CSPI03G06150 (gene) Wild cucumber (PI 183967)

NameCSPI03G06150
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionThioredoxin
LocationChr3 : 5281239 .. 5284127 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAACGTGTTATAATTTTATTGGTCTGTATTTGAACTTGAATCAACGTCACGGTGTGCCACTCCCCAGCACCCTCATCCATTCGTCCTCCATCCATTGACACATCAAACCCAAAACCCAATTCCCTAATTTTGCCCAAACCCCCCTCTCTCTCTCTCTCTCTCTCTCTCACCCACAACCACCATCACCACCCATCAATCCCTTCCTTCGATGGCGACGGTTCTCGATTCCCTCACTCTTCCTTGTTCATCCGCCTTGGCTTCCACCGCTTTCTCTGCCCGTCGCACCTCCCTTTGCCTCCCGCAGTGCAGAGGCTTGAAGATCGCAAACAGCTTCACTTCTCACTCTCTACGATCTGCCAGATCTAATGCTAGATTTCCTCACCGTTCTGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGGTTGGGATTTTGTTCTCCTATTTTCTTTTACTGTCGTTTTTCTCTTGTTTGGAGAAATGAGGAAGTGAAACTTTTGACGATATTTGGATGTTTGGTGGATTTAAGATCATGTTCTTAGTAGCTATTGGTGTTTGGTTTGGTTTGATTTGATTTCGTTTAGATACTTATGAAACTCGACGTGTGTGCGATTAATGAATAATATGTTAAAGCACCTCTAGAGTTATGACTTATACGTCAGATCATGATGAGTTTAACTTTTTATGTATATGCATAATATAAAATTAGAGCGAAAACTAAAAAAGTAACTAAAAAAGAAGTCAGTTTGGTGGATTGATACTGACACGGTATAACAGATCATTTCCTGTTTGAATTTATGTACTTGTCAATATTCATTCCATATCCTTGCATTTTCTTTGATCTGAATATAAAATTCAGTGATACTAAGTTGGGATGAATCTGTTGTCCTGTTTAGAAAGGCTTCTAATTGATTTTTTCAAACTCTTAAAAAAATCGTTACAAATAGGCTCTGAATTGGGCTGTTGAAATGTGTTTCCATTTTGAAGTGAAAGCTTGAGCTTTAAAATTTCTAACGACTTAATACATTGACCATATATTATTACCCGAGATGATGCCTTAGGCAATCAGTGGACACCCAATTGGTGAGTCACAGACCAATTTTGTCAACACATCCTTGAAAGGGACCTGTGCTTGTAAGAGTTGTCACTAAGCATTAGGAGTAATAGTTGCTAATTGAGTAGATGATTTCTGCTGTGCCTGGGTCTTAACGATGCCACTAAGAGTGATCAGTAGGGAGCTGGTCTGATATTGGCTCAATATGTTGGGAAAATGCCCCAGTTGTTTTTCTCTTATGTCCTGTTCTCTCATCCCACACTTTTCGTGTGTATGAGTGAGTGTGTTTCTGTATGCATCTTGATTTATTGTATTGTATGGCGTCAGATTCTGAGTCTTTAACAATCGGTGTAAGTATTAACATTGAAATGTTATAGCACATGCGTTGATTGTTGTCGTTCCAGCATATTGTATTTTAATTGTTATTCTGAATGATTGGTATGAAATAACAGCTCTTGAACTGTCGAAACGGTAAATGGTACATTTCAGCTATCTTTATATTCTAATATACAAGCATGCGCACATACATACACTTTGTATGTAGTGTATATAGTTCATAAGTGTTTGTTCAGTTGCTAGTCTTTTTTTTTTTTTTTACCAATTTGATCAGAGAACTCCATTTGTTTCTGTATTGAGGGGTTTACTTGTATCAAAATTTTCCATATCTGCTTTCATATACCCGACATTTATTTTATTTATGAGATCATGGGAAGAAGACTTTGAAAATTTCTGTTTGGACCTTAAGAATTGCGACACTTTTAACTGACTTTGTTTTCAGATCTCTGTATCATTGTTTATACTTATTTTTAATCACTTGCTGTGATGTTGATATTAATCCGGGAGAGGCACAATACTCATTTTATGTTAGTATCTTCTCTGCTGCCTACCTCATTGGAGGTCGATAATATTACCTGCACCTACTTTTTCTCTCCTCGAAAAAGCATTGTTGTGGTTAATTGAAATTGCATGTTTCTTGAATGTTGCAGTACCTGCTGCTTCAGAAGCTACCTGGGAGTCACTAGTTACAGAATCTAAATTGCCCGTCATGGTAGAATTTTGGGCTCCATGGTGCGGTCCTTGCCGCATGATGCATCCAATCATTGATGATTTATCAAAAGAGTATGAAGGAAAGTTCAAATTTTACAAGGTGGATACTGATGCCAACCCTTCGATTGCATCCCGTTATGGTATCAGAAGCATACCTACTGTGATTATCTTTAAAGATGGTGAGAAGAAAGAGGCAATAATAGGTGCAGTTCCTAAAGGAACTTTGACAGCCAGTATGGAAAAATTCTCGTAGAGATGGCTAATATAAAGTACGAATTGTAAGATTTAAGCTGCTTTCCCATTATTTCCTTAATTTTAGCTTCTAATATCTGAAGATGAATTCTCTACTCTGGAAATAAACTCTCCTCTTTTGTTACATATAGTTCCTTGATGCTTCTGTATCTTCTTTAGGTTGTATCTATTGCTGCAATACTTTCACTATGAATGCATCTTTCATATGTACAATTATTTTAATATACATGAAATTCTTCGATGTATTGATATTTGTATTAATCTTCTGCTGGAATGCATGAATTACTTGCCACATTGAATTGTAGAGAACTTTTGGTACATATTTTAAAGGTATTCTCTACAAGTGGCCAGGTATTCTCTTCCATGCTTGAAACTCTTGTTATAACAAAAAGCTCAGTAATGACTTGGGCGTTGGAGGCATTGTCGCAAGTAATTCCACTTTGATGCCCATGCTCTCCTTGTTCTTTAGGTTACGCATTCATCTCTGAATTGAAAATTCACACCGGCATTGTCAAGTGAAGTTCAAGAG

mRNA sequence

ATGGCGACGGTTCTCGATTCCCTCACTCTTCCTTGTTCATCCGCCTTGGCTTCCACCGCTTTCTCTGCCCGTCGCACCTCCCTTTGCCTCCCGCAGTGCAGAGGCTTGAAGATCGCAAACAGCTTCACTTCTCACTCTCTACGATCTGCCAGATCTAATGCTAGATTTCCTCACCGTTCTGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGTACCTGCTGCTTCAGAAGCTACCTGGGAGTCACTAGTTACAGAATCTAAATTGCCCGTCATGGTAGAATTTTGGGCTCCATGGTGCGGTCCTTGCCGCATGATGCATCCAATCATTGATGATTTATCAAAAGAGTATGAAGGAAAGTTCAAATTTTACAAGGTGGATACTGATGCCAACCCTTCGATTGCATCCCGTTATGGTATCAGAAGCATACCTACTGTGATTATCTTTAAAGATGGTGAGAAGAAAGAGGCAATAATAGGTGCAGTTCCTAAAGGAACTTTGACAGCCAGTATGGAAAAATTCTCGTAG

Coding sequence (CDS)

ATGGCGACGGTTCTCGATTCCCTCACTCTTCCTTGTTCATCCGCCTTGGCTTCCACCGCTTTCTCTGCCCGTCGCACCTCCCTTTGCCTCCCGCAGTGCAGAGGCTTGAAGATCGCAAACAGCTTCACTTCTCACTCTCTACGATCTGCCAGATCTAATGCTAGATTTCCTCACCGTTCTGCAACTATCGTTTGCGAAGCTCAGGAAACTGCTGCCATTGTACCTGCTGCTTCAGAAGCTACCTGGGAGTCACTAGTTACAGAATCTAAATTGCCCGTCATGGTAGAATTTTGGGCTCCATGGTGCGGTCCTTGCCGCATGATGCATCCAATCATTGATGATTTATCAAAAGAGTATGAAGGAAAGTTCAAATTTTACAAGGTGGATACTGATGCCAACCCTTCGATTGCATCCCGTTATGGTATCAGAAGCATACCTACTGTGATTATCTTTAAAGATGGTGAGAAGAAAGAGGCAATAATAGGTGCAGTTCCTAAAGGAACTTTGACAGCCAGTATGGAAAAATTCTCGTAG
BLAST of CSPI03G06150 vs. Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 1.8e-42
Identity = 93/190 (48.95%), Postives = 128/190 (67.37%), Query Frame = 1

Query: 1   MATVLDSLTLP----------CSSALASTAFSARRTSLC-LPQCRGLKIANSFTSHSLRS 60
           MA++LDS+T+            SS+ A+ + S RR S     + RGLK + S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFPHRSATIVCEAQETAAI---VPAASEATWESLVTESKLPVMVEFWAPWCGPCR 120
             +      R   I CEAQ+T A    VP  S++ W++ V ES +PV+VEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MMHPIIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPK 177
           M+HPI+D L+K++ GKFKFYK++TD +P+ A+RYGIRS+PTVIIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

BLAST of CSPI03G06150 vs. Swiss-Prot
Match: TRXM2_ORYSJ (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 3.1e-42
Identity = 93/183 (50.82%), Postives = 128/183 (69.95%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAFSAR--RTSLCLPQCRGLKIANSFTSHSLRSARS---NAR 60
           MA+ L + T  CSS LAS + SA   R    +P  RG++        +LR+      N R
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRY------QALRADSGFAGNRR 60

Query: 61  FPHRSATIVC--EAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIID 120
              R A++VC  + Q+T+  VP  +++TW+SLV ES+LPV+V +WA WCGPC+M+ P++ 
Sbjct: 61  GGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVG 120

Query: 121 DLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASM 177
            LSKEYEGK K YK++TD NP IAS+YG+RSIPT++IFK+GEKK+A+IGAVP+ TL AS+
Sbjct: 121 KLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASI 177

BLAST of CSPI03G06150 vs. Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 82/172 (47.67%), Postives = 120/172 (69.77%), Query Frame = 1

Query: 5   LDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRSATIV 64
           L S T   SS+ ++++ S+RR    LP+  GL+I  S +  SL S     R       +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQ-PRVSRLRRAVV 73

Query: 65  CEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFK 124
           CEAQET   +   +++TW+SLV ++  PV+V+FWAPWCGPC+M+ P+++DL++ Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 177
           FYK++TD +P+   +YG+RSIPT++IF  GEKK+ IIGAVPK TLT+S++KF
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKF 184

BLAST of CSPI03G06150 vs. Swiss-Prot
Match: TRXM1_ORYSJ (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-40
Identity = 88/172 (51.16%), Postives = 122/172 (70.93%), Query Frame = 1

Query: 7   SLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRSATIVCE 66
           S+  P +S   + A    +  L LPQCRG++ A       LRS R+      R  ++VC 
Sbjct: 9   SVAKPAASPPVAVAAVTPQRRL-LPQCRGVRAAPVVR---LRSGRA------RGVSVVCA 68

Query: 67  AQ--ETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFK 126
           AQ  ET+  VP  +++TW+SLV ES+LPV+VEFWA WCGPC+M+ P+I  LSKEYEGK  
Sbjct: 69  AQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLN 128

Query: 127 FYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 177
            YK++TD NP IA+++GIRSIPT++IFK+GEKK+A+IGAVP+ TL +S++K+
Sbjct: 129 CYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKY 170

BLAST of CSPI03G06150 vs. Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-39
Identity = 75/157 (47.77%), Postives = 111/157 (70.70%), Query Frame = 1

Query: 20  AFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRSATIVCEAQETAAIVPAASE 79
           +FS R+    LP+  GL+     T  SL S   N+R       ++CEAQ+TA  +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFKFYKVDTDANPSIASR 139
           +TW+SLV ++  PV V+FWAPWCGPC+M+ PI+++L+++Y G+FKFYK++TD +P+   +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 177
           YG+RSIPT++IF +GEKK+ IIGAV K TL  S+ KF
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKF 178

BLAST of CSPI03G06150 vs. TrEMBL
Match: A0A0A0L5C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.3e-94
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60
           MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120
           ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKFS 178
           GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKFS
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKFS 177

BLAST of CSPI03G06150 vs. TrEMBL
Match: E0CSM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02890 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 9.2e-54
Identity = 115/187 (61.50%), Postives = 138/187 (73.80%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAF-----------SARRTSLCLPQCRGLKIANSFTSHSLRS 60
           MATVLDSL +P SSAL S+AF           S RR    LP+  GLKI  S  S S+ +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 61  ARSNARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMH 120
           A  ++R   R   +VCEAQETA  VPA  +ATW+SLV ++  PV+VEFWAPWCGPCRM+H
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 121 PIIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTL 177
           P+I++L+K+Y GK K YKV+TD +PSIA+RYGIRSIPTVIIFK GEKKEAIIGAVPK TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

BLAST of CSPI03G06150 vs. TrEMBL
Match: W9QYV9_9ROSA (Thioredoxin M4 OS=Morus notabilis GN=L484_002920 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.5e-53
Identity = 114/186 (61.29%), Postives = 140/186 (75.27%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAFSARRTS--------LCLPQCRGLKIANSFTSHSLRSARS 60
           MATVL++LTLP   AL S   S   TS        L LPQ RGLK+A S ++ S+ S  S
Sbjct: 1   MATVLETLTLPRCFALPSRGLSPMATSSASSLVARLGLPQFRGLKVAQSLSTRSVGSVSS 60

Query: 61  --NARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHP 120
             ++R   R   IVCEAQETA  V A ++A+W+SLV +S LPV+VEFWAPWCGPCRM+HP
Sbjct: 61  GPSSRVGRRGGAIVCEAQETAVEVAAVNQASWKSLVLDSDLPVVVEFWAPWCGPCRMIHP 120

Query: 121 IIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLT 177
           I+DDL+K+Y GK KFYKV+TD +P+IA+ YGIRSIPTVI+FKDGEKK++IIGAVPK TLT
Sbjct: 121 IVDDLAKQYVGKVKFYKVNTDDSPTIATEYGIRSIPTVIMFKDGEKKDSIIGAVPKSTLT 180

BLAST of CSPI03G06150 vs. TrEMBL
Match: A0A059BUW0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03319 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-49
Identity = 106/189 (56.08%), Postives = 132/189 (69.84%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAF-------------SARRTSLCLPQCRGLKIANSFTSHSL 60
           MA VL+SL +P SS  AS A              + RR S   PQ  GL+I     + SL
Sbjct: 1   MAAVLESLAVPRSSGAASAAALSPVASASSLAPTAGRRRSATFPQASGLRIGPVSVARSL 60

Query: 61  RSARSNARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRM 120
           RS       P R+  +VCEAQ+TA  V   ++ATW+SLV ES+ PV+VEFWAPWCGPCRM
Sbjct: 61  RSPSQR---PRRAPAVVCEAQDTAVEVAGVTDATWQSLVLESESPVLVEFWAPWCGPCRM 120

Query: 121 MHPIIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKG 177
           +HP+ID+L+K+Y GK K YKV+TD +PS+A+RYGIRSIPTV+IFK GEKK+A+IGAVPK 
Sbjct: 121 IHPVIDELAKQYAGKLKCYKVNTDESPSVATRYGIRSIPTVMIFKSGEKKDAVIGAVPKS 180

BLAST of CSPI03G06150 vs. TrEMBL
Match: B9S2L1_RICCO (Thioredoxin m(Mitochondrial)-type, putative OS=Ricinus communis GN=RCOM_1209610 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 110/186 (59.14%), Postives = 140/186 (75.27%), Query Frame = 1

Query: 1   MATVLDSLTLP-CSSALASTAFSA----RRTSLCLPQCRGLKIANSFTSHSLRSARSNAR 60
           MATVL+SL++P  SSAL   +  +    RR ++ LP  +GLK++      S+ +ARS AR
Sbjct: 1   MATVLESLSIPRASSALPPNSSLSSSVNRRPAVTLPVAKGLKVS------SVTTARSLAR 60

Query: 61  FPHRS-----ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHP 120
            P RS       IVCEAQ+TA  V A ++ TW+SLV ES+ PV+VEFWAPWCGPCRM+HP
Sbjct: 61  SPPRSQLARPGRIVCEAQDTAVEVLAVTDQTWKSLVLESEFPVLVEFWAPWCGPCRMIHP 120

Query: 121 IIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLT 177
           +ID L+ EY GK K YK++TD +PS+A++YGIRSIPTV+IFKDGEKK+AIIGAVPK TLT
Sbjct: 121 VIDALAGEYVGKLKCYKLNTDESPSVATQYGIRSIPTVMIFKDGEKKDAIIGAVPKTTLT 180

BLAST of CSPI03G06150 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4)

HSP 1 Score: 173.7 bits (439), Expect = 1.0e-43
Identity = 93/190 (48.95%), Postives = 128/190 (67.37%), Query Frame = 1

Query: 1   MATVLDSLTLP----------CSSALASTAFSARRTSLC-LPQCRGLKIANSFTSHSLRS 60
           MA++LDS+T+            SS+ A+ + S RR S     + RGLK + S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFPHRSATIVCEAQETAAI---VPAASEATWESLVTESKLPVMVEFWAPWCGPCR 120
             +      R   I CEAQ+T A    VP  S++ W++ V ES +PV+VEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MMHPIIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPK 177
           M+HPI+D L+K++ GKFKFYK++TD +P+ A+RYGIRS+PTVIIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

BLAST of CSPI03G06150 vs. TAIR10
Match: AT4G03520.1 (AT4G03520.1 Thioredoxin superfamily protein)

HSP 1 Score: 167.2 bits (422), Expect = 9.4e-42
Identity = 82/172 (47.67%), Postives = 120/172 (69.77%), Query Frame = 1

Query: 5   LDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRSATIV 64
           L S T   SS+ ++++ S+RR    LP+  GL+I  S +  SL S     R       +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQ-PRVSRLRRAVV 73

Query: 65  CEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFK 124
           CEAQET   +   +++TW+SLV ++  PV+V+FWAPWCGPC+M+ P+++DL++ Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 177
           FYK++TD +P+   +YG+RSIPT++IF  GEKK+ IIGAVPK TLT+S++KF
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKF 184

BLAST of CSPI03G06150 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1)

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-40
Identity = 75/157 (47.77%), Postives = 111/157 (70.70%), Query Frame = 1

Query: 20  AFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRSATIVCEAQETAAIVPAASE 79
           +FS R+    LP+  GL+     T  SL S   N+R       ++CEAQ+TA  +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFKFYKVDTDANPSIASR 139
           +TW+SLV ++  PV V+FWAPWCGPC+M+ PI+++L+++Y G+FKFYK++TD +P+   +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 177
           YG+RSIPT++IF +GEKK+ IIGAV K TL  S+ KF
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKF 178

BLAST of CSPI03G06150 vs. TAIR10
Match: AT2G15570.2 (AT2G15570.2 Thioredoxin superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-22
Identity = 56/169 (33.14%), Postives = 98/169 (57.99%), Query Frame = 1

Query: 13  SSALASTAFSARR--TSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRSATI----VCE 72
           SS+ +S  F+  R  T+  +     L    SF+  SLR +   +     ++ +    +C 
Sbjct: 4   SSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCV 63

Query: 73  AQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFKFY 132
               AA     ++ +WE  V +S+ PV+VEF+  WCGPCRM+H IID+++ +Y GK   Y
Sbjct: 64  RDSRAAA--EVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCY 123

Query: 133 KVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEK 176
            ++ D +  +A  Y I+++P V++FK+GEK+E+I+G +PK    +++E+
Sbjct: 124 LLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIER 170

BLAST of CSPI03G06150 vs. TAIR10
Match: AT1G43560.1 (AT1G43560.1 thioredoxin Y2)

HSP 1 Score: 87.8 bits (216), Expect = 7.3e-18
Identity = 41/104 (39.42%), Postives = 67/104 (64.42%), Query Frame = 1

Query: 74  VPAASEATWES---LVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYEGKFKFYKVDT 133
           V AA + T+ S   L+  S  PV+V+F+A WCGPC++M PI++++S+  +      K+DT
Sbjct: 57  VRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDT 116

Query: 134 DANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASME 175
           +  PS+A++Y I ++PT I+FKDG+  +   GA+P   L   +E
Sbjct: 117 EKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIE 160

BLAST of CSPI03G06150 vs. NCBI nr
Match: gi|449431838|ref|XP_004133707.1| (PREDICTED: thioredoxin-like [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 7.7e-94
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60
           MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120
           ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKFS 178
           GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKFS
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKFS 177

BLAST of CSPI03G06150 vs. NCBI nr
Match: gi|359493854|ref|XP_002282265.2| (PREDICTED: thioredoxin M4, chloroplastic [Vitis vinifera])

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-53
Identity = 115/187 (61.50%), Postives = 138/187 (73.80%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAF-----------SARRTSLCLPQCRGLKIANSFTSHSLRS 60
           MATVLDSL +P SSAL S+AF           S RR    LP+  GLKI  S  S S+ +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 61  ARSNARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMH 120
           A  ++R   R   +VCEAQETA  VPA  +ATW+SLV ++  PV+VEFWAPWCGPCRM+H
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 121 PIIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTL 177
           P+I++L+K+Y GK K YKV+TD +PSIA+RYGIRSIPTVIIFK GEKKEAIIGAVPK TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

BLAST of CSPI03G06150 vs. NCBI nr
Match: gi|703084566|ref|XP_010092509.1| (Thioredoxin M4 [Morus notabilis])

HSP 1 Score: 216.1 bits (549), Expect = 5.0e-53
Identity = 114/186 (61.29%), Postives = 140/186 (75.27%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAFSARRTS--------LCLPQCRGLKIANSFTSHSLRSARS 60
           MATVL++LTLP   AL S   S   TS        L LPQ RGLK+A S ++ S+ S  S
Sbjct: 1   MATVLETLTLPRCFALPSRGLSPMATSSASSLVARLGLPQFRGLKVAQSLSTRSVGSVSS 60

Query: 61  --NARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHP 120
             ++R   R   IVCEAQETA  V A ++A+W+SLV +S LPV+VEFWAPWCGPCRM+HP
Sbjct: 61  GPSSRVGRRGGAIVCEAQETAVEVAAVNQASWKSLVLDSDLPVVVEFWAPWCGPCRMIHP 120

Query: 121 IIDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLT 177
           I+DDL+K+Y GK KFYKV+TD +P+IA+ YGIRSIPTVI+FKDGEKK++IIGAVPK TLT
Sbjct: 121 IVDDLAKQYVGKVKFYKVNTDDSPTIATEYGIRSIPTVIMFKDGEKKDSIIGAVPKSTLT 180

BLAST of CSPI03G06150 vs. NCBI nr
Match: gi|1009170265|ref|XP_015866106.1| (PREDICTED: thioredoxin-1 [Ziziphus jujuba])

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-51
Identity = 112/184 (60.87%), Postives = 133/184 (72.28%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALASTAFSARRTSLC--------LPQCRGLKIANSFTSHSLRSARS 60
           MATVL+SL +P  SAL S   S    S          L Q RGL++ +S  + SL S   
Sbjct: 1   MATVLESLAVPRCSALPSNTLSPVAASSISSPSGRRRLSQFRGLQLRHSLVTRSLGSVSF 60

Query: 61  NARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPII 120
            +R   R   IVCEAQETA  VPA ++A+W+S V ES  PV+VEFWAPWCGPCRM+HPII
Sbjct: 61  GSRGSRRGGLIVCEAQETAVQVPAVTDASWKSSVLESDFPVLVEFWAPWCGPCRMIHPII 120

Query: 121 DDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTAS 177
           DDL+K+Y GK K YKV+TD +PSIA++YGIRSIPTVIIFKDGEKK+AIIGAVPK TLT S
Sbjct: 121 DDLAKQYAGKLKCYKVNTDESPSIATQYGIRSIPTVIIFKDGEKKDAIIGAVPKSTLTTS 180

BLAST of CSPI03G06150 vs. NCBI nr
Match: gi|697148344|ref|XP_009628353.1| (PREDICTED: thioredoxin-like [Nicotiana tomentosiformis])

HSP 1 Score: 208.4 bits (529), Expect = 1.0e-50
Identity = 109/185 (58.92%), Postives = 138/185 (74.59%), Query Frame = 1

Query: 1   MATVLDSLTLPCSSALAST---------AFSARRTSLCLPQCRGLKIANSFTSHSLRSAR 60
           MA VL+++ +P +SAL+S          +FS RR+S+   Q RGLK+  S +  SL S  
Sbjct: 1   MAGVLETIAVPRASALSSARLAPIADSNSFSGRRSSVNFSQFRGLKVQQSRSPVSLSSTS 60

Query: 61  SNARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPI 120
            + R   R   IVCEAQETA  VPA ++ TW+SLV ES LPV+VEFWAPWCGPCRM+HP+
Sbjct: 61  YSVR---RGGRIVCEAQETAVQVPAVTDKTWKSLVIESDLPVLVEFWAPWCGPCRMIHPV 120

Query: 121 IDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTA 177
           I +LS+EY GKFKF++++TD +PS AS YGIRSIPTV+IFKDGEKK+A+IGAVPK TLT 
Sbjct: 121 IGELSQEYAGKFKFFQLNTDESPSTASEYGIRSIPTVMIFKDGEKKDAVIGAVPKTTLTT 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TRXM4_ARATH1.8e-4248.95Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2[more]
TRXM2_ORYSJ3.1e-4250.82Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0530600 PE... [more]
TRXM2_ARATH1.7e-4047.67Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2[more]
TRXM1_ORYSJ2.2e-4051.16Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE... [more]
TRXM1_ARATH2.4e-3947.77Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L5C6_CUCSA5.3e-94100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104920 PE=4 SV=1[more]
E0CSM0_VITVI9.2e-5461.50Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02890 PE=4 SV=... [more]
W9QYV9_9ROSA3.5e-5361.29Thioredoxin M4 OS=Morus notabilis GN=L484_002920 PE=4 SV=1[more]
A0A059BUW0_EUCGR1.1e-4956.08Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03319 PE=4 SV=1[more]
B9S2L1_RICCO2.0e-4859.14Thioredoxin m(Mitochondrial)-type, putative OS=Ricinus communis GN=RCOM_1209610 ... [more]
Match NameE-valueIdentityDescription
AT3G15360.11.0e-4348.95 thioredoxin M-type 4[more]
AT4G03520.19.4e-4247.67 Thioredoxin superfamily protein[more]
AT1G03680.11.4e-4047.77 thioredoxin M-type 1[more]
AT2G15570.23.7e-2233.14 Thioredoxin superfamily protein[more]
AT1G43560.17.3e-1839.42 thioredoxin Y2[more]
Match NameE-valueIdentityDescription
gi|449431838|ref|XP_004133707.1|7.7e-94100.00PREDICTED: thioredoxin-like [Cucumis sativus][more]
gi|359493854|ref|XP_002282265.2|1.3e-5361.50PREDICTED: thioredoxin M4, chloroplastic [Vitis vinifera][more]
gi|703084566|ref|XP_010092509.1|5.0e-5361.29Thioredoxin M4 [Morus notabilis][more]
gi|1009170265|ref|XP_015866106.1|1.2e-5160.87PREDICTED: thioredoxin-1 [Ziziphus jujuba][more]
gi|697148344|ref|XP_009628353.1|1.0e-5058.92PREDICTED: thioredoxin-like [Nicotiana tomentosiformis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006109 regulation of carbohydrate metabolic process
biological_process GO:0009735 response to cytokinin
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005618 cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008047 enzyme activator activity
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0019904 protein domain specific binding
molecular_function GO:0004791 thioredoxin-disulfide reductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G06150.1CSPI03G06150.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 18..176
score: 7.2
IPR005746ThioredoxinTIGRFAMsTIGR01068TIGR01068coord: 78..175
score: 1.5
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 74..175
score: 7.1
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 74..175
score: 2.27
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 77..175
score: 9.6
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 50..177
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 94..112
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 93..101
score: 1.1E-8coord: 101..110
score: 1.1E-8coord: 141..152
score: 1.
NoneNo IPR availablePANTHERPTHR10438:SF300THIOREDOXIN M1, CHLOROPLASTIC-RELATEDcoord: 18..176
score: 7.2