Cp4.1LG01g08570 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g08570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionThioredoxin
LocationCp4.1LG01 : 4906003 .. 4908639 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACGGTTCTCGATTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGCGCTTCCGCGCTACAGAGCATTGAAGGTCGGACACAGCTTCACTTCTCATTCTATAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGGCAGAGTCGTCTGCGAAGGTCAGGAAACTTCTTCCATAGGTTCGGATTTTGTTCTGTTGTTTTCTTTTATTGTGTTGTTTGGCTTTTGGGAGAAGGGAAGAAAGGAAAATTTAGGACACTTGTAAGTTTGGTGAATTGATGAAGATCATACTCTTAAGTGTCTATTGGTGTTTGGTTTGGTTTTGATAAAAGTTGAAACTAAACTGTATAATTAACAAATAGTAGGTTAGATCATTACTAGAGTTATATGCGGCAACTACTTATGCGTTAAATGAAGTCTCACAAATAGTGTCTACCCTTAAAAGCTTCGAACACATCGAGTATATTGTAGTTAGTTGTCCATGTTAAGTAAAGTGACCTTTTGTATTTAGTTGATTTTGTGGGTTCAGTAGCTGACTGATGAAAAAGGAGTTAGCCAATTTTCAAAGAAGCTGCATTAAATTGTCAATTTTCAATTCCTTTTTTATCCAATCAACTACTTAACTTTGACACTTATGTAGCTAACTGTCAGGCATTCAATCCTTCTCTTATTTATAAGGGGAGGATTGTTTATGAGGTTTTATCAATAGGGATATAATTATAACTTTTAAAACCATAAGGATTAAATCTAACTTTCTCCAAACTATTGGGATCACATTTGTAATTCACCTACTATGTTTTAGTCCTCTGAAGCCTGACAGATTTGAAGGTAAAATCCTGGGATGGCAAGTTGCAATCAATCTAAATTGGGCTGTGGAAATGTGTTTCCATTTGAAAGTGAAAGATCAAGCATTAAAATTTCAATGAATTACTACATTAACCATAAAGATTGGATAGCAAGAGTTAACTACTGATTAAGGTATATTCTCTCGACCAAGGGATCATATATCTATAACTAAATTAAGCTTAACTCATGTGCTTAAGAAATGTACACTTGGTCAAAATGTCCAAAGTGCTCCATATCCCTCCCGTAGAGGTTTCCTGGGTTTGTTGCAGTTGGAAGAGAGGTGCCTCTGATACCAACTTGAGTTATAAAATGAAGGGAATGTACTTCATGTTGCTCAGTGGGCAGAATAAATTATATGAGATTGGAGCTCTTCTTTAGTTTATATGTTGCCATGGTCAATCAGTCGACACCCAATAGGTGAGTGACAAACCAATTCTGTGCACCCTTGTGAATATGATTTCTGCTGTGCCTGGGTCTTAATGCCGTTATAGAGAGTCGTCAGTAGGGAGCTGGTCTGATACTGGCTCAGTTTGTTTGGAATTTTGGAGAAAGTGGTTTACTCGTCTCTCTCTCCTGGTTCTTCCCAGTAACCCCATTCTTTTGCGTGTGTATGAGTGAGCGTGTTTTGGTGTATGCATCTTGATTTGCAGGGGAGCCAACATTTACCTTTTATGTATGGCATGAGATTCTGAGTCATTTACAGCATTTGTTGTTGGTTGTCTTTCCTGCTCACCATTTTTTATTGTTATTATGAATCGTTAATTTGGAATAACAGATGTTTAAGTATAGAAAAACGTTTACCAAATAGTGCATTTAAGCTATACCTTTATATTCTAATATATACACATGCATGAACATATTTATTTTATCTATGAAGATCATGGGGTGGGGACGTCGAAATTTTTAGTTTGAGTATTAAGAATGTGATACTTTCAATTGACTTCGAGTTCAGGCTCTGTATCATAGGTTGTACTGATTCTTGATCACTTGCTTTTGCGATAATTCCTGCAATGTGACAGCACTCAGTTCATGTTAGAACATTCACATAGTAATTTGTTATCCATAAAATAACATTTTAATCTATGTTTTCTTTTGACTCTTCTCTTCCGTCTGACTGATTCACAGATCAGCAATATACCTGCAACTACTTTTTATTTCTCTAACTTTCTTTCCCCCAAAAGAAAACCCTTGTCGAGGTTTAACAAATCACATGTTTCTCGAATGTTGCAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTGGTTTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCGAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATGAGGAAGCTGGGATTGCATCCCAATGTGCTATCAGAAGCATCCCCACTGCCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTCCCAAAACAACTCTGACTGATATCATGGACAAATTCTTGTAGAGATGGCTGATAAAAAGTACGTATTGAAAGAATCAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTATATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTGTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGGCAATTCAATACCTTTTCTATGAATGCATCTTTCTTTTTTGAATT

mRNA sequence

ATGGCTACGGTTCTCGATTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGCGCTTCCGCGCTACAGAGCATTGAAGGTCGGACACAGCTTCACTTCTCATTCTATAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGGCAGAGTCGTCTGCGAAGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTGGTTTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCGAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATGAGGAAGCTGGGATTGCATCCCAATGTGCTATCAGAAGCATCCCCACTGCCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTCCCAAAACAACTCTGACTGATATCATGGACAAATTCTTGTAGAGATGGCTGATAAAAAGTACGTATTGAAAGAATCAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTATATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTGTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGGCAATTCAATACCTTTTCTATGAATGCATCTTTCTTTTTTGAATT

Coding sequence (CDS)

ATGGCTACGGTTCTCGATTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGCGCTTCCGCGCTACAGAGCATTGAAGGTCGGACACAGCTTCACTTCTCATTCTATAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGGCAGAGTCGTCTGCGAAGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTGGTTTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCGAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATGAGGAAGCTGGGATTGCATCCCAATGTGCTATCAGAAGCATCCCCACTGCCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTCCCAAAACAACTCTGACTGATATCATGGACAAATTCTTGTAG

Protein sequence

MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL
BLAST of Cp4.1LG01g08570 vs. Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 6.1e-43
Identity = 92/191 (48.17%), Postives = 127/191 (66.49%), Query Frame = 1

Query: 1   MATVLDS----------LALPSSSVLASTTFSGRRTSLA-LPRYRALKVGHSFTSHSIKS 60
           MA++LDS          +A   SS  A+ + S RR S A    +R LK   S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFTHRSGRVVCEGQETSSI---VPSASEATWQSQVIESGLPVLVEFWAPWCGPCR 120
             +      R GR+ CE Q+T++    VP+ S++ WQ++V+ES +PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPK 178
           MIHP+VD+L++++AGKFKFYK+NTDE    A++  IRS+PT IIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

BLAST of Cp4.1LG01g08570 vs. Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-38
Identity = 77/148 (52.03%), Postives = 108/148 (72.97%), Query Frame = 1

Query: 30  LPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIES 89
           +P +R LK      S S+ S+ S  +F + S  VVC+  E    V   ++++W+  V+ES
Sbjct: 35  VPTFRGLKRSFPALSSSVSSS-SPRQFRYSS--VVCKASEAVKEVQDVNDSSWKEFVLES 94

Query: 90  GLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAI 149
            +PV+V+FWAPWCGPC++I PV+DEL++EY+GK   YK+NTDE  GIA+Q  IRSIPT +
Sbjct: 95  EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVL 154

Query: 150 IFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
            FKNGE+KE+IIGAVPK+TLTD ++K+L
Sbjct: 155 FFKNGERKESIIGAVPKSTLTDSIEKYL 179

BLAST of Cp4.1LG01g08570 vs. Swiss-Prot
Match: TRXM1_ORYSJ (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-38
Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 1

Query: 59  RSGR-----VVC--EGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPV 118
           RSGR     VVC  +GQETS  VP  +++TWQS V+ES LPVLVEFWA WCGPC+MI PV
Sbjct: 46  RSGRARGVSVVCAAQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPV 105

Query: 119 VDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTD 178
           + +LS+EY GK   YK+NTDE   IA+Q  IRSIPT +IFKNGEKK+A+IGAVP++TL  
Sbjct: 106 IGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVS 165

BLAST of Cp4.1LG01g08570 vs. Swiss-Prot
Match: TRXM2_ORYSJ (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-38
Identity = 93/186 (50.00%), Postives = 119/186 (63.98%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLASTTFSGR--RTSLALP-----RYRALKVGHSFTSHSIKSARSN 60
           MA+ L +     SS LAS + S    R   A+P     RY+AL+    F          N
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRYQALRADSGFAG--------N 60

Query: 61  ARFTHRSGRVVC--EGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPV 120
            R   R   VVC  +GQ+TS  VP  +++TWQS V+ES LPVLV +WA WCGPC+MI PV
Sbjct: 61  RRGGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPV 120

Query: 121 VDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTD 178
           V +LS+EY GK K YK+NTDE   IASQ  +RSIPT +IFKNGEKK+A+IGAVP++TL  
Sbjct: 121 VGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIA 178

BLAST of Cp4.1LG01g08570 vs. Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-37
Identity = 78/165 (47.27%), Postives = 109/165 (66.06%), Query Frame = 1

Query: 13  SSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSS 72
           SS  ++++ S RR    LP    L++  S +  S+ S     R +     VVCE QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQ-PRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDE 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTDE
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
                 Q  +RSIPT +IF  GEKK+ IIGAVPKTTLT  +DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

BLAST of Cp4.1LG01g08570 vs. TrEMBL
Match: A0A0A0L5C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-67
Identity = 129/176 (73.30%), Postives = 149/176 (84.66%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSL LP SS LAST FS RRTSL LP+ R LK+ +SFTSHS++SARSNARF HRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
             +VCE QET++IVP+ASEATW+S V ES LPV+VEFWAPWCGPCRM+HP++D+LS+EY 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKF 177
           GKFKFYKV+TD    IAS+  IRSIPT IIFK+GEKKEAIIGAVPK TLT  M+KF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

BLAST of Cp4.1LG01g08570 vs. TrEMBL
Match: E0CSM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02890 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.3e-51
Identity = 109/188 (57.98%), Postives = 134/188 (71.28%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLASTTF-----------SGRRTSLALPRYRALKVGHSFTSHSIKS 60
           MATVLDSLA+P SS L S+ F           SGRR    LP +  LK+  S  S S+ +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 61  ARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIH 120
           A  ++R   R G VVCE QET+  VP+  +ATWQS V+++  PVLVEFWAPWCGPCRMIH
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 121 PVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTL 178
           PV++EL+++Y GK K YKVNTDE   IA++  IRSIPT IIFK+GEKKEAIIGAVPK+TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

BLAST of Cp4.1LG01g08570 vs. TrEMBL
Match: A0A0K9QL86_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166590 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.9e-49
Identity = 102/187 (54.55%), Postives = 132/187 (70.59%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVL----------ASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSA 60
           MA +L+SLA+P S             +S+T S   TSL LP +R LKV    ++ ++ S 
Sbjct: 1   MAILLESLAIPCSLPFPSASLSPISSSSSTPSSLSTSLKLPEFRGLKVSSGCSTRALGSV 60

Query: 61  RSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHP 120
            S AR   R  R+VCE  +T+  +PS +E TW+S V+ES  PV+VEFWAPWCGPCR++ P
Sbjct: 61  TSRARIGRRCSRIVCESSDTTFQLPSVTEETWKSLVLESEFPVIVEFWAPWCGPCRIVQP 120

Query: 121 VVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLT 178
           V+DELS+E+AG+ K +KVNTD+ A IAS+  +RSIPT IIFKNGEKKEAIIGAVPKTTLT
Sbjct: 121 VIDELSKEFAGRLKVFKVNTDDSANIASEYGVRSIPTVIIFKNGEKKEAIIGAVPKTTLT 180

BLAST of Cp4.1LG01g08570 vs. TrEMBL
Match: M5WVD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011915mg PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 112/195 (57.44%), Postives = 133/195 (68.21%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLAST-------------TFSGRRTSLALPRYRALKVGHSFTSHSI 60
           MATVLDSL +P SS L S+             + SGR     L  YR LKVG +  + SI
Sbjct: 1   MATVLDSLVVPRSSALPSSAALSPIAAASSVSSLSGRS---GLRHYRGLKVGSALRTRSI 60

Query: 61  KS-----ARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWC 120
            S     A   AR   R G VVCE Q+T+  VP  ++ATWQS V+ES  PVLVEFWAPWC
Sbjct: 61  GSLSYGPAAGGARH-RRGGLVVCEAQDTAVEVPPVTDATWQSLVLESDSPVLVEFWAPWC 120

Query: 121 GPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIG 178
           GPCRMIHP++DEL+++YAGK K YKVNTDE A IA+Q  IRSIPT IIFK GEKK+A+IG
Sbjct: 121 GPCRMIHPIIDELAKQYAGKLKCYKVNTDEGAAIATQYGIRSIPTVIIFKGGEKKDAVIG 180

BLAST of Cp4.1LG01g08570 vs. TrEMBL
Match: A0A0J8BDD0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096860 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.9e-47
Identity = 91/165 (55.15%), Postives = 125/165 (75.76%), Query Frame = 1

Query: 13  SSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSS 72
           S +  S++ S   +SL LP +R LKV +  ++ +++S  S ++   RS R+VC+  E++ 
Sbjct: 22  SPISTSSSSSSLSSSLKLPEFRGLKVSYGVSTRAVRSLSSRSKIVPRSSRIVCDSSESTL 81

Query: 73  IVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDE 132
            +PSA+E TW+S V+ES LPV+VEFWAPWCGPCR++ PV+DELS+++AGK K +KVNTD+
Sbjct: 82  QLPSATEETWKSLVLESDLPVMVEFWAPWCGPCRIVEPVIDELSKDFAGKIKVFKVNTDD 141

Query: 133 EAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
              IAS   +RSIPT IIFKNGEKKEAIIGAVPK+TLT  ++KFL
Sbjct: 142 SPTIASDYGVRSIPTVIIFKNGEKKEAIIGAVPKSTLTSSIEKFL 186

BLAST of Cp4.1LG01g08570 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4)

HSP 1 Score: 175.3 bits (443), Expect = 3.4e-44
Identity = 92/191 (48.17%), Postives = 127/191 (66.49%), Query Frame = 1

Query: 1   MATVLDS----------LALPSSSVLASTTFSGRRTSLA-LPRYRALKVGHSFTSHSIKS 60
           MA++LDS          +A   SS  A+ + S RR S A    +R LK   S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFTHRSGRVVCEGQETSSI---VPSASEATWQSQVIESGLPVLVEFWAPWCGPCR 120
             +      R GR+ CE Q+T++    VP+ S++ WQ++V+ES +PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPK 178
           MIHP+VD+L++++AGKFKFYK+NTDE    A++  IRS+PT IIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

BLAST of Cp4.1LG01g08570 vs. TAIR10
Match: AT4G03520.1 (AT4G03520.1 Thioredoxin superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 5.7e-39
Identity = 78/165 (47.27%), Postives = 109/165 (66.06%), Query Frame = 1

Query: 13  SSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSS 72
           SS  ++++ S RR    LP    L++  S +  S+ S     R +     VVCE QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQ-PRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDE 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTDE
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
                 Q  +RSIPT +IF  GEKK+ IIGAVPKTTLT  +DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

BLAST of Cp4.1LG01g08570 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1)

HSP 1 Score: 156.4 bits (394), Expect = 1.7e-38
Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 1

Query: 20  TFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSSIVPSASE 79
           +FS R+    LP    L+     T  S+ S   N+R +     V+CE Q+T++ +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQ 139
           +TW S V+++  PV V+FWAPWCGPC+MI P+V+EL+++YAG+FKFYK+NTDE      Q
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 CAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
             +RSIPT +IF NGEKK+ IIGAV K TL   ++KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

BLAST of Cp4.1LG01g08570 vs. TAIR10
Match: AT2G15570.2 (AT2G15570.2 Thioredoxin superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 42/107 (39.25%), Postives = 71/107 (66.36%), Query Frame = 1

Query: 71  SSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNT 130
           S      ++ +W+  V++S  PVLVEF+  WCGPCRM+H ++DE++ +YAGK   Y +N 
Sbjct: 66  SRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNA 125

Query: 131 DEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
           D +  +A +  I+++P  ++FKNGEK+E+I+G +PK      +++ L
Sbjct: 126 DNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

BLAST of Cp4.1LG01g08570 vs. TAIR10
Match: AT1G50320.1 (AT1G50320.1 thioredoxin X)

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16
Identity = 49/156 (31.41%), Postives = 82/156 (52.56%), Query Frame = 1

Query: 26  TSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVV--CEGQETSSIVPSASEATWQ 85
           TS+++    +++V     +  + S  S AR T +S   V  C G      +    E+ + 
Sbjct: 27  TSVSVKPLSSVQVTSVAANRHLLSLSSGARRTRKSSSSVIRCGG------IKEIGESEFS 86

Query: 86  SQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIR 145
           S V+ES  PVLVEF A WCGPC++I+P ++ LS+EY  K    K++ D    + ++  + 
Sbjct: 87  STVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVY 146

Query: 146 SIPTAIIFKNGEKKEAI--IGAVPKTTLTDIMDKFL 178
            +P  I+FK+G++       GA+ K  L + +D  L
Sbjct: 147 GLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: gi|449431838|ref|XP_004133707.1| (PREDICTED: thioredoxin-like [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 2.7e-67
Identity = 129/176 (73.30%), Postives = 149/176 (84.66%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSL LP SS LAST FS RRTSL LP+ R LK+ +SFTSHS++SARSNARF HRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
             +VCE QET++IVP+ASEATW+S V ES LPV+VEFWAPWCGPCRM+HP++D+LS+EY 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKF 177
           GKFKFYKV+TD    IAS+  IRSIPT IIFK+GEKKEAIIGAVPK TLT  M+KF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: gi|359493854|ref|XP_002282265.2| (PREDICTED: thioredoxin M4, chloroplastic [Vitis vinifera])

HSP 1 Score: 209.5 bits (532), Expect = 4.7e-51
Identity = 109/188 (57.98%), Postives = 134/188 (71.28%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLASTTF-----------SGRRTSLALPRYRALKVGHSFTSHSIKS 60
           MATVLDSLA+P SS L S+ F           SGRR    LP +  LK+  S  S S+ +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 61  ARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIH 120
           A  ++R   R G VVCE QET+  VP+  +ATWQS V+++  PVLVEFWAPWCGPCRMIH
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 121 PVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTL 178
           PV++EL+++Y GK K YKVNTDE   IA++  IRSIPT IIFK+GEKKEAIIGAVPK+TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: gi|697148344|ref|XP_009628353.1| (PREDICTED: thioredoxin-like [Nicotiana tomentosiformis])

HSP 1 Score: 206.8 bits (525), Expect = 3.0e-50
Identity = 106/186 (56.99%), Postives = 138/186 (74.19%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLAST---------TFSGRRTSLALPRYRALKVGHSFTSHSIKSAR 60
           MA VL+++A+P +S L+S          +FSGRR+S+   ++R LKV  S +  S+ S  
Sbjct: 1   MAGVLETIAVPRASALSSARLAPIADSNSFSGRRSSVNFSQFRGLKVQQSRSPVSLSSTS 60

Query: 61  SNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPV 120
            + R   R GR+VCE QET+  VP+ ++ TW+S VIES LPVLVEFWAPWCGPCRMIHPV
Sbjct: 61  YSVR---RGGRIVCEAQETAVQVPAVTDKTWKSLVIESDLPVLVEFWAPWCGPCRMIHPV 120

Query: 121 VDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTD 178
           + ELS+EYAGKFKF+++NTDE    AS+  IRSIPT +IFK+GEKK+A+IGAVPKTTLT 
Sbjct: 121 IGELSQEYAGKFKFFQLNTDESPSTASEYGIRSIPTVMIFKDGEKKDAVIGAVPKTTLTT 180

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: gi|1009170265|ref|XP_015866106.1| (PREDICTED: thioredoxin-1 [Ziziphus jujuba])

HSP 1 Score: 205.3 bits (521), Expect = 8.8e-50
Identity = 105/188 (55.85%), Postives = 135/188 (71.81%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLASTTFS-----------GRRTSLALPRYRALKVGHSFTSHSIKS 60
           MATVL+SLA+P  S L S T S           GRR    L ++R L++ HS  + S+ S
Sbjct: 1   MATVLESLAVPRCSALPSNTLSPVAASSISSPSGRRR---LSQFRGLQLRHSLVTRSLGS 60

Query: 61  ARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIH 120
               +R + R G +VCE QET+  VP+ ++A+W+S V+ES  PVLVEFWAPWCGPCRMIH
Sbjct: 61  VSFGSRGSRRGGLIVCEAQETAVQVPAVTDASWKSSVLESDFPVLVEFWAPWCGPCRMIH 120

Query: 121 PVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTL 178
           P++D+L+++YAGK K YKVNTDE   IA+Q  IRSIPT IIFK+GEKK+AIIGAVPK+TL
Sbjct: 121 PIIDDLAKQYAGKLKCYKVNTDESPSIATQYGIRSIPTVIIFKDGEKKDAIIGAVPKSTL 180

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: gi|657987986|ref|XP_008386162.1| (PREDICTED: thioredoxin M4, chloroplastic [Malus domestica])

HSP 1 Score: 202.2 bits (513), Expect = 7.5e-49
Identity = 105/190 (55.26%), Postives = 133/190 (70.00%), Query Frame = 1

Query: 1   MATVLDSLALPSSSVLAST----------TFSGRRTSLALPRYRALKVGHSFTSHSIKSA 60
           MATVL S+ +P SS L S+          + S       LPRYR LKVG +  + S+ S 
Sbjct: 1   MATVLXSVVVPRSSALPSSAALSRIPAPSSLSSLSAGARLPRYRGLKVGSALRTRSVGSL 60

Query: 61  R---SNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRM 120
               ++   + R G VVCE Q+T+  VP+ S+ATWQS V++S  PVLVEFWAPWCGPCRM
Sbjct: 61  SYGPASGXASRRGGLVVCEAQDTAVEVPAVSDATWQSLVLDSEYPVLVEFWAPWCGPCRM 120

Query: 121 IHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKT 178
           IHP++DEL+++YAGK K YKVNTDE A IA++  IRSIPT IIFK GEKK+A+IGAVPK+
Sbjct: 121 IHPIIDELAKQYAGKLKCYKVNTDESASIATRYGIRSIPTVIIFKGGEKKDAVIGAVPKS 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TRXM4_ARATH6.1e-4348.17Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2[more]
TRXM_SPIOL1.6e-3852.03Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2[more]
TRXM1_ORYSJ2.0e-3861.90Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE... [more]
TRXM2_ORYSJ3.5e-3850.00Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE... [more]
TRXM2_ARATH1.0e-3747.27Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0L5C6_CUCSA1.9e-6773.30Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1[more]
E0CSM0_VITVI3.3e-5157.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02890 PE=4 SV=... [more]
A0A0K9QL86_SPIOL8.9e-4954.55Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166590 PE=4 SV=1[more]
M5WVD9_PRUPE2.0e-4857.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011915mg PE=4 SV=1[more]
A0A0J8BDD0_BETVU2.9e-4755.15Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096860 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G15360.13.4e-4448.17 thioredoxin M-type 4[more]
AT4G03520.15.7e-3947.27 Thioredoxin superfamily protein[more]
AT1G03680.11.7e-3847.47 thioredoxin M-type 1[more]
AT2G15570.21.8e-2439.25 Thioredoxin superfamily protein[more]
AT1G50320.13.0e-1631.41 thioredoxin X[more]
Match NameE-valueIdentityDescription
gi|449431838|ref|XP_004133707.1|2.7e-6773.30PREDICTED: thioredoxin-like [Cucumis sativus][more]
gi|359493854|ref|XP_002282265.2|4.7e-5157.98PREDICTED: thioredoxin M4, chloroplastic [Vitis vinifera][more]
gi|697148344|ref|XP_009628353.1|3.0e-5056.99PREDICTED: thioredoxin-like [Nicotiana tomentosiformis][more]
gi|1009170265|ref|XP_015866106.1|8.8e-5055.85PREDICTED: thioredoxin-1 [Ziziphus jujuba][more]
gi|657987986|ref|XP_008386162.1|7.5e-4955.26PREDICTED: thioredoxin M4, chloroplastic [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR017937Thioredoxin_CS
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
IPR005746Thioredoxin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006109 regulation of carbohydrate metabolic process
biological_process GO:0009735 response to cytokinin
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005618 cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008047 enzyme activator activity
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0019904 protein domain specific binding
molecular_function GO:0004791 thioredoxin-disulfide reductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08570.1Cp4.1LG01g08570.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 18..177
score: 2.8
IPR005746ThioredoxinTIGRFAMsTIGR01068TIGR01068coord: 79..176
score: 5.2
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 68..176
score: 3.9
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 74..177
score: 6.4
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 76..175
score: 4.4
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 68..177
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 94..112
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 141..152
score: 8.6E-8coord: 93..101
score: 8.6E-8coord: 101..110
score: 8.
NoneNo IPR availablePANTHERPTHR10438:SF300THIOREDOXIN M1, CHLOROPLASTIC-RELATEDcoord: 18..177
score: 2.8