Cp4.1LG01g07980 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g07980
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCASP-like protein
LocationCp4.1LG01 : 5147747 .. 5148797 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAAGCCATCATTTCGAGCACAGAAAAAGACCAAAGAAAAGCAGAGCCCACACCCACTAATCCATCCATTCTCACTCCAAAAAGGGGCAAGGAAGTTGGGAGCAAATTTCTCGCCTTTCACACTTCTTTACTCTTCTTCTTATTTCCCCAAATCCCTCAAACACACCTGTTCTTCACTCCATCATCGCTTCACCCAATCAAAAATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTCCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTAACCAACTATCTATTTACATCAAATTTCTTCATCTGGGTCTGCTCCAAATTTAAATCCGGTAATGGGTTTTGATTCATTGTTAGGTACATGGTCTCCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCGGCGTTTTCTTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGGTTTATACAATTCCGTCCATTCCCATTTGAATTCATTTCTGTAATTGAATTTGTTGTGTGATGGGTGGTTCAGATTGTGGCTTATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTACGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGAGAAGATGAAGATGGCTCTGGTCTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTCGTCTCTGCTTTTAGGGCTTTTCGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAGATTCTGCTTTTACTTCAAATTCTGAGATTTGTAATGCCTTTGCCAATTACTGTTATGTTTGTTGTATCAAATAAGAAAGTGTAAAAGTGGTTGCTTTTCATTTGCATAATGGTGAACAACATAATGGCATCACTCAAATTATTGGTTA

mRNA sequence

CGGAAGCCATCATTTCGAGCACAGAAAAAGACCAAAGAAAAGCAGAGCCCACACCCACTAATCCATCCATTCTCACTCCAAAAAGGGGCAAGGAAGTTGGGAGCAAATTTCTCGCCTTTCACACTTCTTTACTCTTCTTCTTATTTCCCCAAATCCCTCAAACACACCTGTTCTTCACTCCATCATCGCTTCACCCAATCAAAAATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTCCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTACATGGTCTCCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCGGCGTTTTCTTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTACGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGAGAAGATGAAGATGGCTCTGGTCTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTCGTCTCTGCTTTTAGGGCTTTTCGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAGATTCTGCTTTTACTTCAAATTCTGAGATTTGTAATGCCTTTGCCAATTACTGTTATGTTTGTTGTATCAAATAAGAAAGTGTAAAAGTGGTTGCTTTTCATTTGCATAATGGTGAACAACATAATGGCATCACTCAAATTATTGGTTA

Coding sequence (CDS)

ATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTCCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTACATGGTCTCCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCGGCGTTTTCTTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTACGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGAGAAGATGAAGATGGCTCTGGTCTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTCGTCTCTGCTTTTAGGGCTTTTCGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAG

Protein sequence

MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQHLQHQSN
Homology
[Close]
BLAST of Cp4.1LG01g07980 vs. Swiss-Prot
Match: CSPL3_VITVI (CASP-like protein 2D1 OS=Vitis vinifera GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.5e-52
Identity = 105/170 (61.76%), Postives = 131/170 (77.06%), Query Frame = 1 

Query: 8   HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAA 67
           H P LKL+D SLRL  +PL++A+I LTVTN+QDN  YG LEF NL+GLKYMV IS I+A 
Sbjct: 14  HIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCISGISAG 73

Query: 68  YALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYS 127
           YAL A   SW+RC   KAW+FFVSDQI+AYLMVTS AAV EILYLAY GDR VSWSEA S
Sbjct: 74  YALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACS 133

Query: 128 TYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQHLQHQ 178
           +YG+FC ++ +AL   AL   CF V+AV+SA+R F +F+PP+ S+ ++ +
Sbjct: 134 SYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEVEEE 183

[Close]
BLAST of Cp4.1LG01g07980 vs. Swiss-Prot
Match: CSPL4_SOYBN (CASP-like protein 2D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.7e-51
Identity = 103/171 (60.23%), Postives = 134/171 (78.36%), Query Frame = 1 

Query: 6   NPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIA 65
           N H P+L   D SLRL ++PL++A++ +TVTN++DN  YG L+++NLS LKYMV +SA+ 
Sbjct: 13  NHHLPMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALC 72

Query: 66  AAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A YAL AAA S +RCF +KAW+FFVSDQIVAYL +TSVAAV E+ YLAY G +E SWSEA
Sbjct: 73  ACYALLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEA 132

Query: 126 YSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPP-LPSQHLQ 176
            S+YG FC K+K+AL+   + F CFFV+AV+SAFRAF +FDPP + SQ +Q
Sbjct: 133 CSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQEVQ 183

[Close]
BLAST of Cp4.1LG01g07980 vs. Swiss-Prot
Match: CSPLC_POPTR (CASP-like protein 2D1 OS=Populus trichocarpa GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.1e-51
Identity = 102/159 (64.15%), Postives = 127/159 (79.87%), Query Frame = 1 

Query: 11  ILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAYAL 70
           +LKLLD SLRL  +PL++A+I LTVTN+QDN  YG L++ +L+GLKYMV IS I A+YA 
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 71  FAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTYG 130
            AA  +W+RC   K W+FFVSDQIVAYLMVTS  AV EILYLAY GDREVSWSEA ++YG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 131 KFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPL 170
           KFC +MK+A++  AL   CF ++AV+SA+RAF IF+PPL
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPL 159

[Close]
BLAST of Cp4.1LG01g07980 vs. Swiss-Prot
Match: CSPL7_RICCO (CASP-like protein 2D1 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-47
Identity = 97/163 (59.51%), Postives = 124/163 (76.07%), Query Frame = 1 

Query: 10  PILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAYA 69
           P+LKLLD SLR+  +PL+ A+I LTVTN QDN  YG L++ N+ GLKYMV ISAI A+YA
Sbjct: 3   PLLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYA 62

Query: 70  LFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
             AA   W++C   K W+FFVSDQI+AYLMVTSVAA  EILY+AY GD++V+WSEA ++Y
Sbjct: 63  FVAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSY 122

Query: 130 GKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQ 173
           GKFC  MK AL+  AL    F V+AV+SA+RAF ++ PP+ S+
Sbjct: 123 GKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSK 165

[Close]
BLAST of Cp4.1LG01g07980 vs. Swiss-Prot
Match: CSPLX_ARATH (CASP-like protein 2D1 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-39
Identity = 83/164 (50.61%), Postives = 114/164 (69.51%), Query Frame = 1 

Query: 9   PPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQ 173
           Y  +C K+ +AL         F  ++V+SA+RAF  FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

[Close]
BLAST of Cp4.1LG01g07980 vs. TrEMBL
Match: A0A0A0L6A1_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.3e-59
Identity = 124/171 (72.51%), Postives = 139/171 (81.29%), Query Frame = 1 

Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVS 60
           M ET++P   + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+V 
Sbjct: 1   MTETNSPS--LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPS 172
           SWSEA S+YGKFC  MKMAL+FQALGF CFF +A++SAFRAF +F PPL S
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

[Close]
BLAST of Cp4.1LG01g07980 vs. TrEMBL
Match: A0A0B0PVY5_GOSAR (CASP-like protein OS=Gossypium arboreum GN=F383_12077 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.6e-51
Identity = 110/170 (64.71%), Postives = 133/170 (78.24%), Query Frame = 1 

Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMV  S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTW 127

Query: 123 SEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQ 173
           SEA  +YGKFC KMK+AL+  AL   CF V+A++SA+R F  FDPP  S+
Sbjct: 128 SEACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSK 177

[Close]
BLAST of Cp4.1LG01g07980 vs. TrEMBL
Match: I3S6M6_MEDTR (CASP-like protein OS=Medicago truncatula GN=MTR_0160s0040 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.6e-51
Identity = 101/159 (63.52%), Postives = 130/159 (81.76%), Query Frame = 1 

Query: 10  PILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAYA 69
           P+LKLLD SLRL SVPL++A+I +TVTN+QDN  YGTL++ ++SGLKYM+ +SA+ A YA
Sbjct: 17  PMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISGLKYMIFVSALCAGYA 76

Query: 70  LFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
           + AA  SW+R    KAW+FF+SDQ+VAYLMVTS+AA  EI YLAY G RE SWS+A S+Y
Sbjct: 77  IVAAVCSWVRYLMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAYNGAREDSWSQACSSY 136

Query: 130 GKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPP 169
           GKFC K+K+AL+   + FGCFFV+A++SAFRAF +FDPP
Sbjct: 137 GKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPP 175

[Close]
BLAST of Cp4.1LG01g07980 vs. TrEMBL
Match: A0A0D2SI79_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_009G440300 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.1e-50
Identity = 108/170 (63.53%), Postives = 134/170 (78.82%), Query Frame = 1 

Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL G+KYMV  S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++++W
Sbjct: 68  AICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITW 127

Query: 123 SEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQ 173
           SEA S+YGKFC +MK+AL+  AL   CF V+A++SA+R F  FDPP  S+
Sbjct: 128 SEACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPPFFSK 177

[Close]
BLAST of Cp4.1LG01g07980 vs. TrEMBL
Match: A0A151QLU6_CAJCA (CASP-like protein OS=Cajanus cajan GN=KK1_048568 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-49
Identity = 103/163 (63.19%), Postives = 131/163 (80.37%), Query Frame = 1 

Query: 6   NPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIA 65
           N H  +LKL D SLRL +VPL++A+I +TVTN+QDN  YG L+++NLSGLKYMV +SA+ 
Sbjct: 13  NQHLLMLKLFDSSLRLCAVPLSVATIWITVTNQQDNSSYGMLKYNNLSGLKYMVLVSALC 72

Query: 66  AAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A+YAL AAA SW+R F +KAW+FFVSDQIVAYL +TSVAAV EI YLAY G +E SWS+A
Sbjct: 73  ASYALVAAACSWVRYFVSKAWIFFVSDQIVAYLTITSVAAVMEIYYLAYNGAKEDSWSQA 132

Query: 126 YSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPP 169
            S+YG+FC K+K+ L+   + F CFF +AV+SAFRAF +FDPP
Sbjct: 133 CSSYGRFCSKVKLVLILHVITFFCFFFLAVISAFRAFSVFDPP 175

[Close]
BLAST of Cp4.1LG01g07980 vs. TAIR10
Match: AT5G54980.1 (AT5G54980.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 164.1 bits (414), Expect = 8.0e-41
Identity = 83/164 (50.61%), Postives = 114/164 (69.51%), Query Frame = 1 

Query: 9   PPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQ 173
           Y  +C K+ +AL         F  ++V+SA+RAF  FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

[Close]
BLAST of Cp4.1LG01g07980 vs. TAIR10
Match: AT1G17200.1 (AT1G17200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 94.7 bits (234), Expect = 6.0e-20
Identity = 49/160 (30.63%), Postives = 97/160 (60.62%), Query Frame = 1 

Query: 12  LKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAYALF 71
           ++  +  LRL  V L +A++ + + + + N ++G++ + NL+  +Y+V  + I A Y+L 
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLL 89

Query: 72  AAAFSWLRCFAA---KAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 131
           +AA + +   ++   + W FF  DQ++ YL++ + A   E+LYLAY GD  ++WS+A S+
Sbjct: 90  SAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSS 149

Query: 132 YGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPP 169
           YG FC +   +++        + V++++S+++ F  FDPP
Sbjct: 150 YGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPP 188

[Close]
BLAST of Cp4.1LG01g07980 vs. TAIR10
Match: AT3G14380.1 (AT3G14380.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 84.7 bits (208), Expect = 6.2e-17
Identity = 50/159 (31.45%), Postives = 93/159 (58.49%), Query Frame = 1 

Query: 13  KLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAYALFA 72
           K  +  LR+ S+ L+I  + + + N   N ++G++ + N+    Y+VS + + AAY+L +
Sbjct: 21  KSAEAVLRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLS 80

Query: 73  A-AFSWLRCFAAKAWV--FFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 132
           A A   L C  +K  V   F+ DQ+V Y+++ + A   E +YLAYYG+  ++WS A  +Y
Sbjct: 81  ALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSY 140

Query: 133 GKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPP 169
           G FC    +++VF  +    + +++++S++R F  F+ P
Sbjct: 141 GSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

[Close]
BLAST of Cp4.1LG01g07980 vs. TAIR10
Match: AT4G16442.1 (AT4G16442.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09
Identity = 43/164 (26.22%), Postives = 79/164 (48.17%), Query Frame = 1 

Query: 12  LKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYG---TLEFHNLSGLKYMVSISAIAAAY 71
           ++L ++ LR       + ++ L VT+ +    +    T ++ ++  + ++V  + IAA Y
Sbjct: 8   MRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVY 67

Query: 72  ALFAAAFSWLRCFAAK-------AWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVS 131
           +L  +    +     K       AW FF  DQ +AYL V ++AA  E   +A  G+ ++ 
Sbjct: 68  SLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDLQ 127

Query: 132 WSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIF 166
           W    + YGKFC +M + +    L       V+ +SAF  FR++
Sbjct: 128 WMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

[Close]
BLAST of Cp4.1LG01g07980 vs. NCBI nr
Match: gi|659126871|ref|XP_008463406.1| (PREDICTED: CASP-like protein POPTRDRAFT_833824 [Cucumis melo])

HSP 1 Score: 243.4 bits (620), Expect = 3.0e-61
Identity = 127/173 (73.41%), Postives = 142/173 (82.08%), Query Frame = 1 

Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVS 60
           M ET+NP   + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+V 
Sbjct: 1   MAETNNPS--LFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQH 174
           SWSEA S+YGKFC  MKMAL+FQALGFGCFF++A++SAFRAF +F PPL S H
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISSH 171

[Close]
BLAST of Cp4.1LG01g07980 vs. NCBI nr
Match: gi|449463260|ref|XP_004149352.1| (PREDICTED: CASP-like protein 2D1 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 4.7e-59
Identity = 124/171 (72.51%), Postives = 139/171 (81.29%), Query Frame = 1 

Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVS 60
           M ET++P   + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+V 
Sbjct: 1   MTETNSPS--LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPS 172
           SWSEA S+YGKFC  MKMAL+FQALGF CFF +A++SAFRAF +F PPL S
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

[Close]
BLAST of Cp4.1LG01g07980 vs. NCBI nr
Match: gi|728849549|gb|KHG28992.1| (CASP-like protein [Gossypium arboreum])

HSP 1 Score: 208.8 bits (530), Expect = 8.1e-51
Identity = 110/170 (64.71%), Postives = 133/170 (78.24%), Query Frame = 1 

Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMV  S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTW 127

Query: 123 SEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQ 173
           SEA  +YGKFC KMK+AL+  AL   CF V+A++SA+R F  FDPP  S+
Sbjct: 128 SEACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSK 177

[Close]
BLAST of Cp4.1LG01g07980 vs. NCBI nr
Match: gi|922326183|ref|XP_013442484.1| (CASP POPTRDRAFT-like protein [Medicago truncatula])

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 101/159 (63.52%), Postives = 130/159 (81.76%), Query Frame = 1 

Query: 10  PILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSISAIAAAYA 69
           P+LKLLD SLRL SVPL++A+I +TVTN+QDN  YGTL++ ++SGLKYM+ +SA+ A YA
Sbjct: 17  PMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISGLKYMIFVSALCAGYA 76

Query: 70  LFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
           + AA  SW+R    KAW+FF+SDQ+VAYLMVTS+AA  EI YLAY G RE SWS+A S+Y
Sbjct: 77  IVAAVCSWVRYLMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAYNGAREDSWSQACSSY 136

Query: 130 GKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPP 169
           GKFC K+K+AL+   + FGCFFV+A++SAFRAF +FDPP
Sbjct: 137 GKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPP 175

[Close]
BLAST of Cp4.1LG01g07980 vs. NCBI nr
Match: gi|823222253|ref|XP_012443834.1| (PREDICTED: CASP-like protein 2D1 [Gossypium raimondii])

HSP 1 Score: 206.8 bits (525), Expect = 3.1e-50
Identity = 108/170 (63.53%), Postives = 134/170 (78.82%), Query Frame = 1 

Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVSIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL G+KYMV  S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++++W
Sbjct: 68  AICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITW 127

Query: 123 SEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQ 173
           SEA S+YGKFC +MK+AL+  AL   CF V+A++SA+R F  FDPP  S+
Sbjct: 128 SEACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPPFFSK 177

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g07980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CSPL3_VITVI9.5e-5261.76CASP-like protein 2D1 OS=Vitis vinifera GN=VIT_19s0090g00570 PE=2 SV=1[more]
CSPL4_SOYBN4.7e-5160.23CASP-like protein 2D1 OS=Glycine max PE=2 SV=1[more]
CSPLC_POPTR8.1e-5164.15CASP-like protein 2D1 OS=Populus trichocarpa GN=POPTRDRAFT_833824 PE=3 SV=1[more]
CSPL7_RICCO2.4e-4759.51CASP-like protein 2D1 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1[more]
CSPLX_ARATH1.4e-3950.61CASP-like protein 2D1 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1[more]
BLAST of Cp4.1LG01g07980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6A1_CUCSA3.3e-5972.51CASP-like protein OS=Cucumis sativus GN=Csa_3G076530 PE=3 SV=1[more]
A0A0B0PVY5_GOSAR5.6e-5164.71CASP-like protein OS=Gossypium arboreum GN=F383_12077 PE=3 SV=1[more]
I3S6M6_MEDTR9.6e-5163.52CASP-like protein OS=Medicago truncatula GN=MTR_0160s0040 PE=2 SV=1[more]
A0A0D2SI79_GOSRA2.1e-5063.53CASP-like protein OS=Gossypium raimondii GN=B456_009G440300 PE=3 SV=1[more]
A0A151QLU6_CAJCA1.4e-4963.19CASP-like protein OS=Cajanus cajan GN=KK1_048568 PE=3 SV=1[more]
BLAST of Cp4.1LG01g07980 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54980.18.0e-4150.61 Uncharacterised protein family (UPF0497)[more]
AT1G17200.16.0e-2030.63 Uncharacterised protein family (UPF0497)[more]
AT3G14380.16.2e-1731.45 Uncharacterised protein family (UPF0497)[more]
AT4G16442.12.8e-0926.22 Uncharacterised protein family (UPF0497)[more]
BLAST of Cp4.1LG01g07980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126871|ref|XP_008463406.1|3.0e-6173.41PREDICTED: CASP-like protein POPTRDRAFT_833824 [Cucumis melo][more]
gi|449463260|ref|XP_004149352.1|4.7e-5972.51PREDICTED: CASP-like protein 2D1 [Cucumis sativus][more]
gi|728849549|gb|KHG28992.1|8.1e-5164.71CASP-like protein [Gossypium arboreum][more]
gi|922326183|ref|XP_013442484.1|1.4e-5063.52CASP POPTRDRAFT-like protein [Medicago truncatula][more]
gi|823222253|ref|XP_012443834.1|3.1e-5063.53PREDICTED: CASP-like protein 2D1 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006702CASP_dom
IPR006459CASP/CASPL
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0003954 NADH dehydrogenase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07980.1Cp4.1LG01g07980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMsTIGR01569TIGR01569coord: 17..160
score: 2.2
IPR006702Domain of unknown function DUF588PFAMPF04535DUF588coord: 13..148
score: 9.7
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 10..177
score: 3.4
NoneNo IPR availablePANTHERPTHR11615:SF143SUBFAMILY NOT NAMEDcoord: 10..177
score: 3.4