Carg21080 (gene) Silver-seed gourd

NameCarg21080
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionthioredoxin-like
LocationCucurbita_argyrosperma_scaffold_158 : 37941 .. 40528 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCTTCCGCCTTGGCTTCCACTGCTTTCTCCGGCCGTCGGAGCTCCGTCGCCCTCCCGCAGTACAGAGGCTTGAAGATCGGTCACAGTTTAACTTCCCAGTCTATAAGATCTGCGAGATCTAATGCCAGATTTGCTCAGCGTTCTGGAAGAATCGTCTGCGAAGCTCAGGAAACTGCTGCCATTGGTTGGGATTTTGTTCTGCAATTTTCTTTTTCTGTCTTTTTCTGTTGTTTGGAGGGTAGAAGAAAGGAAATTTTAACAATACTAGAAAGTTTGATGAATTTAAGAGCATGCTGTTAGTATCTACTGGTGTTTGGTTTGGTTTAGATTCGCATGAAACTCATCGTGTCTCCAATTAGTAAACAATATGATAGAGCTCCACTAGAGTTAACTTATAAGCGTCAGCTTAAGGCACGTTTAACCTATTCAGTATATGCTTAATATAAATTAGAGAGAAAGGAAAGATAAAAGAAAGAATGAGATCAGTTGTTGGAGTGATGTTGACATGATATGACAAATCATTTTCTGTTTGAATTTATGTACTTGTCATATTTTTGTACTCTGATACCTGACGGATATATGGATGTTGCGTATTCCCATCCATGCACATGCTTGGATATGATGTAAATTACTGTGATGAATTTTGATGTCGAATGACTCTTCAAGTGCTTAAAAAAGTACTTTTGAGTGAAAAGAGATGCTTTTAAGCACTAAAAAAGCAATTCTAAAGAGCCTTAATTGGACCTTATAAATGTGTTTCAGTTTGAGCATTAAAATTGTTTACGAATCACTCCATTAACCATAAAGATCGATCATATAGAGTTGTTTACACACATTTAGCTTCCAAATATTTTAATATGATATTGTTTTGAGCCAATATCAGGCCTGCTCCATACCTCTCCAGTGGAGGATTTCTGTGTTTGATGCTGTTAGAAGAGAGGTGCCTCCAGTACCAACTTAAGCAGAAAATGAGGGGAATGTACTGCATATTATTAAGGGTTCGTGTGTGGTATATATATATTATATGAGATTGGAGTAATTTTTTGTTTTGTTATGTCTTTAGTTTGGCTCCGGTCTCTAGGATGAATATATGTAAGGCCTTTTATATGATTTCCCCCCCCCCCCCCCCCCCCTCTCCAGTTCGTTAATATATGTTATTACCTGAGAGGCTGAGATGATGCCCTAGGCAATCAGTAGACTCTCAATCGGTGAGTGTCAAACCTATTCAGTCAATGCACCCTTGACCGGGACCGAGATCTCTGACTGAAAGAGATGGTCTCTGGGCGGGAGGTTGTCACTTAGCATTAGGAGTAGTAGTTGCCAATTGAGAAGATGGTTTCTGCTGTGCCTAGGTCTTAATGATGCTACAGAGAGTGGTCAGTAAGGAGCTGGTCTGATATTGGCTCAATATGTTGGGAGAAAGTGTTCTAATTGTCTCTCTCCTGGTTCTGCCCAGTTCCGCCATCCCTCTCTTTTGTGTGTGTATGAGTGAGCCTGTTTCTTTATGTATCTTGGTTTGCATAGGAGCCAGTGTTTATCTTGTATGGCATGAAGTACATAATCATTTACAATAGGTACAACGTCGAAATTATAACATGCATGTGTTGGTGGTTGTTGTTCCTGCACGTTTTATTTTGATTGTTATCTTACATCATTGCTATGAAATAACAGCTGTTTAAGCATCAAAAGGTGTAAGAAATGTTGCATTTCAGGTACCTTTATATCCTATTACACACACTTATGCACATACACACACTTTGTCCGTGGTGTATATAGCTCAGAAGTATTGTCTAACTGCTTGTCAATTTTTGAAAAATGTAATTCAATTAGAGAGTTCCGACTGTTTTTATATTGGGGAGCTAACTTATTTCAATTTTTATTAGATCATGGGATGGGGGCATAGAAATTTTCTGTTTGAACCTTTCAACTGACTCTGAGTTCAGGTCTTTGTATCATTGGTTGTACTTTTTTTTTTCTTGATCACTTGCTTTGATGTTGATATTAATCCTGGAGAGTCACAGTACTGGAATCATTTTCTAGTCTGATCATTATAGGAACTTGTTATCCATAAAATTATGCTTTAATCTATGTTCTGTTTTGACTCTTCTCTGCTGGCTACCTGATTCTTGGGTCAATAATATTACCTACACCTACTTTTTCTGTCTCTCGAACTTTCTTCTCCCCGAAAAGGGCCCTTGTTGAGCTTACAAGAAATCACATGTTTGTCGAATGTTTCAGTACCTGCTGCTTCAGAAGCTACCTGGGATTCACTGGTTCTTAAATCCGAATTACCCGTCCTAGTCGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCGTTGACGAACTATCTAAACAGTATGCTGGTAAGTTCAAATTTTACAAGGTGGATACTGATAGCAACTCTGGTGTTGCATCCCGATATGGTATCAGAAGCATACCAACTGTCATTATCTTCAAAGATGGTGAGAAAAAGGAGGCAATAATAGGTGCAGTTCCCAAAGCAACTTTGACTGCCAGCATTGAAAAATTCTTGTAG

mRNA sequence

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCTTCCGCCTTGGCTTCCACTGCTTTCTCCGGCCGTCGGAGCTCCGTCGCCCTCCCGCAGTACAGAGGCTTGAAGATCGGTCACAGTTTAACTTCCCAGTCTATAAGATCTGCGAGATCTAATGCCAGATTTGCTCAGCGTTCTGGAAGAATCGTCTGCGAAGCTCAGGAAACTGCTGCCATTGTACCTGCTGCTTCAGAAGCTACCTGGGATTCACTGGTTCTTAAATCCGAATTACCCGTCCTAGTCGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCGTTGACGAACTATCTAAACAGTATGCTGGTAAGTTCAAATTTTACAAGGTGGATACTGATAGCAACTCTGGTGTTGCATCCCGATATGGTATCAGAAGCATACCAACTGTCATTATCTTCAAAGATGGTGAGAAAAAGGAGGCAATAATAGGTGCAGTTCCCAAAGCAACTTTGACTGCCAGCATTGAAAAATTCTTGTAG

Coding sequence (CDS)

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCTTCCGCCTTGGCTTCCACTGCTTTCTCCGGCCGTCGGAGCTCCGTCGCCCTCCCGCAGTACAGAGGCTTGAAGATCGGTCACAGTTTAACTTCCCAGTCTATAAGATCTGCGAGATCTAATGCCAGATTTGCTCAGCGTTCTGGAAGAATCGTCTGCGAAGCTCAGGAAACTGCTGCCATTGTACCTGCTGCTTCAGAAGCTACCTGGGATTCACTGGTTCTTAAATCCGAATTACCCGTCCTAGTCGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCGTTGACGAACTATCTAAACAGTATGCTGGTAAGTTCAAATTTTACAAGGTGGATACTGATAGCAACTCTGGTGTTGCATCCCGATATGGTATCAGAAGCATACCAACTGTCATTATCTTCAAAGATGGTGAGAAAAAGGAGGCAATAATAGGTGCAGTTCCCAAAGCAACTTTGACTGCCAGCATTGAAAAATTCTTGTAG

Protein sequence

MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL
BLAST of Carg21080 vs. NCBI nr
Match: XP_022929416.1 (uncharacterized protein LOC111435994 [Cucurbita moschata])

HSP 1 Score: 344.7 bits (883), Expect = 1.8e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

BLAST of Carg21080 vs. NCBI nr
Match: XP_022984702.1 (uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharacterized protein LOC111810091 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 5.3e-91
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHS TSQSIRSARSNARFAQRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

BLAST of Carg21080 vs. NCBI nr
Match: XP_004133707.1 (PREDICTED: thioredoxin-like [Cucumis sativus] >KGN56239.1 hypothetical protein Csa_3G104920 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76
Identity = 146/176 (82.95%), Postives = 161/176 (91.48%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFS RR+S+ LPQ RGLKI +S TS S+RSARSNARF  RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
             IVCEAQETAAIVPAASEATW+SLV +S+LPV+VEFWAPWCGPCRM+HPI+D+LSK+Y 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKF 177
           GKFKFYKVDTD+N  +ASRYGIRSIPTVIIFKDGEKKEAIIGAVPK TLTAS+EKF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

BLAST of Carg21080 vs. NCBI nr
Match: XP_022142885.1 (uncharacterized protein LOC111012890 [Momordica charantia])

HSP 1 Score: 287.0 bits (733), Expect = 4.5e-74
Identity = 140/178 (78.65%), Postives = 164/178 (92.13%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ+RGLKI HS TS SIRSARS++RFA R
Sbjct: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSLALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60

Query: 61  SGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQY 120
           SGRIVCEAQET A+VPAA+EATW SLV++SELPVLVEFWAPWCGPCRMIHP++D LS +Y
Sbjct: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESELPVLVEFWAPWCGPCRMIHPLIDALSSEY 120

Query: 121 AGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           +G+FKFYKV+TD N+ +ASRYGIRSIPTVIIFK GEKKEA+IGAVPK+TL AS++KFL
Sbjct: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 178

BLAST of Carg21080 vs. NCBI nr
Match: XP_022941602.1 (uncharacterized protein LOC111446910 isoform X1 [Cucurbita moschata])

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 136/177 (76.84%), Postives = 157/177 (88.70%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60
           MATVLDSL LP SS LAST FSGRR+S+ALP+YR LK+GHS TS SI+SARSNARF  RS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GR+VCE QET++IVP+ASEATW S V++S +PVLVEFWAPWCGPCRMIHP+VDELS +YA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           GKFKFYKV+TD  +G+AS+  IRSIPTVIIFK+GEKKEAIIGAVPK TLT S++KFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

BLAST of Carg21080 vs. TAIR10
Match: AT3G15360.1 (thioredoxin M-type 4)

HSP 1 Score: 191.8 bits (486), Expect = 3.6e-49
Identity = 103/191 (53.93%), Postives = 134/191 (70.16%), Query Frame = 0

Query: 1   MATVLDSLTL----------PCSSALASTAFSGRRSSVA-LPQYRGLKIGHSLTSQSIRS 60
           MA++LDS+T+            SS+ A+ + S RR S A   ++RGLK   SL +QS   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFAQRSGRIVCEAQETAAI---VPAASEATWDSLVLKSELPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+T A    VP  S++ W + VL+S++PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPK 178
           MIHPIVD+L+K +AGKFKFYK++TD +   A+RYGIRS+PTVIIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

BLAST of Carg21080 vs. TAIR10
Match: AT4G03520.1 (Thioredoxin superfamily protein)

HSP 1 Score: 174.1 bits (440), Expect = 7.7e-44
Identity = 86/173 (49.71%), Postives = 122/173 (70.52%), Query Frame = 0

Query: 5   LDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRSGRIV 64
           L S T   SS+ ++++ S RR    LP+  GL+I  SL+  S+ S     R ++    +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVV 73

Query: 65  CEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFK 124
           CEAQET   +   +++TWDSLVLK+  PV+V+FWAPWCGPC+MI P+V++L++ Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           FYK++TD +     +YG+RSIPT++IF  GEKK+ IIGAVPK TLT+S++KFL
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

BLAST of Carg21080 vs. TAIR10
Match: AT1G03680.1 (thioredoxin M-type 1)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-43
Identity = 82/158 (51.90%), Postives = 115/158 (72.78%), Query Frame = 0

Query: 20  AFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRSGRIVCEAQETAAIVPAASE 79
           +FS R+    LP+  GL+     T  S+ S   N+R ++    ++CEAQ+TA  +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASR 139
           +TWDSLVLK++ PV V+FWAPWCGPC+MI PIV+EL+++YAG+FKFYK++TD +     +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           YG+RSIPT++IF +GEKK+ IIGAV K TL  SI KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

BLAST of Carg21080 vs. TAIR10
Match: AT2G15570.2 (Thioredoxin superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 55/141 (39.01%), Postives = 90/141 (63.83%), Query Frame = 0

Query: 41  SLTSQSIRSARSNARFAQRSGRI----VCEAQETAAIVPAASEATWDSLVLKSELPVLVE 100
           S + +S+R +   +  +  + R+    +C     AA     ++ +W+  VLKSE PVLVE
Sbjct: 34  SFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAA--AEVTQRSWEDSVLKSETPVLVE 93

Query: 101 FWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEK 160
           F+  WCGPCRM+H I+DE++  YAGK   Y ++ D++  VA  Y I+++P V++FK+GEK
Sbjct: 94  FYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEK 153

Query: 161 KEAIIGAVPKATLTASIEKFL 178
           +E+I+G +PK    ++IE+ L
Sbjct: 154 RESIMGTMPKEFYISAIERVL 172

BLAST of Carg21080 vs. TAIR10
Match: AT1G76760.1 (thioredoxin Y1)

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17
Identity = 41/104 (39.42%), Postives = 66/104 (63.46%), Query Frame = 0

Query: 77  ASEATWDS---LVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSN 136
           A + T+DS   L++ S+ PVLV+++A WCGPC+ + PI++E+S+    K +  K+DT+  
Sbjct: 65  AKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKY 124

Query: 137 SGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
             +A++Y I ++PT I+FKDGE  +   GA+    L   IE  L
Sbjct: 125 PSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSL 168

BLAST of Carg21080 vs. Swiss-Prot
Match: sp|Q9SEU6|TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 6.4e-48
Identity = 103/191 (53.93%), Postives = 134/191 (70.16%), Query Frame = 0

Query: 1   MATVLDSLTL----------PCSSALASTAFSGRRSSVA-LPQYRGLKIGHSLTSQSIRS 60
           MA++LDS+T+            SS+ A+ + S RR S A   ++RGLK   SL +QS   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFAQRSGRIVCEAQETAAI---VPAASEATWDSLVLKSELPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+T A    VP  S++ W + VL+S++PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPK 178
           MIHPIVD+L+K +AGKFKFYK++TD +   A+RYGIRS+PTVIIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

BLAST of Carg21080 vs. Swiss-Prot
Match: sp|Q9SEU8|TRXM2_ARATH (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g03520 PE=1 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 86/173 (49.71%), Postives = 122/173 (70.52%), Query Frame = 0

Query: 5   LDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRSGRIV 64
           L S T   SS+ ++++ S RR    LP+  GL+I  SL+  S+ S     R ++    +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVV 73

Query: 65  CEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFK 124
           CEAQET   +   +++TWDSLVLK+  PV+V+FWAPWCGPC+MI P+V++L++ Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           FYK++TD +     +YG+RSIPT++IF  GEKK+ IIGAVPK TLT+S++KFL
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

BLAST of Carg21080 vs. Swiss-Prot
Match: sp|O48737|TRXM1_ARATH (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-42
Identity = 82/158 (51.90%), Postives = 115/158 (72.78%), Query Frame = 0

Query: 20  AFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRSGRIVCEAQETAAIVPAASE 79
           +FS R+    LP+  GL+     T  S+ S   N+R ++    ++CEAQ+TA  +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASR 139
           +TWDSLVLK++ PV V+FWAPWCGPC+MI PIV+EL+++YAG+FKFYK++TD +     +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           YG+RSIPT++IF +GEKK+ IIGAV K TL  SI KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

BLAST of Carg21080 vs. Swiss-Prot
Match: sp|Q9XGS0|TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.9e-42
Identity = 82/164 (50.00%), Postives = 116/164 (70.73%), Query Frame = 0

Query: 15  ALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQ-RSGRIVCEAQETAAI 74
           +L S        +V+L   +   +G   T  S+ S   N+R ++ R G I+CEAQ+TA  
Sbjct: 13  SLRSEMMIASSKTVSLSTRQMFSVGGLRTRVSLSSVSKNSRASRLRRGGIICEAQDTATG 72

Query: 75  VPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSN 134
           +P  +++TW+SLVLK++ PV+V+FWAPWCGPC+MI PIV+EL++QY GK KF+K++TD +
Sbjct: 73  IPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDS 132

Query: 135 SGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
                +YG+RSIPT++IF  GEKK+ IIGAVPK TL  SI+KFL
Sbjct: 133 PATPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSIDKFL 176

BLAST of Carg21080 vs. Swiss-Prot
Match: sp|Q7X8R5|TRXM2_ORYSJ (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.8e-41
Identity = 93/182 (51.10%), Postives = 127/182 (69.78%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALAS---TAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFA 60
           MA+ L + T  CSS LAS      S RR   A+P  RG++   +L + S      N R  
Sbjct: 1   MASALAASTAVCSSPLASXXXXXXSARRLR-AVPPSRGIRY-QALRADS--GFAGNRRGG 60

Query: 61  QRSGRIVC--EAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDEL 120
            R   +VC  + Q+T+  VP  +++TW SLV++SELPVLV +WA WCGPC+MI P+V +L
Sbjct: 61  GRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKL 120

Query: 121 SKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEK 178
           SK+Y GK K YK++TD N  +AS+YG+RSIPT++IFK+GEKK+A+IGAVP++TL ASIEK
Sbjct: 121 SKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEK 178

BLAST of Carg21080 vs. TrEMBL
Match: tr|A0A0A0L5C6|A0A0A0L5C6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.4e-76
Identity = 146/176 (82.95%), Postives = 161/176 (91.48%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFS RR+S+ LPQ RGLKI +S TS S+RSARSNARF  RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
             IVCEAQETAAIVPAASEATW+SLV +S+LPV+VEFWAPWCGPCRM+HPI+D+LSK+Y 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKF 177
           GKFKFYKVDTD+N  +ASRYGIRSIPTVIIFKDGEKKEAIIGAVPK TLTAS+EKF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

BLAST of Carg21080 vs. TrEMBL
Match: tr|E0CSM0|E0CSM0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g02890 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.7e-58
Identity = 121/188 (64.36%), Postives = 144/188 (76.60%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALASTAF-----------SGRRSSVALPQYRGLKIGHSLTSQSIRS 60
           MATVLDSL +P SSAL S+AF           SGRR    LP++ GLKI  SL S+S+ +
Sbjct: 1   MATVLDSLAVPRSSALPSSAFAPIASSPVCFLSGRRGLARLPEFSGLKIQPSLASRSVAA 60

Query: 61  ARSNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIH 120
           A  ++R  +R G +VCEAQETA  VPA  +ATW SLVL ++ PVLVEFWAPWCGPCRMIH
Sbjct: 61  AGRSSRVGRRVGGVVCEAQETAVEVPAVIDATWQSLVLDADTPVLVEFWAPWCGPCRMIH 120

Query: 121 PIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATL 178
           P+++EL+KQY GK K YKV+TD +  +A+RYGIRSIPTVIIFK GEKKEAIIGAVPK+TL
Sbjct: 121 PVINELAKQYTGKLKCYKVNTDESPSIATRYGIRSIPTVIIFKSGEKKEAIIGAVPKSTL 180

BLAST of Carg21080 vs. TrEMBL
Match: tr|A0A2N9ENA3|A0A2N9ENA3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4155 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-55
Identity = 116/186 (62.37%), Postives = 145/186 (77.96%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSAL---------ASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSAR 60
           MATVL+SLT+P SSAL         A+++ S   S+  LP + GLK+  S T++S+ S  
Sbjct: 1   MATVLESLTVPRSSALLPSFTRSHIAASSVSS-LSARRLPLFTGLKVKQSFTARSLGSVT 60

Query: 61  SNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPI 120
           S++R A+R G +VCEAQ+TA  VPA ++  W SLVL+SE PVLVEFWAPWCGPCRMIHPI
Sbjct: 61  SSSRLARRGGLVVCEAQDTAIEVPAITDENWQSLVLESESPVLVEFWAPWCGPCRMIHPI 120

Query: 121 VDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTA 178
           +DEL+KQY GK K YKV+TD +S +A+RYGIRSIPTVIIFK+GEKK+ +IGAVPK+TLT 
Sbjct: 121 IDELAKQYVGKLKCYKVNTDESSSIATRYGIRSIPTVIIFKNGEKKDTVIGAVPKSTLTT 180

BLAST of Carg21080 vs. TrEMBL
Match: tr|W9QYV9|W9QYV9_9ROSA (Thioredoxin M4 OS=Morus notabilis OX=981085 GN=L484_002920 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.1e-55
Identity = 117/187 (62.57%), Postives = 144/187 (77.01%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVA--------LPQYRGLKIGHSLTSQSIRSARS 60
           MATVL++LTLP   AL S   S   +S A        LPQ+RGLK+  SL+++S+ S  S
Sbjct: 1   MATVLETLTLPRCFALPSRGLSPMATSSASSLVARLGLPQFRGLKVAQSLSTRSVGSVSS 60

Query: 61  --NARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHP 120
             ++R  +R G IVCEAQETA  V A ++A+W SLVL S+LPV+VEFWAPWCGPCRMIHP
Sbjct: 61  GPSSRVGRRGGAIVCEAQETAVEVAAVNQASWKSLVLDSDLPVVVEFWAPWCGPCRMIHP 120

Query: 121 IVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLT 178
           IVD+L+KQY GK KFYKV+TD +  +A+ YGIRSIPTVI+FKDGEKK++IIGAVPK+TLT
Sbjct: 121 IVDDLAKQYVGKVKFYKVNTDDSPTIATEYGIRSIPTVIMFKDGEKKDSIIGAVPKSTLT 180

BLAST of Carg21080 vs. TrEMBL
Match: tr|A0A1S4DRW2|A0A1S4DRW2_TOBAC (thioredoxin-like OS=Nicotiana tabacum OX=4097 GN=LOC107832514 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.0e-55
Identity = 113/186 (60.75%), Postives = 144/186 (77.42%), Query Frame = 0

Query: 1   MATVLDSLTLPCSSALA---------STAFSGRRSSVALPQYRGLKIGHSLTSQSIRSAR 60
           MA VL+++ +P +SAL+         S +FSGRRSSV   Q+RGLK+  S +  S+ S  
Sbjct: 1   MAGVLETIAVPRASALSSARLAPIADSNSFSGRRSSVNFSQFRGLKVQQSRSPVSLSSTS 60

Query: 61  SNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPI 120
           ++ R   R GRIVCEAQETA  VPA ++ TW SLV++S+LPVLVEFWAPWCGPCRMIHP+
Sbjct: 61  NSVR---RGGRIVCEAQETAVQVPAVTDKTWKSLVIESDLPVLVEFWAPWCGPCRMIHPV 120

Query: 121 VDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTA 178
           + ELS++YAGKFKF++++TD +   AS YGIRSIPTV+IFKDGEKK+A+IGAVPK TLT 
Sbjct: 121 IGELSQEYAGKFKFFQLNTDESPSTASEYGIRSIPTVMIFKDGEKKDAVIGAVPKTTLTT 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022929416.11.8e-91100.00uncharacterized protein LOC111435994 [Cucurbita moschata][more]
XP_022984702.15.3e-9199.44uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharac... [more]
XP_004133707.12.1e-7682.95PREDICTED: thioredoxin-like [Cucumis sativus] >KGN56239.1 hypothetical protein C... [more]
XP_022142885.14.5e-7478.65uncharacterized protein LOC111012890 [Momordica charantia][more]
XP_022941602.11.6e-7176.84uncharacterized protein LOC111446910 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT3G15360.13.6e-4953.93thioredoxin M-type 4[more]
AT4G03520.17.7e-4449.71Thioredoxin superfamily protein[more]
AT1G03680.11.3e-4351.90thioredoxin M-type 1[more]
AT2G15570.23.2e-2639.01Thioredoxin superfamily protein[more]
AT1G76760.12.1e-1739.42thioredoxin Y1[more]
Match NameE-valueIdentityDescription
sp|Q9SEU6|TRXM4_ARATH6.4e-4853.93Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ... [more]
sp|Q9SEU8|TRXM2_ARATH1.4e-4249.71Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g03520 PE=1 ... [more]
sp|O48737|TRXM1_ARATH2.4e-4251.90Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=2 ... [more]
sp|Q9XGS0|TRXM_BRANA6.9e-4250.00Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1[more]
sp|Q7X8R5|TRXM2_ORYSJ5.8e-4151.10Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0L5C6|A0A0A0L5C6_CUCSA1.4e-7682.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920 PE=4 SV=1[more]
tr|E0CSM0|E0CSM0_VITVI1.7e-5864.36Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g02890 PE=4 SV=... [more]
tr|A0A2N9ENA3|A0A2N9ENA3_FAGSY2.4e-5562.37Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4155 PE=4 SV=1[more]
tr|W9QYV9|W9QYV9_9ROSA3.1e-5562.57Thioredoxin M4 OS=Morus notabilis OX=981085 GN=L484_002920 PE=4 SV=1[more]
tr|A0A1S4DRW2|A0A1S4DRW2_TOBAC4.0e-5560.75thioredoxin-like OS=Nicotiana tabacum OX=4097 GN=LOC107832514 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR017937Thioredoxin_CS
IPR005746Thioredoxin
IPR013766Thioredoxin_domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21080-RACarg21080-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 93..101
score: 64.57
coord: 141..152
score: 42.59
coord: 101..110
score: 61.5
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 74..177
e-value: 1.1E-35
score: 123.8
NoneNo IPR availablePANTHERPTHR10438:SF300THIOREDOXIN M1, CHLOROPLASTIC-RELATEDcoord: 13..177
NoneNo IPR availableCDDcd02947TRX_familycoord: 80..174
e-value: 1.93715E-40
score: 133.067
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 77..175
e-value: 2.0E-31
score: 107.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 68..177
score: 14.924
IPR005746ThioredoxinTIGRFAMTIGR01068TIGR01068coord: 78..176
e-value: 7.0E-37
score: 123.6
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 13..177
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 94..112
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 74..177