CmaCh04G009060 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G009060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionThioredoxin
LocationCma_Chr04 : 4711490 .. 4714195 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTTTGCCCAGGACCTTCACGCTTTCTCGCCTCGCACTCACAGCTACCGTTCTCTCTAATTCCTTCCTCCCATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGGTTCGGATTTTGTTCTGTTGTTTTCTTTTATTGTGTTGTTTGGCTTTTGGGAGAAGGGAAGAAAGGAAAATTTAGGACACTTGTAAGTTTGGTGAATTGATGAAGATCATACTCTTGAGTATCTATTGGTGTTTGGTTTGGTTTTGATAAAAGTTGAAACTAAACTGTATAATTAACAAATAGTAGGTTAGATCATTACTAGAGTTATATGCGGCAACTACTTGTGCGTTAAATGAAGTCTCACAAATAGTGTCTACCATTAAAAGCTTCGAACACATCGAGTATATTGTAGTTGTCCATGTTAAGTGAAGTGACCTCTTGTATTTAGTTGATTTTGTGGGTTCAGTAGCTGACTGATGAAAAAGGAGTTGGCCAATTTTCAAAGAAGCTGCATTAAATTGTCAATTTTCAATTCCTTTTTTATCCAATCAACTACTTAACTTTGACAGGTAGCTAACTGTCAGGCATTCAATCCTTCTCTTATTTATAAGGGGAGGATTGTTTATGAGGTTTTATCAATAGGGATATAATTATAACTTTTAAAACCATAAGGATTAAATCTAACTTTCTCCAAACTATTGGGATCACATTTGTAATTCACCTACTATGTTTTAGTCCTCTGAAGCCTGACAGATTTGAAGGTAAAATCCTGGGATGGCAAGTTGCAATCAATCTAAATTGGGCTGTGGAAATGTGTTTCCATTTGAAAGTGAAAGATCAAGCATTAAAATTTCAAATGAATTACTACATTAACCATAAAGATTGGATAGCAAGAGTTAACTACTGATTAAGGTATATTCTCTCGACCAAGAGATCATATATCTATAACTAAATTATGCTTAACTCATGTGCTTAAGATATGTACACTTGGTCATAATGTCCAAAGTGCTCCATATCCCTCCCGTAGAGGTTTTCTGGGTTTGTTGCAGTTGGAAGAGAGGTGCCTCTGATACCAACTTAAGTTATAAAATGAAGGGAATGTACTTAATGTTGCTCAGTGGGCAAAATAAATTATATGTGATTGGAGCTCTTCTTTAGTTTATATGTTGCCATGGTCAATCAGTGGACACCCAATAGGTGAGTGACAAACCAATTCTCTGCACCCTTGTGAATATGATTTCTGCTGTGCCTGGGTCTTATGCCGTTATAGAGAGTCGTCAGTAGGGAGCTGGTCTGATACTGGCTCAGTTTGTTTGGAATTTTGGAGAAAGTGGTTTACTCGTCTCTCTCTCCTGGTTCTTCCCGGTAACCCCATTCTTTTGCGTGTGTATGAGTGAGCATGTTTTGGTGTATGCATCTTGATTTGCAGGGGAGCCAACATTTACCTTTTATGTATGGCATGAGATTCTGAGTCATTTACAGCATTTGTTGTTGGTTGTCTTTCCTGCACACCATTTTTTATTGTTATTATGAATCGTTAATTTGGAATAACAGATGTTTAAGTATAGAAAAACGTTTACCAAATAGTGCATTTAAGCTATACCTTTATATTCTAATATATACACATGCATGAACATATTTATTTTATCTATGAAGATCATGGGGTGGGGACGTCGAAATATTTAGTTTTGAGTATTAAGAATGTGATACTTTCAATTGACTTTGAGTTCAGGCTCTGTATCATTGGTTGTACTGATTCTTGATCACTTGCCTTTGGGATAATTCCTGCAGTGTGACAGCACTCAGTTCATGTTAGAACATTCACATAGGAATTTGTTATCCATAAAATAACATTTTAATCTATATTTTCTTTTGACTCTTCTCTTCCGTCTGACTGATTCTCAGATCAGCAATATACCTGCAACTACTTTTTATTTCTCTAACTTTCTTCCCCCCAAAAGAAAGCCCTTGTCGAGGTTTAACAAATCACATGTTTCTCGAATGTTGCAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAGAGATGGGTGATAAAAAAGTACGTATAGAAAGAATAAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTAAATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGTTTATTGCCACAATACCTTTTCTATGAATGCATCTTTTTTTTTTTTT

mRNA sequence

CAAATTTTGCCCAGGACCTTCACGCTTTCTCGCCTCGCACTCACAGCTACCGTTCTCTCTAATTCCTTCCTCCCATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAGAGATGGGTGATAAAAAAGTACGTATAGAAAGAATAAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTAAATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGTTTATTGCCACAATACCTTTTCTATGAATGCATCTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGCTACGGTTCTCGGTTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGTGCTTCCGCGCTACAGAGCATTGAAGATCGGACACAGCTTCACTTCCCATTCTGTAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGACAGAGTCGTCTGCGACGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTCGTGTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCAAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATCAGGAAGCTGAGATTGCATCCCGATATGCTATCAGAAGCGTCCCCACTGTCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTACCAAAACAACTCTGACTGACAGCATGGACAAATTCTTGTAG

Protein sequence

MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL
BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 1

Query: 8   LALPSSSVLASTTFSGRRTSLV-LPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCD 67
           +A   SS  A+ + S RR S      +R LK   S  + S     +      R  R+ C+
Sbjct: 18  IAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACE 77

Query: 68  GQETSSI---VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKF 127
            Q+T++    VP+ S++ WQ++V+ES VPVLVEFWAPWCGPCRMIHP+VD+L+K++AGKF
Sbjct: 78  AQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKF 137

Query: 128 KFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           KFYK+NTD+    A+RY IRSVPTVIIFK GEKK++IIGAV + TL  ++++FL
Sbjct: 138 KFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM2_ORYSJ (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLASTTFSG---RRTSLVLP----RYRALKIGHSFTSHSVKSARSN 60
           MA+ L +     SS LAS + S    RR   V P    RY+AL+    F          N
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRYQALRADSGFAG--------N 60

Query: 61  ARFTHRSDRVVC--DGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPV 120
            R   R   VVC   GQ+TS  VP  +++TWQS V+ES +PVLV +WA WCGPC+MI PV
Sbjct: 61  RRGGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPV 120

Query: 121 VDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTD 178
           V +LSKEY GK K YK+NTD+  +IAS+Y +RS+PT++IFKNGEKK+A+IGAV ++TL  
Sbjct: 121 VGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIA 178

BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-38
Identity = 78/148 (52.70%), Postives = 108/148 (72.97%), Query Frame = 1

Query: 30  LPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIES 89
           +P +R LK      S SV S+ S  +F + S  VVC   E    V   ++++W+  V+ES
Sbjct: 35  VPTFRGLKRSFPALSSSVSSS-SPRQFRYSS--VVCKASEAVKEVQDVNDSSWKEFVLES 94

Query: 90  RVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVI 149
            VPV+V+FWAPWCGPC++I PV+DEL+KEY+GK   YK+NTD+   IA++Y IRS+PTV+
Sbjct: 95  EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVL 154

Query: 150 IFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
            FKNGE+KE+IIGAV K+TLTDS++K+L
Sbjct: 155 FFKNGERKESIIGAVPKSTLTDSIEKYL 179

BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38
Identity = 74/158 (46.84%), Postives = 111/158 (70.25%), Query Frame = 1

Query: 20  TFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASE 79
           +FS R+   VLP    L+     T  S+ S   N+R +     V+C+ Q+T++ +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASR 139
           +TW S V+++  PV V+FWAPWCGPC+MI P+V+EL+++YAG+FKFYK+NTD+      +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           Y +RS+PT++IF NGEKK+ IIGAV+K TL  S++KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

BLAST of CmaCh04G009060 vs. Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 5.9e-38
Identity = 77/165 (46.67%), Postives = 112/165 (67.88%), Query Frame = 1

Query: 13  SSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSS 72
           SS  ++++ S RR   VLP    L+I  S +  S+ S     R +     VVC+ QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQ-PRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQ 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTD+
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
                 +Y +RS+PT++IF  GEKK+ IIGAV KTTLT S+DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

BLAST of CmaCh04G009060 vs. TrEMBL
Match: A0A0A0L5C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-67
Identity = 130/176 (73.86%), Postives = 151/176 (85.80%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SL LP SS LAST FS RRTSL LP+ R LKI +SFTSHS++SARSNARF HRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
             +VC+ QET++IVP+ASEATW+S V ES++PV+VEFWAPWCGPCRM+HP++D+LSKEY 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKF 177
           GKFKFYKV+TD    IASRY IRS+PTVIIFK+GEKKEAIIGAV K TLT SM+KF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

BLAST of CmaCh04G009060 vs. TrEMBL
Match: E0CSM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02890 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.6e-50
Identity = 110/188 (58.51%), Postives = 134/188 (71.28%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLASTTF-----------SGRRTSLVLPRYRALKIGHSFTSHSVKS 60
           MATVL SLA+P SS L S+ F           SGRR    LP +  LKI  S  S SV +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 61  ARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIH 120
           A  ++R   R   VVC+ QET+  VP+  +ATWQS V+++  PVLVEFWAPWCGPCRMIH
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 121 PVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTL 178
           PV++EL+K+Y GK K YKVNTD+   IA+RY IRS+PTVIIFK+GEKKEAIIGAV K+TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

BLAST of CmaCh04G009060 vs. TrEMBL
Match: A0A0K9QL86_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166590 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 102/187 (54.55%), Postives = 131/187 (70.05%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVL----------ASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSA 60
           MA +L SLA+P S             +S+T S   TSL LP +R LK+    ++ ++ S 
Sbjct: 1   MAILLESLAIPCSLPFPSASLSPISSSSSTPSSLSTSLKLPEFRGLKVSSGCSTRALGSV 60

Query: 61  RSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHP 120
            S AR   R  R+VC+  +T+  +PS +E TW+S V+ES  PV+VEFWAPWCGPCR++ P
Sbjct: 61  TSRARIGRRCSRIVCESSDTTFQLPSVTEETWKSLVLESEFPVIVEFWAPWCGPCRIVQP 120

Query: 121 VVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLT 178
           V+DELSKE+AG+ K +KVNTD  A IAS Y +RS+PTVIIFKNGEKKEAIIGAV KTTLT
Sbjct: 121 VIDELSKEFAGRLKVFKVNTDDSANIASEYGVRSIPTVIIFKNGEKKEAIIGAVPKTTLT 180

BLAST of CmaCh04G009060 vs. TrEMBL
Match: A0A0J8BDD0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096860 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.8e-48
Identity = 93/165 (56.36%), Postives = 126/165 (76.36%), Query Frame = 1

Query: 13  SSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSS 72
           S +  S++ S   +SL LP +R LK+ +  ++ +V+S  S ++   RS R+VCD  E++ 
Sbjct: 22  SPISTSSSSSSLSSSLKLPEFRGLKVSYGVSTRAVRSLSSRSKIVPRSSRIVCDSSESTL 81

Query: 73  IVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQ 132
            +PSA+E TW+S V+ES +PV+VEFWAPWCGPCR++ PV+DELSK++AGK K +KVNTD 
Sbjct: 82  QLPSATEETWKSLVLESDLPVMVEFWAPWCGPCRIVEPVIDELSKDFAGKIKVFKVNTDD 141

Query: 133 EAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
              IAS Y +RS+PTVIIFKNGEKKEAIIGAV K+TLT S++KFL
Sbjct: 142 SPTIASDYGVRSIPTVIIFKNGEKKEAIIGAVPKSTLTSSIEKFL 186

BLAST of CmaCh04G009060 vs. TrEMBL
Match: M5WVD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011915mg PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.1e-46
Identity = 107/195 (54.87%), Postives = 133/195 (68.21%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLAST-------------TFSGRRTSLVLPRYRALKIGHSFTSHSV 60
           MATVL SL +P SS L S+             + SGR     L  YR LK+G +  + S+
Sbjct: 1   MATVLDSLVVPRSSALPSSAALSPIAAASSVSSLSGRSG---LRHYRGLKVGSALRTRSI 60

Query: 61  KS-----ARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWC 120
            S     A   AR   R   VVC+ Q+T+  VP  ++ATWQS V+ES  PVLVEFWAPWC
Sbjct: 61  GSLSYGPAAGGARH-RRGGLVVCEAQDTAVEVPPVTDATWQSLVLESDSPVLVEFWAPWC 120

Query: 121 GPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIG 178
           GPCRMIHP++DEL+K+YAGK K YKVNTD+ A IA++Y IRS+PTVIIFK GEKK+A+IG
Sbjct: 121 GPCRMIHPIIDELAKQYAGKLKCYKVNTDEGAAIATQYGIRSIPTVIIFKGGEKKDAVIG 180

BLAST of CmaCh04G009060 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4)

HSP 1 Score: 174.1 bits (440), Expect = 7.7e-44
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 1

Query: 8   LALPSSSVLASTTFSGRRTSLV-LPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCD 67
           +A   SS  A+ + S RR S      +R LK   S  + S     +      R  R+ C+
Sbjct: 18  IAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACE 77

Query: 68  GQETSSI---VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKF 127
            Q+T++    VP+ S++ WQ++V+ES VPVLVEFWAPWCGPCRMIHP+VD+L+K++AGKF
Sbjct: 78  AQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKF 137

Query: 128 KFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           KFYK+NTD+    A+RY IRSVPTVIIFK GEKK++IIGAV + TL  ++++FL
Sbjct: 138 KFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

BLAST of CmaCh04G009060 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1)

HSP 1 Score: 159.1 bits (401), Expect = 2.6e-39
Identity = 74/158 (46.84%), Postives = 111/158 (70.25%), Query Frame = 1

Query: 20  TFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSSIVPSASE 79
           +FS R+   VLP    L+     T  S+ S   N+R +     V+C+ Q+T++ +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASR 139
           +TW S V+++  PV V+FWAPWCGPC+MI P+V+EL+++YAG+FKFYK+NTD+      +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           Y +RS+PT++IF NGEKK+ IIGAV+K TL  S++KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

BLAST of CmaCh04G009060 vs. TAIR10
Match: AT4G03520.1 (AT4G03520.1 Thioredoxin superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 3.3e-39
Identity = 77/165 (46.67%), Postives = 112/165 (67.88%), Query Frame = 1

Query: 13  SSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVVCDGQETSS 72
           SS  ++++ S RR   VLP    L+I  S +  S+ S     R +     VVC+ QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQ-PRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQ 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTD+
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
                 +Y +RS+PT++IF  GEKK+ IIGAV KTTLT S+DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

BLAST of CmaCh04G009060 vs. TAIR10
Match: AT2G15570.2 (AT2G15570.2 Thioredoxin superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 4.7e-25
Identity = 44/107 (41.12%), Postives = 72/107 (67.29%), Query Frame = 1

Query: 71  SSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNT 130
           S      ++ +W+  V++S  PVLVEF+  WCGPCRM+H ++DE++ +YAGK   Y +N 
Sbjct: 66  SRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNA 125

Query: 131 DQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 178
           D +  +A  Y I++VP V++FKNGEK+E+I+G + K     ++++ L
Sbjct: 126 DNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

BLAST of CmaCh04G009060 vs. TAIR10
Match: AT1G50320.1 (AT1G50320.1 thioredoxin X)

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16
Identity = 49/156 (31.41%), Postives = 83/156 (53.21%), Query Frame = 1

Query: 26  TSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRSDRVV--CDGQETSSIVPSASEATWQ 85
           TS+ +    ++++     +  + S  S AR T +S   V  C G      +    E+ + 
Sbjct: 27  TSVSVKPLSSVQVTSVAANRHLLSLSSGARRTRKSSSSVIRCGG------IKEIGESEFS 86

Query: 86  SQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIR 145
           S V+ES  PVLVEF A WCGPC++I+P ++ LS+EY  K    K++ D   ++ + + + 
Sbjct: 87  STVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVY 146

Query: 146 SVPTVIIFKNGEKKEAI--IGAVTKTTLTDSMDKFL 178
            +P  I+FK+G++       GA+TK  L + +D  L
Sbjct: 147 GLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176

BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|449431838|ref|XP_004133707.1| (PREDICTED: thioredoxin-like [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.6e-67
Identity = 130/176 (73.86%), Postives = 151/176 (85.80%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60
           MATVL SL LP SS LAST FS RRTSL LP+ R LKI +SFTSHS++SARSNARF HRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120
             +VC+ QET++IVP+ASEATW+S V ES++PV+VEFWAPWCGPCRM+HP++D+LSKEY 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKF 177
           GKFKFYKV+TD    IASRY IRS+PTVIIFK+GEKKEAIIGAV K TLT SM+KF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|359493854|ref|XP_002282265.2| (PREDICTED: thioredoxin M4, chloroplastic [Vitis vinifera])

HSP 1 Score: 207.2 bits (526), Expect = 2.3e-50
Identity = 110/188 (58.51%), Postives = 134/188 (71.28%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLASTTF-----------SGRRTSLVLPRYRALKIGHSFTSHSVKS 60
           MATVL SLA+P SS L S+ F           SGRR    LP +  LKI  S  S SV +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 61  ARSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIH 120
           A  ++R   R   VVC+ QET+  VP+  +ATWQS V+++  PVLVEFWAPWCGPCRMIH
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 121 PVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTL 178
           PV++EL+K+Y GK K YKVNTD+   IA+RY IRS+PTVIIFK+GEKKEAIIGAV K+TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|657987986|ref|XP_008386162.1| (PREDICTED: thioredoxin M4, chloroplastic [Malus domestica])

HSP 1 Score: 202.6 bits (514), Expect = 5.7e-49
Identity = 105/190 (55.26%), Postives = 134/190 (70.53%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLAST----------TFSGRRTSLVLPRYRALKIGHSFTSHSVKSA 60
           MATVL S+ +P SS L S+          + S       LPRYR LK+G +  + SV S 
Sbjct: 1   MATVLXSVVVPRSSALPSSAALSRIPAPSSLSSLSAGARLPRYRGLKVGSALRTRSVGSL 60

Query: 61  R---SNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRM 120
               ++   + R   VVC+ Q+T+  VP+ S+ATWQS V++S  PVLVEFWAPWCGPCRM
Sbjct: 61  SYGPASGXASRRGGLVVCEAQDTAVEVPAVSDATWQSLVLDSEYPVLVEFWAPWCGPCRM 120

Query: 121 IHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKT 178
           IHP++DEL+K+YAGK K YKVNTD+ A IA+RY IRS+PTVIIFK GEKK+A+IGAV K+
Sbjct: 121 IHPIIDELAKQYAGKLKCYKVNTDESASIATRYGIRSIPTVIIFKGGEKKDAVIGAVPKS 180

BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|658029089|ref|XP_008349985.1| (PREDICTED: thioredoxin M4, chloroplastic-like [Malus domestica])

HSP 1 Score: 200.7 bits (509), Expect = 2.2e-48
Identity = 104/190 (54.74%), Postives = 133/190 (70.00%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVLAST----------TFSGRRTSLVLPRYRALKIGHSFTSHSVKSA 60
           MATVL S+ +P SS L S+          + S       LPRYR LK+G +  + SV S 
Sbjct: 1   MATVLXSVVVPRSSALPSSAALSRIPAPSSLSSLSAGARLPRYRGLKVGSALRTRSVGSL 60

Query: 61  R---SNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRM 120
               ++   + R   VVC+ Q+T+  VP+ S+ TWQS V++S  PVLVEFWAPWCGPCRM
Sbjct: 61  SYGPASGXASRRGGLVVCEAQDTAVEVPAVSDETWQSLVLDSEYPVLVEFWAPWCGPCRM 120

Query: 121 IHPVVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKT 178
           IHP++DEL+K+YAGK K YKVNTD+ A IA+RY IRS+PTVIIFK GEKK+A+IGAV K+
Sbjct: 121 IHPIIDELAKQYAGKLKCYKVNTDESASIATRYGIRSIPTVIIFKGGEKKDAVIGAVPKS 180

BLAST of CmaCh04G009060 vs. NCBI nr
Match: gi|902171525|gb|KNA08009.1| (hypothetical protein SOVF_166590 [Spinacia oleracea])

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48
Identity = 102/187 (54.55%), Postives = 131/187 (70.05%), Query Frame = 1

Query: 1   MATVLGSLALPSSSVL----------ASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSA 60
           MA +L SLA+P S             +S+T S   TSL LP +R LK+    ++ ++ S 
Sbjct: 1   MAILLESLAIPCSLPFPSASLSPISSSSSTPSSLSTSLKLPEFRGLKVSSGCSTRALGSV 60

Query: 61  RSNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHP 120
            S AR   R  R+VC+  +T+  +PS +E TW+S V+ES  PV+VEFWAPWCGPCR++ P
Sbjct: 61  TSRARIGRRCSRIVCESSDTTFQLPSVTEETWKSLVLESEFPVIVEFWAPWCGPCRIVQP 120

Query: 121 VVDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLT 178
           V+DELSKE+AG+ K +KVNTD  A IAS Y +RS+PTVIIFKNGEKKEAIIGAV KTTLT
Sbjct: 121 VIDELSKEFAGRLKVFKVNTDDSANIASEYGVRSIPTVIIFKNGEKKEAIIGAVPKTTLT 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TRXM4_ARATH1.4e-4250.57Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2[more]
TRXM2_ORYSJ1.2e-3849.46Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE... [more]
TRXM_SPIOL2.0e-3852.70Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2[more]
TRXM1_ARATH4.5e-3846.84Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=2 SV=1[more]
TRXM2_ARATH5.9e-3846.67Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0L5C6_CUCSA1.1e-6773.86Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1[more]
E0CSM0_VITVI1.6e-5058.51Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02890 PE=4 SV=... [more]
A0A0K9QL86_SPIOL2.0e-4854.55Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166590 PE=4 SV=1[more]
A0A0J8BDD0_BETVU5.8e-4856.36Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096860 PE=4 S... [more]
M5WVD9_PRUPE4.1e-4654.87Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011915mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G15360.17.7e-4450.57 thioredoxin M-type 4[more]
AT1G03680.12.6e-3946.84 thioredoxin M-type 1[more]
AT4G03520.13.3e-3946.67 Thioredoxin superfamily protein[more]
AT2G15570.24.7e-2541.12 Thioredoxin superfamily protein[more]
AT1G50320.11.8e-1631.41 thioredoxin X[more]
Match NameE-valueIdentityDescription
gi|449431838|ref|XP_004133707.1|1.6e-6773.86PREDICTED: thioredoxin-like [Cucumis sativus][more]
gi|359493854|ref|XP_002282265.2|2.3e-5058.51PREDICTED: thioredoxin M4, chloroplastic [Vitis vinifera][more]
gi|657987986|ref|XP_008386162.1|5.7e-4955.26PREDICTED: thioredoxin M4, chloroplastic [Malus domestica][more]
gi|658029089|ref|XP_008349985.1|2.2e-4854.74PREDICTED: thioredoxin M4, chloroplastic-like [Malus domestica][more]
gi|902171525|gb|KNA08009.1|2.8e-4854.55hypothetical protein SOVF_166590 [Spinacia oleracea][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006109 regulation of carbohydrate metabolic process
biological_process GO:0009735 response to cytokinin
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005618 cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008047 enzyme activator activity
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0019904 protein domain specific binding
molecular_function GO:0004791 thioredoxin-disulfide reductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G009060.1CmaCh04G009060.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 18..177
score: 2.3
IPR005746ThioredoxinTIGRFAMsTIGR01068TIGR01068coord: 78..176
score: 5.8
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 69..176
score: 1.5
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 74..176
score: 2.31
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 76..175
score: 1.4
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 68..177
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 94..112
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 141..152
score: 3.1E-8coord: 93..101
score: 3.1E-8coord: 101..110
score: 3.
NoneNo IPR availablePANTHERPTHR10438:SF300THIOREDOXIN M1, CHLOROPLASTIC-RELATEDcoord: 18..177
score: 2.3