ClCG10G006910 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G006910
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Thioredoxin
Location	CG_Chr10 : 9869408 .. 9871575 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTGGCTTCCACCGCTTTCTCCGGCCGTCGGAGTTCCGTCGCTCTCCCGCAGTGCAGAGGCTTGAAGATCGCTCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCTAATGCTAGATTTACTCAGCGTTCGGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGGTTCGGATTCTGTTCTGCTATTTTCTTTTACTGTCTTTTTCTCTTGTTGGGATAAGTGAGGAATGGATTTTTCTTTTTTTTTTTTATTACGATACTTAGTATCTGTTGATGTTTGGTTTTGTTTGGTTTTGATACGCATGAAACTCAACAGGTGTGCAATTAGTAAATAATATGTTAAAGCGCCTCTAGAATTATAACTTATAAGCGTCAGCTTAAGACAAGTTTAACTTTTTCAGTATACGCTTAATATAAAATTAGAGAGAAACTAATGAAAAAATAAACATAGAAATCGCTTTGGTGGAGTGATGTTGACATGGTATAACAAATCATTTCCTGTTTGAATTTATGTACATGTCATATTCTTTCCCCATCCTTGCATTTGCTTGGATCTGAATGTAAATTACAGTGACACTAAGTTGGGATGTATCTGATGGATTGTTTGGAATGACTACCTAAGTGCTGTTTTTAAATACTTGAAAAGTCATTTCAAATAGCCACTTAATTGGACTGTAGAAATGTATTTCTAGTTCGAAGTGAAAGCTCGAGCATTAAAATTTCAAACGAATGACTACATTGATCATATAATATTACCTGAGATGATGCATTAGGCAATCAGTGGACACCCCATGGGTGAGTGATAAACCAATTCCGTCAATGCACCTTTGAGAGGGACAAGAGAGGGTCTCTGGGAGGGAGGTTGGCACTAAGCATTAGGAGTGTTAGTCGTTAATTGAGAAGATGGTTTCTACTGTGCCTGGGCCTTAATGATGCTACAAAGAGTGATCTGTAGGGAGCTGGTCTGATATTGGCTCAATATGTTGGGGGAAAGTGCCCCAGTTGTCTTTCTCTCTTGGTTCTGCCCAGTTCTCGTGTCCCGCTCTTTTTTGTGTGTATGAGTGAGCTTGTTTCTGTATGCATCTTGATTTGATTTGCATAGGAGCCACTGTTTACCTTGCATGACATCAGATTCTGAATCTTTTACAATAGGTATAAGTGTAACATTGAAATGATAACGCGTGTGTTGGTGGTTGTCGTTCCTGCACATTGTATTTTGATTGTTATTCTGCATGATTTCTATGAAATAACAGCTCTCTAACCATCTAAACGGTTATGAAATGGTGCAATTCAGCTACCTTTATAGTCCATTGTATACACATGCGCACATACAAACAATTTGCATGTAGTGTATATGGTTCATAATATTTGTCCAGTTTGGTCAAATTTTAAAAAAAAATTAATTCAATTAGAGAGTTCCATCTGTTCTTATATTGGGGAGTTTACTTGTATCAAAATTTTCCCTACTGTCATGTACCAGCATTTATTTTATTTATGAGATCATGGGAAGAGGACATCGGAAATTTCTGTTTTAACTTTAAGAATTGTGACACTTTCAACTGACTTTGAGTTTAGTTCTCTGTATCATTGATTGTACTAATTCTTCATCACTTGCTGTGATGTTCATATTAATCCTGGAAGGTCACAGTACTCAGTTCATGTTAGTATGTTCTCTTTTGACTCTTACTCTGCTGCCTGCCCAATTCGCGGGTCAATGATGTCACCTGCACCTACTTTTTCTCTCCTCGAAAAGCCCTTGTTGAGTTTAATTGAAATCGCTTGTTTCTTGAATGTTGCAGTACCTGCTGCTTCAGAAGCTACCTGGAAGTCACTGGTTATAGAATCTAAATTACCCGTACTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCAATCATTGATGACCTATCTAAAGAGTACGCTGGAAAGTTCAAATTTTACAAGGTGGATACCGATAACAACTCTTCAATTGCATCCCAATATGGTATTAGAAGCATACCTACAGTCATTATCTTCAAAGATGGTGAGAAGAAGGAGGCAATAATAGGTGCAGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAG

mRNA sequence

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTGGCTTCCACCGCTTTCTCCGGCCGTCGGAGTTCCGTCGCTCTCCCGCAGTGCAGAGGCTTGAAGATCGCTCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCTAATGCTAGATTTACTCAGCGTTCGGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGGTTCGGATTCTGTTCTGCTATTTTCTTTTACTGTCTTTTTCTCTTGTTGGGATAAGTCACAGTACTCAGTTCATGTTAGTATGTTCTCTTTTGACTCTTACTCTGCTGCCTGCCCAATTCGCGGGTCAATGATGTCACCTGCACCTACTTTTTCTCTCCTCGAAAAGCCCTTGTTGAGTTTAATTGAAATCGCTTGTTTCTTGAATGTTGCAGTACCTGCTGCTTCAGAAGCTACCTGGAAGTCACTGGTTATAGAATCTAAATTACCCGTACTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCAATCATTGATGACCTATCTAAAGAGTACGCTGGAAAGTTCAAATTTTACAAGGTGGATACCGATAACAACTCTTCAATTGCATCCCAATATGGTATTAGAAGCATACCTACAGTCATTATCTTCAAAGATGGTGAGAAGAAGGAGGCAATAATAGGTGCAGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAG

Coding sequence (CDS)

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTGGCTTCCACCGCTTTCTCCGGCCGTCGGAGTTCCGTCGCTCTCCCGCAGTGCAGAGGCTTGAAGATCGCTCACAGCTTCACTTCCCACTCTATAAGATCTGCCAGATCTAATGCTAGATTTACTCAGCGTTCGGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGGTTCGGATTCTGTTCTGCTATTTTCTTTTACTGTCTTTTTCTCTTGTTGGGATAAGTCACAGTACTCAGTTCATGTTAGTATGTTCTCTTTTGACTCTTACTCTGCTGCCTGCCCAATTCGCGGGTCAATGATGTCACCTGCACCTACTTTTTCTCTCCTCGAAAAGCCCTTGTTGAGTTTAATTGAAATCGCTTGTTTCTTGAATGTTGCAGTACCTGCTGCTTCAGAAGCTACCTGGAAGTCACTGGTTATAGAATCTAAATTACCCGTACTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCAATCATTGATGACCTATCTAAAGAGTACGCTGGAAAGTTCAAATTTTACAAGGTGGATACCGATAACAACTCTTCAATTGCATCCCAATATGGTATTAGAAGCATACCTACAGTCATTATCTTCAAAGATGGTGAGAAGAAGGAGGCAATAATAGGTGCAGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAG

Protein sequence

MATVLDSLTLPCSSALASTAFSGRRSSVALPQCRGLKIAHSFTSHSIRSARSNARFTQRSATIVCEAQETAAIGSDSVLLFSFTVFFSCWDKSQYSVHVSMFSFDSYSAACPIRGSMMSPAPTFSLLEKPLLSLIEIACFLNVAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL

Homology

[Close]

BLAST of ClCG10G006910 vs. Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 4.9e-38
Identity = 69/106 (65.09%), Postives = 91/106 (85.85%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VP  S++ W++ V+ES +PVLVEFWAPWCGPCRMIHPI+D L+K++AGKFKFYK++TD
Sbjct: 86  VEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTD 145

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            + + A++YGIRS+PTVIIFK GEKK++IIGAVP+ TL  ++E+FL
Sbjct: 146 ESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of ClCG10G006910 vs. Swiss-Prot
Match: TRXM2_ORYSJ (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 7.0e-37
Identity = 68/107 (63.55%), Postives = 90/107 (84.11%), Query Frame = 1


Query: 142 NVAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDT 201
           ++ VP  +++TW+SLV+ES+LPVLV +WA WCGPC+MI P++  LSKEY GK K YK++T
Sbjct: 72  SIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNT 131

Query: 202 DNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
           D N  IASQYG+RSIPT++IFK+GEKK+A+IGAVP++TL AS+EKF+
Sbjct: 132 DENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKFV 178

[Close]

BLAST of ClCG10G006910 vs. Swiss-Prot
Match: TRXM1_ORYSJ (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.8e-36
Identity = 66/104 (63.46%), Postives = 88/104 (84.62%), Query Frame = 1


Query: 145 VPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNN 204
           VP  +++TW+SLV+ES+LPVLVEFWA WCGPC+MI P+I  LSKEY GK   YK++TD N
Sbjct: 68  VPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDEN 127

Query: 205 SSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
             IA+Q+GIRSIPT++IFK+GEKK+A+IGAVP++TL +S++K++
Sbjct: 128 PDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

[Close]

BLAST of ClCG10G006910 vs. Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 64/104 (61.54%), Postives = 86/104 (82.69%), Query Frame = 1


Query: 145 VPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNN 204
           V   ++++W  LVI S+ PVLV+FWAPWCGPCRMI PIID+L+KEYAGK K YK++TD +
Sbjct: 69  VQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDES 128

Query: 205 SSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            + A++YGIRSIPTV+ FK+GE+K+++IGAVPKATL+  +EK++
Sbjct: 129 PNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

[Close]

BLAST of ClCG10G006910 vs. Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 63/104 (60.58%), Postives = 86/104 (82.69%), Query Frame = 1


Query: 145 VPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNN 204
           V   ++++WK  V+ES++PV+V+FWAPWCGPC++I P+ID+L+KEY+GK   YK++TD  
Sbjct: 76  VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEA 135

Query: 205 SSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
             IA+QY IRSIPTV+ FK+GE+KE+IIGAVPK+TLT S+EK+L
Sbjct: 136 PGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 179

[Close]

BLAST of ClCG10G006910 vs. TrEMBL
Match: A0A0A0L5C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.1e-47
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 1


Query: 145 VPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNN 204
           VPAASEATW+SLV ESKLPV+VEFWAPWCGPCRM+HPIIDDLSKEY GKFKFYKVDTD N
Sbjct: 74  VPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFKFYKVDTDAN 133

Query: 205 SSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKF 248
            SIAS+YGIRSIPTVIIFKDGEKKEAIIGAVPK TLTASMEKF
Sbjct: 134 PSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

[Close]

BLAST of ClCG10G006910 vs. TrEMBL
Match: A0A0A0L5C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 1


Query: 1  MATVLDSLTLPCSSALASTAFSGRRSSVALPQCRGLKIAHSFTSHSIRSARSNARFTQRS 60
          MATVLDSLTLPCSSALASTAFS RR+S+ LPQCRGLKIA+SFTSHS+RSARSNARF  RS
Sbjct: 1  MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61 ATIVCEAQETAAI 74
          ATIVCEAQETAAI
Sbjct: 61 ATIVCEAQETAAI 73

HSP 2 Score: 177.6 bits (449), Expect = 1.9e-41
Identity = 82/106 (77.36%), Postives = 97/106 (91.51%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VPA ++ATWKSLV+ES+ PVLVEFWAPWCGPCRMIHP+ID+L+ +YAGK K YK++TD
Sbjct: 85  VKVPAVTDATWKSLVLESESPVLVEFWAPWCGPCRMIHPVIDELANQYAGKLKCYKLNTD 144

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
           + SSIA++YGIRSIPTVIIFK+GEKKEAIIGAVPK TLT S+EKFL
Sbjct: 145 DCSSIATEYGIRSIPTVIIFKNGEKKEAIIGAVPKTTLTTSIEKFL 190

[Close]

BLAST of ClCG10G006910 vs. TrEMBL
Match: W9QYV9_9ROSA (Thioredoxin M4 OS=Morus notabilis GN=L484_002920 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.5e-41
Identity = 78/106 (73.58%), Postives = 98/106 (92.45%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V V A ++A+WKSLV++S LPV+VEFWAPWCGPCRMIHPI+DDL+K+Y GK KFYKV+TD
Sbjct: 82  VEVAAVNQASWKSLVLDSDLPVVVEFWAPWCGPCRMIHPIVDDLAKQYVGKVKFYKVNTD 141

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
           ++ +IA++YGIRSIPTVI+FKDGEKK++IIGAVPK+TLT S+EKFL
Sbjct: 142 DSPTIATEYGIRSIPTVIMFKDGEKKDSIIGAVPKSTLTTSIEKFL 187

[Close]

BLAST of ClCG10G006910 vs. TrEMBL
Match: W9QYV9_9ROSA (Thioredoxin M4 OS=Morus notabilis GN=L484_002920 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 1


Query: 1  MATVLDSLTLPCSSALASTAFSGRRSSVA--------LPQCRGLKIAHSFTSHSIRSARS 60
          MATVL++LTLP   AL S   S   +S A        LPQ RGLK+A S ++ S+ S  S
Sbjct: 1  MATVLETLTLPRCFALPSRGLSPMATSSASSLVARLGLPQFRGLKVAQSLSTRSVGSVSS 60

Query: 61 --NARFTQRSATIVCEAQETA 72
            ++R  +R   IVCEAQETA
Sbjct: 61 GPSSRVGRRGGAIVCEAQETA 81

HSP 2 Score: 174.5 bits (441), Expect = 1.6e-40
Identity = 80/106 (75.47%), Postives = 95/106 (89.62%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VP  ++ATW+SLV+ES  PVLVEFWAPWCGPCRMIHPIID+L+K+YAGK K YKV+TD
Sbjct: 86  VEVPPVTDATWQSLVLESDSPVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKVNTD 145

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
             ++IA+QYGIRSIPTVIIFK GEKK+A+IGAVPK+TLT S+EKFL
Sbjct: 146 EGAAIATQYGIRSIPTVIIFKGGEKKDAVIGAVPKSTLTTSIEKFL 191

[Close]

BLAST of ClCG10G006910 vs. TrEMBL
Match: M5WVD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011915mg PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 2.5e-01
Identity = 35/86 (40.70%), Postives = 43/86 (50.00%), Query Frame = 1


Query: 1  MATVLDSLTLPCSSALASTA----------FSGRRSSVALPQCRGLKIAHSFTSHSIRS- 60
          MATVLDSL +P SSAL S+A           S       L   RGLK+  +  + SI S 
Sbjct: 1  MATVLDSLVVPRSSALPSSAALSPIAAASSVSSLSGRSGLRHYRGLKVGSALRTRSIGSL 60

Query: 61 ----ARSNARFTQRSATIVCEAQETA 72
              A   AR  +R   +VCEAQ+TA
Sbjct: 61 SYGPAAGGARH-RRGGLVVCEAQDTA 85

HSP 2 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 78/106 (73.58%), Postives = 95/106 (89.62%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VPA ++ATW+SLV++S  PVLVEFWAPWCGPCRMIHPIID+LSK+Y GK K YKV+TD
Sbjct: 81  VEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTD 140

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            + SIA++YGIRSIPTV+IFK+GEKK+ +IGAVPK+TLT S+EKFL
Sbjct: 141 ESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 186

[Close]

BLAST of ClCG10G006910 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4)

HSP 1 Score: 159.5 bits (402), Expect = 2.7e-39
Identity = 69/106 (65.09%), Postives = 91/106 (85.85%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VP  S++ W++ V+ES +PVLVEFWAPWCGPCRMIHPI+D L+K++AGKFKFYK++TD
Sbjct: 86  VEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTD 145

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            + + A++YGIRS+PTVIIFK GEKK++IIGAVP+ TL  ++E+FL
Sbjct: 146 ESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of ClCG10G006910 vs. TAIR10
Match: AT4G03520.1 (AT4G03520.1 Thioredoxin superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-34
Identity = 72/153 (47.06%), Postives = 103/153 (67.32%), Query Frame = 1


Query: 101 MFSFDSYSAACPIRGSMMSPAPTFSLLEKPLLSLIEIACFLNVA-----VPAASEATWKS 160
           MF+    S+   IR S+ SPA   S+  +P +S +  A           +   +++TW S
Sbjct: 35  MFAVLPESSGLRIRLSL-SPASLTSI-HQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDS 94

Query: 161 LVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNNSSIASQYGIRS 220
           LV+++  PV+V+FWAPWCGPC+MI P+++DL++ Y GK KFYK++TD + +   QYG+RS
Sbjct: 95  LVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRS 154

Query: 221 IPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
           IPT++IF  GEKK+ IIGAVPK TLT+S++KFL
Sbjct: 155 IPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of ClCG10G006910 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1)

HSP 1 Score: 141.7 bits (356), Expect = 5.9e-34
Identity = 59/104 (56.73%), Postives = 83/104 (79.81%), Query Frame = 1


Query: 145 VPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNN 204
           +P  +++TW SLV+++  PV V+FWAPWCGPC+MI PI+++L+++YAG+FKFYK++TD +
Sbjct: 76  IPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDES 135

Query: 205 SSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            +   QYG+RSIPT++IF +GEKK+ IIGAV K TL  S+ KFL
Sbjct: 136 PATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of ClCG10G006910 vs. TAIR10
Match: AT2G15570.2 (AT2G15570.2 Thioredoxin superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 61/178 (34.27%), Postives = 101/178 (56.74%), Query Frame = 1


Query: 71  AAIGSDSVLLFSFTVFFSCWDKSQYSVHVSMFSFDSYSAACPIRGSMMSPAPTFSLLEKP 130
           A   S S + F+ T F +    S  S    + SF   S     R S++S + +       
Sbjct: 2   AISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSAS------- 61

Query: 131 LLSLIEIACFLNVAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEY 190
            L L  +    + A    ++ +W+  V++S+ PVLVEF+  WCGPCRM+H IID+++ +Y
Sbjct: 62  RLRLSPLCVRDSRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDY 121

Query: 191 AGKFKFYKVDTDNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
           AGK   Y ++ DN+  +A +Y I+++P V++FK+GEK+E+I+G +PK    +++E+ L
Sbjct: 122 AGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

[Close]

BLAST of ClCG10G006910 vs. TAIR10
Match: AT1G76760.1 (AT1G76760.1 thioredoxin Y1)

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-16
Identity = 37/97 (38.14%), Postives = 62/97 (63.92%), Query Frame = 1


Query: 152 TWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNNSSIASQY 211
           +++ L++ S  PVLV+++A WCGPC+ + PI++++S+    K +  K+DT+   SIA++Y
Sbjct: 72  SFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKY 131

Query: 212 GIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            I ++PT I+FKDGE  +   GA+    L   +E  L
Sbjct: 132 KIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSL 168

[Close]

BLAST of ClCG10G006910 vs. NCBI nr
Match: gi|449431838|ref|XP_004133707.1| (PREDICTED: thioredoxin-like [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 4.4e-47
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 1


Query: 145 VPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTDNN 204
           VPAASEATW+SLV ESKLPV+VEFWAPWCGPCRM+HPIIDDLSKEY GKFKFYKVDTD N
Sbjct: 74  VPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFKFYKVDTDAN 133

Query: 205 SSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKF 248
            SIAS+YGIRSIPTVIIFKDGEKKEAIIGAVPK TLTASMEKF
Sbjct: 134 PSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

[Close]

BLAST of ClCG10G006910 vs. NCBI nr
Match: gi|449431838|ref|XP_004133707.1| (PREDICTED: thioredoxin-like [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 1


Query: 1  MATVLDSLTLPCSSALASTAFSGRRSSVALPQCRGLKIAHSFTSHSIRSARSNARFTQRS 60
          MATVLDSLTLPCSSALASTAFS RR+S+ LPQCRGLKIA+SFTSHS+RSARSNARF  RS
Sbjct: 1  MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61 ATIVCEAQETAAI 74
          ATIVCEAQETAAI
Sbjct: 61 ATIVCEAQETAAI 73

HSP 2 Score: 180.3 bits (456), Expect = 4.3e-42
Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VPA ++A+WKS V+ES  PVLVEFWAPWCGPCRMIHPIIDDL+K+YAGK K YKV+TD
Sbjct: 80  VQVPAVTDASWKSSVLESDFPVLVEFWAPWCGPCRMIHPIIDDLAKQYAGKLKCYKVNTD 139

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            + SIA+QYGIRSIPTVIIFKDGEKK+AIIGAVPK+TLT S+EKFL
Sbjct: 140 ESPSIATQYGIRSIPTVIIFKDGEKKDAIIGAVPKSTLTTSIEKFL 185

[Close]

BLAST of ClCG10G006910 vs. NCBI nr
Match: gi|1009170265|ref|XP_015866106.1| (PREDICTED: thioredoxin-1 [Ziziphus jujuba])

HSP 1 Score: 56.6 bits (135), Expect = 7.1e-05
Identity = 42/106 (39.62%), Postives = 53/106 (50.00%), Query Frame = 1


Query: 1   MATVLDSLTLPCSSALASTAFSG-RRSSVALP-------QCRGLKIAHSFTSHSIRSARS 60
           MATVL+SL +P  SAL S   S    SS++ P       Q RGL++ HS  + S+ S   
Sbjct: 1   MATVLESLAVPRCSALPSNTLSPVAASSISSPSGRRRLSQFRGLQLRHSLVTRSLGSVSF 60

Query: 61  NARFTQRSATIVCEAQETA--------AIGSDSVLLFSFTVFFSCW 91
            +R ++R   IVCEAQETA        A    SVL   F V    W
Sbjct: 61  GSRGSRRGGLIVCEAQETAVQVPAVTDASWKSSVLESDFPVLVEFW 106

HSP 2 Score: 178.3 bits (451), Expect = 1.6e-41
Identity = 80/106 (75.47%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VPA S+ATW+SLV++++LPVLVEFWAPWCGPCRMIHPIID+L+K+YAGK K YKV+TD
Sbjct: 80  VGVPAVSDATWQSLVLDAELPVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKVNTD 139

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            ++S+A++YGIRSIPTVIIFK GEKK+A+IGAVPK+TLT S+EKFL
Sbjct: 140 ESASVATRYGIRSIPTVIIFKGGEKKDAVIGAVPKSTLTTSIEKFL 185

[Close]

BLAST of ClCG10G006910 vs. NCBI nr
Match: gi|470118058|ref|XP_004295160.1| (PREDICTED: thioredoxin M4, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 44.3 bits (103), Expect = 3.6e-01
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 1


Query: 1  MATVLDSLTLPCSSAL--------ASTAFSGRRSSVALPQCRGLKIAHSF-TSHSIRSAR 60
          MATVL+S+ +P SSAL        A+++ S R   + LP   GLK+  +  TS S+ S  
Sbjct: 1  MATVLESIVVPRSSALPSASLSPIAASSVSSRTGRLGLPHFTGLKVRSALQTSRSVGSL- 60

Query: 61 SNARFTQRSATIVCEAQETA 72
          +     +R   +VCEAQ+TA
Sbjct: 61 TYGPARRRRGLVVCEAQDTA 79

HSP 2 Score: 177.9 bits (450), Expect = 2.1e-41
Identity = 81/106 (76.42%), Postives = 96/106 (90.57%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VPA ++ TWKSLVIES LPVLVEFWAPWCGPCRMIHP+I +LS+EYAGKFKF++++TD
Sbjct: 78  VQVPAVTDKTWKSLVIESDLPVLVEFWAPWCGPCRMIHPVIGELSQEYAGKFKFFQLNTD 137

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
            + S AS+YGIRSIPTV+IFKDGEKK+A+IGAVPK TLT S+EKFL
Sbjct: 138 ESPSTASEYGIRSIPTVMIFKDGEKKDAVIGAVPKTTLTTSIEKFL 183

[Close]

BLAST of ClCG10G006910 vs. NCBI nr
Match: gi|697148344|ref|XP_009628353.1| (PREDICTED: thioredoxin-like [Nicotiana tomentosiformis])

HSP 1 Score: 54.3 bits (129), Expect = 3.5e-04
Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 1


Query: 1  MATVLDSLTLPCSSALAST---------AFSGRRSSVALPQCRGLKIAHSFTSHSIRSAR 60
          MA VL+++ +P +SAL+S          +FSGRRSSV   Q RGLK+  S +  S+ S  
Sbjct: 1  MAGVLETIAVPRASALSSARLAPIADSNSFSGRRSSVNFSQFRGLKVQQSRSPVSLSSTS 60

Query: 61 SNARFTQRSATIVCEAQETA 72
           + R   R   IVCEAQETA
Sbjct: 61 YSVR---RGGRIVCEAQETA 77

HSP 2 Score: 177.6 bits (449), Expect = 2.8e-41
Identity = 82/106 (77.36%), Postives = 97/106 (91.51%), Query Frame = 1


Query: 143 VAVPAASEATWKSLVIESKLPVLVEFWAPWCGPCRMIHPIIDDLSKEYAGKFKFYKVDTD 202
           V VPA ++ATWKSLV+ES+ PVLVEFWAPWCGPCRMIHP+ID+L+ +YAGK K YK++TD
Sbjct: 85  VKVPAVTDATWKSLVLESESPVLVEFWAPWCGPCRMIHPVIDELANQYAGKLKCYKLNTD 144

Query: 203 NNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 249
           + SSIA++YGIRSIPTVIIFK+GEKKEAIIGAVPK TLT S+EKFL
Sbjct: 145 DCSSIATEYGIRSIPTVIIFKNGEKKEAIIGAVPKTTLTTSIEKFL 190

The following BLAST results are available for this feature:

BLAST of ClCG10G006910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRXM4_ARATH	4.9e-38	65.09	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2	[more]
TRXM2_ORYSJ	7.0e-37	63.55	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE...	[more]
TRXM1_ORYSJ	7.8e-36	63.46	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE...	[more]
TRXM_PEA	1.5e-34	61.54	Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1	[more]
TRXM_SPIOL	1.9e-34	60.58	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2	[more]

BLAST of ClCG10G006910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5C6_CUCSA	3.1e-47	91.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1	[more]
A0A0A0L5C6_CUCSA	1.7e-26	89.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1	[more]
W9QYV9_9ROSA	9.5e-41	73.58	Thioredoxin M4 OS=Morus notabilis GN=L484_002920 PE=4 SV=1	[more]
W9QYV9_9ROSA	2.2e-05	46.91	Thioredoxin M4 OS=Morus notabilis GN=L484_002920 PE=4 SV=1	[more]
M5WVD9_PRUPE	2.5e-01	40.70	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011915mg PE=4 SV=1	[more]

BLAST of ClCG10G006910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15360.1	2.7e-39	65.09	thioredoxin M-type 4	[more]
AT4G03520.1	1.2e-34	47.06	Thioredoxin superfamily protein	[more]
AT1G03680.1	5.9e-34	56.73	thioredoxin M-type 1	[more]
AT2G15570.2	1.7e-25	34.27	Thioredoxin superfamily protein	[more]
AT1G76760.1	4.3e-16	38.14	thioredoxin Y1	[more]

BLAST of ClCG10G006910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431838\|ref\|XP_004133707.1\|	4.4e-47	91.26	PREDICTED: thioredoxin-like [Cucumis sativus]	[more]
gi\|449431838\|ref\|XP_004133707.1\|	2.5e-26	89.04	PREDICTED: thioredoxin-like [Cucumis sativus]	[more]
gi\|1009170265\|ref\|XP_015866106.1\|	7.1e-05	39.62	PREDICTED: thioredoxin-1 [Ziziphus jujuba]	[more]
gi\|470118058\|ref\|XP_004295160.1\|	3.6e-01	38.75	PREDICTED: thioredoxin M4, chloroplastic [Fragaria vesca subsp. vesca]	[more]
gi\|697148344\|ref\|XP_009628353.1\|	3.5e-04	45.00	PREDICTED: thioredoxin-like [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0000103	sulfate assimilation
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0006109	regulation of carbohydrate metabolic process
biological_process	GO:0006457	protein folding
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0047134	protein-disulfide reductase activity
molecular_function	GO:0019904	protein domain specific binding
molecular_function	GO:0004791	thioredoxin-disulfide reductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G006910.1	ClCG10G006910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 18..93 score: 6.0E-60coord: 157..248 score: 6.0
IPR005746	Thioredoxin	TIGRFAMs	TIGR01068	TIGR01068	coord: 149..247 score: 8.3
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 149..247 score: 1.9
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 140..248 score: 1.68
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 148..246 score: 4.7
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 115..248 score: 15
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 165..183 scor
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 164..172 score: 1.3E-8coord: 212..223 score: 1.3E-8coord: 172..181 score: 1.
None	No IPR available	PANTHER	PTHR10438:SF300	THIOREDOXIN M1, CHLOROPLASTIC-RELATED	coord: 18..93 score: 6.0E-60coord: 157..248 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G006910	Csa3G104920	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G006910	MELO3C016516	Melon (DHL92) v3.5.1	mewcgB416
ClCG10G006910	Cla011786	Watermelon (97103) v1	wcgwmB066
ClCG10G006910	Cla97C10G190770	Watermelon (97103) v2	wcgwmbB038
ClCG10G006910	Bhi11G000611	Wax gourd	wcgwgoB100
ClCG10G006910	CSPI03G06150	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G006910	Cucsa.074740	Cucumber (Gy14) v1	cgywcgB074
ClCG10G006910	CmaCh16G007820	Cucurbita maxima (Rimu)	cmawcgB283
ClCG10G006910	CmaCh04G009060	Cucurbita maxima (Rimu)	cmawcgB614
ClCG10G006910	CmoCh04G009730	Cucurbita moschata (Rifu)	cmowcgB615
ClCG10G006910	CmoCh16G008450	Cucurbita moschata (Rifu)	cmowcgB278
ClCG10G006910	Lsi05G007150	Bottle gourd (USVL1VR-Ls)	lsiwcgB318
ClCG10G006910	Cp4.1LG14g00290	Cucurbita pepo (Zucchini)	cpewcgB195
ClCG10G006910	Cp4.1LG01g08570	Cucurbita pepo (Zucchini)	cpewcgB349
ClCG10G006910	CsGy3G006250	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G006910	MELO3C016516.2	Melon (DHL92) v3.6.1	medwcgB402
ClCG10G006910	Carg00024	Silver-seed gourd	carwcgB0641
ClCG10G006910	Carg21080	Silver-seed gourd	carwcgB0459
ClCG10G006910	CsaV3_3G006270	Cucumber (Chinese Long) v3	cucwcgB194

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G006910	Wax gourd	wcgwgoB086