), Expect = 9.8e-55
Identity = 104/138 (75.36%), Postives = 122/138 (88.41%), Query Frame = 1 

Query: 5   SSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLN 64
           +S  LAAA+ +VGPA R+Q+LTLT+ AA+R+  LLQQRQ+PFLRLGVKARGCNGLSYTLN
Sbjct: 3   ASQILAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLN 62

Query: 65  YA------DEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKG 124
           YA      DEKGKFDELVE++ V+IL+EPKALMHVIGTKMDFVDDKLRSEF+FINPNS+G
Sbjct: 63  YAGKTSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQG 122

Query: 125 QCGCGESFMTTGSAEAKK 137
           QCGCGESFMTT ++ AK+
Sbjct: 123 QCGCGESFMTTSTSSAKQ 140

[Close]
BLAST of Cp4.1LG01g14330 vs. TAIR10
Match: AT2G36260.1 (AT2G36260.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-43
Identity = 80/109 (73.39%), Postives = 99/109 (90.83%), Query Frame = 1 

Query: 21  RRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEDQN 80
           R+Q+L L++ AAARIRQLLQ +Q+PFLRL V+A+GCNGLSY LNYA EKGKFDE+VE++ 
Sbjct: 2   RKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKG 61

Query: 81  VKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 130
           VKIL++PKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 62  VKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

[Close]
BLAST of Cp4.1LG01g14330 vs. NCBI nr
Match: gi|449434502|ref|XP_004135035.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 3.4e-65
Identity = 133/137 (97.08%), Postives = 133/137 (97.08%), Query Frame = 1 

Query: 1   MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAASSSSF AAASQK GPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEAKKK 138
           GCGESFMTT SAEA KK
Sbjct: 121 GCGESFMTTSSAEANKK 137

[Close]
BLAST of Cp4.1LG01g14330 vs. NCBI nr
Match: gi|659091836|ref|XP_008446757.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 131/137 (95.62%), Postives = 132/137 (96.35%), Query Frame = 1 

Query: 1   MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAASSSSF AAASQK GPA RRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAASSSSFFAAASQKAGPAVRRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYADEKGKFDELVEDQNVKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADEKGKFDELVEDQNVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEAKKK 138
           GCGESFMTT SAEA KK
Sbjct: 121 GCGESFMTTSSAEANKK 137

[Close]
BLAST of Cp4.1LG01g14330 vs. NCBI nr
Match: gi|702473214|ref|XP_010031271.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Eucalyptus grandis])

HSP 1 Score: 226.1 bits (575), Expect = 3.7e-56
Identity = 113/137 (82.48%), Postives = 127/137 (92.70%), Query Frame = 1 

Query: 1   MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAA S+S LAAA+ + G AARRQ+LT+T+AAA+RIR LLQQRQRPFLRLGVKARGCNGLS
Sbjct: 1   MAAPSASKLAAAADRFGSAARRQVLTVTDAAASRIRHLLQQRQRPFLRLGVKARGCNGLS 60

Query: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYAD KGKFDELVED+ +KIL+EPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 61  YTLNYADSKGKFDELVEDKGIKILVEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120

Query: 121 GCGESFMTTGSAEAKKK 138
           GCGESFMTT +++A K+
Sbjct: 121 GCGESFMTTSNSDAAKR 137

[Close]
BLAST of Cp4.1LG01g14330 vs. NCBI nr
Match: gi|209484093|gb|ACI47521.1| (iron-sulfer cluster scaffold protein ISA1, partial [Eucalyptus grandis])

HSP 1 Score: 226.1 bits (575), Expect = 3.7e-56
Identity = 113/137 (82.48%), Postives = 127/137 (92.70%), Query Frame = 1 

Query: 1   MAASSSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLS 60
           MAA S+S LAAA+ + G AARRQ+LT+T+AAA+RIR LLQQRQRPFLRLGVKARGCNGLS
Sbjct: 28  MAAPSASKLAAAADRFGSAARRQVLTVTDAAASRIRHLLQQRQRPFLRLGVKARGCNGLS 87

Query: 61  YTLNYADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 120
           YTLNYAD KGKFDELVED+ +KIL+EPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC
Sbjct: 88  YTLNYADSKGKFDELVEDKGIKILVEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQC 147

Query: 121 GCGESFMTTGSAEAKKK 138
           GCGESFMTT +++A K+
Sbjct: 148 GCGESFMTTSNSDAAKR 164

[Close]
BLAST of Cp4.1LG01g14330 vs. NCBI nr
Match: gi|645272111|ref|XP_008241238.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Prunus mume])

HSP 1 Score: 224.9 bits (572), Expect = 8.3e-56
Identity = 108/133 (81.20%), Postives = 127/133 (95.49%), Query Frame = 1 

Query: 5   SSSFLAAASQKVGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLN 64
           +S FLAAA++++GPAARRQ ++LT+AAA+RIRQLL+QR+RP+L+LGVKARGCNGLSYTLN
Sbjct: 2   ASQFLAAAAERIGPAARRQAVSLTDAAASRIRQLLEQRRRPYLKLGVKARGCNGLSYTLN 61

Query: 65  YADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 124
           YAD+KGKFDELVED+ VK+LI+PKALMHVIGTKMDFVDDKLRSEF+FINPNSKGQCGCGE
Sbjct: 62  YADDKGKFDELVEDKGVKVLIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGE 121

Query: 125 SFMTTGSAEAKKK 138
           SFMTTG + A KK
Sbjct: 122 SFMTTGGSGATKK 134

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g14330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ISAM1_ARATH1.9e-5578.79Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana ... [more]
ISAM3_ARATH4.0e-4273.39Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana ... [more]
ISA1_YEAST1.3e-2753.27Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /... [more]
ISCA1_DICDI2.4e-2644.92Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Dictyostelium discoideu... [more]
ISCA1_DROME6.9e-2651.61Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster... [more]
BLAST of Cp4.1LG01g14330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTF0_CUCSA2.4e-6597.08Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614650 PE=4 SV=1[more]
B8R1J7_EUCGR2.6e-5682.48Iron-sulfer cluster scaffold protein ISA1 (Fragment) OS=Eucalyptus grandis GN=IS... [more]
A0A059AA55_EUCGR2.6e-5682.48Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00259 PE=4 SV=1[more]
A0A126I616_PRUPE7.6e-5681.95Fe-S cluster assembly transfer protein 17 OS=Prunus persica var. persica GN=ISA1... [more]
M5W3V9_PRUPE7.6e-5681.95Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013203mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g14330 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G16710.39.8e-5575.36 Iron-sulphur cluster biosynthesis family protein[more]
AT2G36260.12.3e-4373.39 Iron-sulphur cluster biosynthesis family protein[more]
BLAST of Cp4.1LG01g14330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434502|ref|XP_004135035.1|3.4e-6597.08PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis sati... [more]
gi|659091836|ref|XP_008446757.1|2.2e-6495.62PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Cucumis melo... [more]
gi|702473214|ref|XP_010031271.1|3.7e-5682.48PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Eucalyptus g... [more]
gi|209484093|gb|ACI47521.1|3.7e-5682.48iron-sulfer cluster scaffold protein ISA1, partial [Eucalyptus grandis][more]
gi|645272111|ref|XP_008241238.1|8.3e-5681.20PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: INTERPRO
TermDefinition
IPR017870FeS_cluster_insertion_CS
IPR016092FeS_cluster_insertion
IPR000361FeS_biogenesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0097428 protein maturation by iron-sulfur cluster transfer
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008897 holo-[acyl-carrier-protein] synthase activity
molecular_function GO:0000287 magnesium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g14330.1Cp4.1LG01g14330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000361FeS cluster biogenesisGENE3DG3DSA:2.60.300.12coord: 24..117
score: 8.7
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 25..124
score: 8.2
IPR000361FeS cluster biogenesisunknownSSF89360HesB-like domaincoord: 24..117
score: 6.67
IPR016092FeS cluster insertion proteinTIGRFAMsTIGR00049TIGR00049coord: 25..127
score: 1.4
IPR017870FeS cluster insertion, C-terminal, conserved sitePROSITEPS01152HESBcoord: 109..126
scor
NoneNo IPR availablePANTHERPTHR10072IRON-SULFUR CLUSTER ASSEMBLY PROTEINcoord: 15..128
score: 1.2
NoneNo IPR availablePANTHERPTHR10072:SF51SUBFAMILY NOT NAMEDcoord: 15..128
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g14330Cucsa.282590Cucumber (Gy14) v1cgycpeB0750
Cp4.1LG01g14330CmaCh18G009490Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g14330CmoCh18G009510Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g14330CmoCh04G015070Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g14330Cla020489Watermelon (97103) v1cpewmB427
Cp4.1LG01g14330Csa5G614650Cucumber (Chinese Long) v2cpecuB439
Cp4.1LG01g14330MELO3C012350Melon (DHL92) v3.5.1cpemeB363
Cp4.1LG01g14330ClCG05G021780Watermelon (Charleston Gray)cpewcgB388
Cp4.1LG01g14330CSPI05G26340Wild cucumber (PI 183967)cpecpiB439
Cp4.1LG01g14330Lsi04G001520Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g14330MELO3C012350.2Melon (DHL92) v3.6.1cpemedB423
Cp4.1LG01g14330CsaV3_5G035380Cucumber (Chinese Long) v3cpecucB0543
Cp4.1LG01g14330Bhi07G000635Wax gourdcpewgoB0569
Cp4.1LG01g14330CsGy5G025800Cucumber (Gy14) v2cgybcpeB648
Cp4.1LG01g14330Carg18993Silver-seed gourdcarcpeB1466
Cp4.1LG01g14330Carg01902Silver-seed gourdcarcpeB1177
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g14330Cp4.1LG09g03640Cucurbita pepo (Zucchini)cpecpeB040
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g14330Cucurbita pepo (Zucchini)cpecpeB379
Cp4.1LG01g14330Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g14330Cucurbita maxima (Rimu)cmacpeB733
Cp4.1LG01g14330Cucurbita moschata (Rifu)cmocpeB689
Cp4.1LG01g14330Bottle gourd (USVL1VR-Ls)cpelsiB384
Cp4.1LG01g14330Watermelon (Charleston Gray)cpewcgB416
Cp4.1LG01g14330Watermelon (97103) v1cpewmB394