CsGy3G005090 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G005090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	CASP-like protein
Location	Chr3 : 4045102 .. 4046958 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATGTTTTGTTTGTTTGTAAAAGAAAAATTAAGAAAAGGTTCCCTTCAATTTGAAGCTTCATCAAGCACAACACCAACACCACCACAAATTCATTCAACATAAATCCCAAACCAAACACAAACTCATCATTCCAATACATAAAAGATGATGAAAAGATAACCCCACTCATCCACTAATCCTCACTCCATAAAAGGGCAAACAAAACTTCTCAACTTTCATTTCACACTCTTCTTATTCATCTACATCCCCTTCTCCGCCAAACCCCATCAAAAGATTAGCTTCAAAAATGACAGAAACCAACAGTCCTTCACTCTTCAAATTTCTTGATTTCTCCTTAAGATTATGCTCTGTTCCTTTCAGCGTCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTAATTAATTATGAAATTTCATCAGATTTTCTCTTCATCTTCTTAATGGGGTTGTTTGTAATTTAGTAATTTCTTCTCTGTTTCAGGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCAGTTTCTTGCTTCCGGTGGTTCATCGTTAGGGCTTGGGTATTCTTCGTCTCCGATCAGGTTTGTGAATTTCCGTTTCAATTGAATTGTTATCTATCTCTTTCAATTTACTATTTTGGAAGAGTGGTTTCAAATGGTTAATTTAATTGGGATTTTTGATATCATATTGAAAGTATTTGCCGATTGTACGATTCTCACTGCAATTTAATGAATTTTGTTTCTTTTGTAAAAGAAAAAATTGGGAAAAAGGTAGAGACTGATATGGGGTGGCAGTCGTTCTTATACTCTCCAACTTTTTATTCTAAAAATTGAATACTAAAATTTTTAGAAATGTTAAAATTGAACCTCAAAGTTGCCAAAGGTACGATAGCATCAGTAACTTCATTTTCCCTTTTAGAAATGTGACAAAAAGTCATAATATTAACCAAATTCGTTCCCTCAAATTCATAACTTCTGACGTAGGATAGGATGCTTATTAGCTAGCCATTTATAGAATTTGTTTACTATCGTTATACATTATTAAATTCAATTTAAATTTAAGTCTAGTTTTAGAAATGATACTTGAGTGCATTCTACACATCTACGTCTTTGTTATGAACTTATGTTTGAATTTGATTTTGTTGGTAATGATTTAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCAGCGGTGGGGGAGATATTATACATAGCATACAATGGAGATAGAGAGGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTCTGTAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCCCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATAAACCGATTTAAACTATTCGTAATAAAATTCGGTGTAATCATGACGAGATTTCATCGCAAAGGTGACAAATTCCTAATTTTCATGGTGTGACATTAACAATAATATAATGATAACAAAGTTGATATGAATGGACTCGAGTTTCTTGTACTTGAGGGTCTTTTAATTATAAGACTATTGATGAATGTTTATTTCCTCTATAACTACTCTACAAATTTTACAATATATATCTTTTGGCTTAAATAAAATTTTACTTTGTCGGTTGGATTTGGATGTAACATGATGTGAAATTTTAAAATTAGTTTTACTTTTGAAAAACACATTTTATATTGGTTGGAAGAAAGTGAGTTTAATAATGTTATTGATGTGAAAAGAATAATAATGTAAAGTTTATT

mRNA sequence

CACATGTTTTGTTTGTTTGTAAAAGAAAAATTAAGAAAAGGTTCCCTTCAATTTGAAGCTTCATCAAGCACAACACCAACACCACCACAAATTCATTCAACATAAATCCCAAACCAAACACAAACTCATCATTCCAATACATAAAAGATGATGAAAAGATAACCCCACTCATCCACTAATCCTCACTCCATAAAAGGGCAAACAAAACTTCTCAACTTTCATTTCACACTCTTCTTATTCATCTACATCCCCTTCTCCGCCAAACCCCATCAAAAGATTAGCTTCAAAAATGACAGAAACCAACAGTCCTTCACTCTTCAAATTTCTTGATTTCTCCTTAAGATTATGCTCTGTTCCTTTCAGCGTCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCAGTTTCTTGCTTCCGGTGGTTCATCGTTAGGGCTTGGGTATTCTTCGTCTCCGATCAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCAGCGGTGGGGGAGATATTATACATAGCATACAATGGAGATAGAGAGGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTCTGTAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCCCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATAAACCGATTTAAACTATTCGTAATAAAATTCGGTGTAATCATGACGAGATTTCATCGCAAAGGTGACAAATTCCTAATTTTCATGGTGTGACATTAACAATAATATAATGATAACAAAGTTGATATGAATGGACTCGAGTTTCTTGTACTTGAGGGTCTTTTAATTATAAGACTATTGATGAATGTTTATTTCCTCTATAACTACTCTACAAATTTTACAATATATATCTTTTGGCTTAAATAAAATTTTACTTTGTCGGTTGGATTTGGATGTAACATGATGTGAAATTTTAAAATTAGTTTTACTTTTGAAAAACACATTTTATATTGGTTGGAAGAAAGTGAGTTTAATAATGTTATTGATGTGAAAAGAATAATAATGTAAAGTTTATT

Coding sequence (CDS)

ATGACAGAAACCAACAGTCCTTCACTCTTCAAATTTCTTGATTTCTCCTTAAGATTATGCTCTGTTCCTTTCAGCGTCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCAGTTTCTTGCTTCCGGTGGTTCATCGTTAGGGCTTGGGTATTCTTCGTCTCCGATCAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCAGCGGTGGGGGAGATATTATACATAGCATACAATGGAGATAGAGAGGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTCTGTAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCCCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATAA

Protein sequence

MTETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ

Homology

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BLAST of CsGy3G005090 vs. NCBI nr
Match: XP_004149352.1 (PREDICTED: CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical protein Csa_3G076530 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 2.1e-89
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MTETNSPSLFKFLDFSLRLCSVPF+VAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

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BLAST of CsGy3G005090 vs. NCBI nr
Match: XP_008463406.1 (PREDICTED: CASP-like protein 2D1 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 2.2e-86
Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           M ETN+PSLFKFLDFSLRLCSVPFS+AALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISS 171
           SEACSSYGKFCNNMKMALIFQALGF CFF LAIISAFRAFSVFPPPLISS
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISS 170

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BLAST of CsGy3G005090 vs. NCBI nr
Match: XP_022942434.1 (CASP-like protein 2D1 [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 2.7e-60
Identity = 125/171 (73.10%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 1   MTETNS--PSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET++  P + K LD SLRL SVP ++A++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

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BLAST of CsGy3G005090 vs. NCBI nr
Match: XP_023545873.1 (CASP-like protein 2D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 2.0e-58
Identity = 123/171 (71.93%), Postives = 139/171 (81.29%), Query Frame = 0


Query: 1   MTETNS--PSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET++  P + K LD SLRL SVP ++A++ LTVTNRQDNPDYG LEFHNLSGLKY+V 
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVS 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC  MKMAL+FQALGF CFF +A++SAFRAF +F PPL S
Sbjct: 121 SWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPS 171

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BLAST of CsGy3G005090 vs. NCBI nr
Match: XP_022984776.1 (CASP-like protein 2D1 [Cucurbita maxima])

HSP 1 Score: 216.9 bits (551), Expect = 5.5e-53
Identity = 113/168 (67.26%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 2   TETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61
           T  + P + K LD S                 TNRQDNPDYG LEFHNLSGLKY+VCISA
Sbjct: 4   THNSHPPILKLLDVSXXXXXXXXXXXXXXXXXTNRQDNPDYGTLEFHNLSGLKYMVCISA 63

Query: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121
           IAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREVSWS
Sbjct: 64  IAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWS 123

Query: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 170
           EA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 124 EAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

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BLAST of CsGy3G005090 vs. TAIR10
Match: AT5G54980.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 154.5 bits (389), Expect = 6.1e-38
Identity = 77/161 (47.83%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 6   SPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAV 65
           +P   K +D  LRL  VP SVA +WLTVTN + NPDYGNLE++++ GLKY+V +SAI+A+
Sbjct: 25  APMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAI 84

Query: 66  YAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACS 125
           YA L+   S     + +AW+FF+ DQ++AY+M  S A   EI+Y+   GD+ V+WSE CS
Sbjct: 85  YALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCS 144

Query: 126 SYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPP 167
           SY  +C+ + +AL         F  L++ISA+RAFS F PP
Sbjct: 145 SYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185

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BLAST of CsGy3G005090 vs. TAIR10
Match: AT1G17200.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-24
Identity = 59/155 (38.06%), Postives = 96/155 (61.94%), Query Frame = 0


Query: 17  LRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAAAVSCF 76
           LRL  V   VAAL + + + + N ++G++ + NL+  +YLV  + I A Y+ L+AA++  
Sbjct: 37  LRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLLSAAIAAM 96

Query: 77  ---RWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNN 136
                 + R W FF  DQ++ YL++A+GA   E+LY+AYNGD  ++WS+ACSSYG FC+ 
Sbjct: 97  PRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHR 156

Query: 137 MKMALIFQALGFACFFPLAIISAFRAFSVFPPPLI 169
              ++I        +  L++IS+++ F+ F PP I
Sbjct: 157 ATASVIITFFVVCFYIVLSLISSYKLFTRFDPPSI 190

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BLAST of CsGy3G005090 vs. TAIR10
Match: AT3G14380.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 88.6 bits (218), Expect = 4.1e-18
Identity = 50/154 (32.47%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 17  LRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAA----A 76
           LR+ S+  S+  L + + N   N ++G++ + N+    YLV  + + A Y+ L+A    A
Sbjct: 27  LRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLSALAILA 86

Query: 77  VSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCN 136
           + C     V+    F+ DQ+V Y+++A+GA   E +Y+AY G+  ++WS AC SYG FC+
Sbjct: 87  LPC-PISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSFCH 146

Query: 137 NMKMALIFQALGFACFFPLAIISAFRAFSVFPPP 167
           N  ++++F  +    +  L++IS++R F+ F  P
Sbjct: 147 NALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

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BLAST of CsGy3G005090 vs. TAIR10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 11  KFLDFSLRL------CSVP-FSVAALWLTVTNRQDNPDY---GNLEFHNLSGLKYLVCIS 70
           K +D  +RL      CS+  F++ AL L VT+ +    +      ++ ++  + +LV  +
Sbjct: 2   KLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVAN 61

Query: 71  AIAAVYAFLAA---AVSCFRWFIV----RAWVFFVSDQIVAYLMVASGAAVGEILYIAYN 130
            IAAVY+ L +    V   +  ++     AW FF  DQ +AYL VA+ AA  E   IA  
Sbjct: 62  GIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIARE 121

Query: 131 GDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVF 164
           G+ ++ W   C+ YGKFCN M + +    L       ++ ISAF  F ++
Sbjct: 122 GEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

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BLAST of CsGy3G005090 vs. TAIR10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 40.8 bits (94), Expect = 9.8e-04
Identity = 29/115 (25.22%), Postives = 55/115 (47.83%), Query Frame = 0


Query: 54  KYLVCISAIAAVYAFLAAAVSCFRWFI--------VRAWVFFVSDQIVAYLMVASGAAVG 113
           +Y+V   A   +Y+ L   +  +R            +AW+ F SDQ+  YLM+++G+A  
Sbjct: 71  QYVVGACAGTVLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQLFCYLMMSAGSAGS 130

Query: 114 EILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGF-----ACFFPLAIIS 156
            +  +   G R     + C +   FCN++ ++L+   L F     + FF + ++S
Sbjct: 131 GVTNLNKTGIRHTPLPDFCKTLSSFCNHVALSLLLVFLSFIFLASSSFFTVLVLS 185

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BLAST of CsGy3G005090 vs. Swiss-Prot
Match: sp|B9HTL5|CSPLC_POPTR (CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.9e-53
Identity = 104/163 (63.80%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           + K LDFSLRL  +P SVA +WLTVTN+QDN  YG L++ +L+GLKY+V IS I A YAF
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA  +  R  + + W+FFVSDQIVAYLMV SG AV EILY+AYNGDREVSWSEAC+SYG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           KFC  MK+A+I  AL  +CF  LA+ISA+RAFS+F PPL+ S+
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPLVPSK 163

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BLAST of CsGy3G005090 vs. Swiss-Prot
Match: sp|C6T2J5|CSPL4_SOYBN (CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.4e-52
Identity = 99/160 (61.88%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 12  FLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAA 71
           F D SLRLC++P SVA +W+TVTN++DN  YG L+++NLS LKY+V +SA+ A YA LAA
Sbjct: 21  FFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALCACYALLAA 80

Query: 72  AVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFC 131
           A S  R F+ +AW+FFVSDQIVAYL + S AAV E+ Y+AYNG +E SWSEACSSYG FC
Sbjct: 81  ACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEACSSYGSFC 140

Query: 132 NNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           + +K+ALI   + F CFF +A+ISAFRAFSVF PP ++SQ
Sbjct: 141 SKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQ 180

[Close]

BLAST of CsGy3G005090 vs. Swiss-Prot
Match: sp|A7P0P3|CSPL3_VITVI (CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-51
Identity = 103/171 (60.23%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           ++  + P+L K +D SLRLC +P SVA +WLTVTN+QDN  YG LEF NL+GLKY+VCIS
Sbjct: 10  ISSAHIPTL-KLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCIS 69

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
            I+A YA +A   S  R  + +AW+FFVSDQI+AYLMV SGAAV EILY+AY GDR VSW
Sbjct: 70  GISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSW 129

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYG+FC+ + +AL   AL   CF  LA+ISA+R FS+F PP+ S +
Sbjct: 130 SEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKE 179

[Close]

BLAST of CsGy3G005090 vs. Swiss-Prot
Match: sp|B9SV84|CSPL7_RICCO (CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49
Identity = 99/163 (60.74%), Postives = 122/163 (74.85%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           L K LD SLR+  +P S A +WLTVTN QDN  YGNL++ N+ GLKY+VCISAI A YAF
Sbjct: 4   LLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYAF 63

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA     +  + + W+FFVSDQI+AYLMV S AA  EILYIAYNGD++V+WSEAC+SYG
Sbjct: 64  VAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSYG 123

Query: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           KFCN MK ALI  AL    F  LA+ISA+RAFS++ PP+ S +
Sbjct: 124 KFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSKE 166

[Close]

BLAST of CsGy3G005090 vs. Swiss-Prot
Match: sp|Q9FFT2|CSPLX_ARATH (CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 77/161 (47.83%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 6   SPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAV 65
           +P   K +D  LRL  VP SVA +WLTVTN + NPDYGNLE++++ GLKY+V +SAI+A+
Sbjct: 25  APMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAI 84

Query: 66  YAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACS 125
           YA L+   S     + +AW+FF+ DQ++AY+M  S A   EI+Y+   GD+ V+WSE CS
Sbjct: 85  YALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCS 144

Query: 126 SYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPP 167
           SY  +C+ + +AL         F  L++ISA+RAFS F PP
Sbjct: 145 SYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185

[Close]

BLAST of CsGy3G005090 vs. TrEMBL
Match: tr|A0A0A0L6A1|A0A0A0L6A1_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.4e-89
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MTETNSPSLFKFLDFSLRLCSVPF+VAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

[Close]

BLAST of CsGy3G005090 vs. TrEMBL
Match: tr|A0A1S3CJM6|A0A1S3CJM6_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86
Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           M ETN+PSLFKFLDFSLRLCSVPFS+AALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISS 171
           SEACSSYGKFCNNMKMALIFQALGF CFF LAIISAFRAFSVFPPPLISS
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISS 170

[Close]

BLAST of CsGy3G005090 vs. TrEMBL
Match: tr|A0A2N9HS39|A0A2N9HS39_FAGSY (CASP-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42353 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.8e-53
Identity = 108/163 (66.26%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           + KFLD SLR+C +P S AA+WLTVTN+QDN  YG LEF NL GLKYLVCISAI A YAF
Sbjct: 19  MLKFLDCSLRVCVIPLSAAAIWLTVTNQQDNSTYGKLEFSNLIGLKYLVCISAICAGYAF 78

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA  S  R  + +AW+FFV+DQI AYLMV S AAV EILY+AYNGDRE++WSE CSSYG
Sbjct: 79  IAAISSWIRCLVKKAWLFFVTDQICAYLMVTSMAAVLEILYLAYNGDREITWSEECSSYG 138

Query: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           KFCN MK+A +F AL   CF  LA+ISA+RAFS+F PP + S+
Sbjct: 139 KFCNKMKLAFVFHALALCCFIVLAVISAYRAFSMFEPPTLPSK 181

[Close]

BLAST of CsGy3G005090 vs. TrEMBL
Match: tr|A0A0B0PVY5|A0A0B0PVY5_GOSAR (CASP-like protein OS=Gossypium arboreum OX=29729 GN=F383_12077 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.0e-52
Identity = 107/170 (62.94%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 2   TETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61
           + T +P + K LD SLR+  +P SVA +WLTVTN+QDN  YG+++F+NL GLKY+VC SA
Sbjct: 10  SNTQNP-ILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTSA 69

Query: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121
           I A YA  AA  S  R+F+ +AW+FFVSDQIVAYLMV SGAAV EILY+AYNGD++V+WS
Sbjct: 70  ICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTWS 129

Query: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           EAC SYGKFCN MK+ALI  AL   CF  LA+ISA+R FS F PP  S Q
Sbjct: 130 EACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSKQ 178

[Close]

BLAST of CsGy3G005090 vs. TrEMBL
Match: tr|A0A0D2SI79|A0A0D2SI79_GOSRA (CASP-like protein OS=Gossypium raimondii OX=29730 GN=B456_009G440300 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.3e-52
Identity = 106/170 (62.35%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 2   TETNSPSLFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61
           + T +P + K LD SLR+  +P SVA +WLTVTN+QDN  YG+++F+NL G+KY+VC SA
Sbjct: 10  SNTQNP-ILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTSA 69

Query: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121
           I A YA  AA  S  R+F+ +AW+FFVSDQIVAYLMV SGAAV EILY+AYNGD++++WS
Sbjct: 70  ICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITWS 129

Query: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           EACSSYGKFCN MK+ALI  AL   CF  LA+ISA+R FS F PP  S Q
Sbjct: 130 EACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPPFFSKQ 178

The following BLAST results are available for this feature:

BLAST of CsGy3G005090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149352.1	2.1e-89	99.42	PREDICTED: CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical prot...	[more]
XP_008463406.1	2.2e-86	97.06	PREDICTED: CASP-like protein 2D1 [Cucumis melo]	[more]
XP_022942434.1	2.7e-60	73.10	CASP-like protein 2D1 [Cucurbita moschata]	[more]
XP_023545873.1	2.0e-58	71.93	CASP-like protein 2D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022984776.1	5.5e-53	67.26	CASP-like protein 2D1 [Cucurbita maxima]	[more]

BLAST of CsGy3G005090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54980.1	6.1e-38	47.83	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	5.0e-24	38.06	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	4.1e-18	32.47	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	2.2e-11	31.18	Uncharacterised protein family (UPF0497)	[more]
AT1G79780.1	9.8e-04	25.22	Uncharacterised protein family (UPF0497)	[more]

BLAST of CsGy3G005090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9HTL5\|CSPLC_POPTR	4.9e-53	63.80	CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 S...	[more]
sp\|C6T2J5\|CSPL4_SOYBN	5.4e-52	61.88	CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|A7P0P3\|CSPL3_VITVI	1.6e-51	60.23	CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1	[more]
sp\|B9SV84\|CSPL7_RICCO	2.5e-49	60.74	CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1	[more]
sp\|Q9FFT2\|CSPLX_ARATH	1.1e-36	47.83	CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1	[more]

BLAST of CsGy3G005090 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6A1\|A0A0A0L6A1_CUCSA	1.4e-89	99.42	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1	[more]
tr\|A0A1S3CJM6\|A0A1S3CJM6_CUCME	1.5e-86	97.06	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1	[more]
tr\|A0A2N9HS39\|A0A2N9HS39_FAGSY	2.8e-53	66.26	CASP-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42353 PE=3 SV=1	[more]
tr\|A0A0B0PVY5\|A0A0B0PVY5_GOSAR	4.0e-52	62.94	CASP-like protein OS=Gossypium arboreum OX=29729 GN=F383_12077 PE=3 SV=1	[more]
tr\|A0A0D2SI79\|A0A0D2SI79_GOSRA	5.3e-52	62.35	CASP-like protein OS=Gossypium raimondii OX=29730 GN=B456_009G440300 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0003954	NADH dehydrogenase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G005090.1	CsGy3G005090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 11..147 e-value: 9.3E-33 score: 113.0
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 16..158 e-value: 1.0E-21 score: 75.4
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 4..170
None	No IPR available	PANTHER	PTHR11615:SF143	CASP-LIKE PROTEIN 2D1	coord: 4..170

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G005090	Cla005320	Watermelon (97103) v1	cgybwmB183
CsGy3G005090	Csa3G076530	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G005090	MELO3C025364	Melon (DHL92) v3.5.1	cgybmeB201
CsGy3G005090	ClCG10G005310	Watermelon (Charleston Gray)	cgybwcgB174
CsGy3G005090	CSPI03G05020	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G005090	CmaCh04G009620	Cucurbita maxima (Rimu)	cgybcmaB416
CsGy3G005090	CmoCh04G010380	Cucurbita moschata (Rifu)	cgybcmoB393
CsGy3G005090	Lsi05G005840	Bottle gourd (USVL1VR-Ls)	cgyblsiB183
CsGy3G005090	Cp4.1LG01g07980	Cucurbita pepo (Zucchini)	cgybcpeB369
CsGy3G005090	MELO3C025364.2	Melon (DHL92) v3.6.1	cgybmedB205
CsGy3G005090	CsaV3_3G005020	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G005090	Cla97C10G189550	Watermelon (97103) v2	cgybwmbB174
CsGy3G005090	Bhi11G000466	Wax gourd	cgybwgoB209
CsGy3G005090	Carg00078	Silver-seed gourd	carcgybB0659

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G005090	Cucurbita pepo (Zucchini)	cgybcpeB320
CsGy3G005090	Cucurbita pepo (Zucchini)	cgybcpeB326
CsGy3G005090	Watermelon (Charleston Gray)	cgybwcgB198