CmaCh04G009060 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAATTTTGCCCAGGACCTTCACGCTTTCTCGCCTCGCACTCACAGCTACCGTTCTCTCTAATTCCTTCCTCCCATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGGTTCGGATTTTGTTCTGTTGTTTTCTTTTATTGTGTTGTTTGGCTTTTGGGAGAAGGGAAGAAAGGAAAATTTAGGACACTTGTAAGTTTGGTGAATTGATGAAGATCATACTCTTGAGTATCTATTGGTGTTTGGTTTGGTTTTGATAAAAGTTGAAACTAAACTGTATAATTAACAAATAGTAGGTTAGATCATTACTAGAGTTATATGCGGCAACTACTTGTGCGTTAAATGAAGTCTCACAAATAGTGTCTACCATTAAAAGCTTCGAACACATCGAGTATATTGTAGTTGTCCATGTTAAGTGAAGTGACCTCTTGTATTTAGTTGATTTTGTGGGTTCAGTAGCTGACTGATGAAAAAGGAGTTGGCCAATTTTCAAAGAAGCTGCATTAAATTGTCAATTTTCAATTCCTTTTTTATCCAATCAACTACTTAACTTTGACAGGTAGCTAACTGTCAGGCATTCAATCCTTCTCTTATTTATAAGGGGAGGATTGTTTATGAGGTTTTATCAATAGGGATATAATTATAACTTTTAAAACCATAAGGATTAAATCTAACTTTCTCCAAACTATTGGGATCACATTTGTAATTCACCTACTATGTTTTAGTCCTCTGAAGCCTGACAGATTTGAAGGTAAAATCCTGGGATGGCAAGTTGCAATCAATCTAAATTGGGCTGTGGAAATGTGTTTCCATTTGAAAGTGAAAGATCAAGCATTAAAATTTCAAATGAATTACTACATTAACCATAAAGATTGGATAGCAAGAGTTAACTACTGATTAAGGTATATTCTCTCGACCAAGAGATCATATATCTATAACTAAATTATGCTTAACTCATGTGCTTAAGATATGTACACTTGGTCATAATGTCCAAAGTGCTCCATATCCCTCCCGTAGAGGTTTTCTGGGTTTGTTGCAGTTGGAAGAGAGGTGCCTCTGATACCAACTTAAGTTATAAAATGAAGGGAATGTACTTAATGTTGCTCAGTGGGCAAAATAAATTATATGTGATTGGAGCTCTTCTTTAGTTTATATGTTGCCATGGTCAATCAGTGGACACCCAATAGGTGAGTGACAAACCAATTCTCTGCACCCTTGTGAATATGATTTCTGCTGTGCCTGGGTCTTATGCCGTTATAGAGAGTCGTCAGTAGGGAGCTGGTCTGATACTGGCTCAGTTTGTTTGGAATTTTGGAGAAAGTGGTTTACTCGTCTCTCTCTCCTGGTTCTTCCCGGTAACCCCATTCTTTTGCGTGTGTATGAGTGAGCATGTTTTGGTGTATGCATCTTGATTTGCAGGGGAGCCAACATTTACCTTTTATGTATGGCATGAGATTCTGAGTCATTTACAGCATTTGTTGTTGGTTGTCTTTCCTGCACACCATTTTTTATTGTTATTATGAATCGTTAATTTGGAATAACAGATGTTTAAGTATAGAAAAACGTTTACCAAATAGTGCATTTAAGCTATACCTTTATATTCTAATATATACACATGCATGAACATATTTATTTTATCTATGAAGATCATGGGGTGGGGACGTCGAAATATTTAGTTTTGAGTATTAAGAATGTGATACTTTCAATTGACTTTGAGTTCAGGCTCTGTATCATTGGTTGTACTGATTCTTGATCACTTGCCTTTGGGATAATTCCTGCAGTGTGACAGCACTCAGTTCATGTTAGAACATTCACATAGGAATTTGTTATCCATAAAATAACATTTTAATCTATATTTTCTTTTGACTCTTCTCTTCCGTCTGACTGATTCTCAGATCAGCAATATACCTGCAACTACTTTTTATTTCTCTAACTTTCTTCCCCCCAAAAGAAAGCCCTTGTCGAGGTTTAACAAATCACATGTTTCTCGAATGTTGCAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAGAGATGGGTGATAAAAAAGTACGTATAGAAAGAATAAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTAAATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGTTTATTGCCACAATACCTTTTCTATGAATGCATCTTTTTTTTTTTTT CAAATTTTGCCCAGGACCTTCACGCTTTCTCGCCTCGCACTCACAGCTACCGTTCTCTCTAATTCCTTCCTCCCATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAGAGATGGGTGATAAAAAAGTACGTATAGAAAGAATAAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTAAATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGTTTATTGCCACAATACCTTTTCTATGAATGCATCTTTTTTTTTTTTT ATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAG MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL
BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2) HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42 Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 1
BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM2_ORYSJ (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE=2 SV=2) HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38 Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 1
BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 2.0e-38 Identity = 78/148 (52.70%), Postives = 108/148 (72.97%), Query Frame = 1
BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38 Identity = 74/158 (46.84%), Postives = 111/158 (70.25%), Query Frame = 1
BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2) HSP 1 Score: 158.7 bits (400), Expect = 5.9e-38 Identity = 77/165 (46.67%), Postives = 112/165 (67.88%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TrEMBL
Match: A0A0A0L5C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-67 Identity = 130/176 (73.86%), Postives = 151/176 (85.80%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TrEMBL
Match: E0CSM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02890 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.6e-50 Identity = 110/188 (58.51%), Postives = 134/188 (71.28%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TrEMBL
Match: A0A0K9QL86_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166590 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48 Identity = 102/187 (54.55%), Postives = 131/187 (70.05%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TrEMBL
Match: A0A0J8BDD0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096860 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 5.8e-48 Identity = 93/165 (56.36%), Postives = 126/165 (76.36%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TrEMBL
Match: M5WVD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011915mg PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 4.1e-46 Identity = 107/195 (54.87%), Postives = 133/195 (68.21%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4) HSP 1 Score: 174.1 bits (440), Expect = 7.7e-44 Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1) HSP 1 Score: 159.1 bits (401), Expect = 2.6e-39 Identity = 74/158 (46.84%), Postives = 111/158 (70.25%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TAIR10
Match: AT4G03520.1 (AT4G03520.1 Thioredoxin superfamily protein) HSP 1 Score: 158.7 bits (400), Expect = 3.3e-39 Identity = 77/165 (46.67%), Postives = 112/165 (67.88%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TAIR10
Match: AT2G15570.2 (AT2G15570.2 Thioredoxin superfamily protein) HSP 1 Score: 111.7 bits (278), Expect = 4.7e-25 Identity = 44/107 (41.12%), Postives = 72/107 (67.29%), Query Frame = 1
BLAST of CmaCh04G009060 vs. TAIR10
Match: AT1G50320.1 (AT1G50320.1 thioredoxin X) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 49/156 (31.41%), Postives = 83/156 (53.21%), Query Frame = 1
BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|449431838|ref|XP_004133707.1| (PREDICTED: thioredoxin-like [Cucumis sativus]) HSP 1 Score: 264.2 bits (674), Expect = 1.6e-67 Identity = 130/176 (73.86%), Postives = 151/176 (85.80%), Query Frame = 1
BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|359493854|ref|XP_002282265.2| (PREDICTED: thioredoxin M4, chloroplastic [Vitis vinifera]) HSP 1 Score: 207.2 bits (526), Expect = 2.3e-50 Identity = 110/188 (58.51%), Postives = 134/188 (71.28%), Query Frame = 1
BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|657987986|ref|XP_008386162.1| (PREDICTED: thioredoxin M4, chloroplastic [Malus domestica]) HSP 1 Score: 202.6 bits (514), Expect = 5.7e-49 Identity = 105/190 (55.26%), Postives = 134/190 (70.53%), Query Frame = 1
BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|658029089|ref|XP_008349985.1| (PREDICTED: thioredoxin M4, chloroplastic-like [Malus domestica]) HSP 1 Score: 200.7 bits (509), Expect = 2.2e-48 Identity = 104/190 (54.74%), Postives = 133/190 (70.00%), Query Frame = 1
BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|902171525|gb|KNA08009.1| (hypothetical protein SOVF_166590 [Spinacia oleracea]) HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48 Identity = 102/187 (54.55%), Postives = 131/187 (70.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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