CmoCh04G010380 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G010380
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CASP-like protein
Location	Cmo_Chr04 : 5180353 .. 5181519 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAACAAATTTGAAGGCAAACAACCCGAAGCCATCATTTCCAGCACAGAAAAAGAGCAAAGAAAAGCAGAGCCCACACCCACTAATCCATCCATTCTCACTCCAAAAAGGGGCAAAGAAGTTGGGAGCAAATTTCTCGCCTTTCACACTTCTTTACTCTTCTTCTTATTTCCCCAAATCCCTCAATCAGACCTGTTCTTCACTCCATCGCTTCACCCAATCAAAAAATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTAACTAAATATATATTTACATCAAATTTCTTCATCTGGGTCTGCTCCAAATTTAAATCCGGTAATGGGTTTTGATTCATTGTCAGGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGGTTTATACAATTCCGTCCATTCCCATTTCAATTTATTTATGTAATTGAATTTGTTGTGTGATGGGTGGTTCAGATTGTGGCTTATTTGATGGTGACATCGGTAGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTATGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGACAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAGATTTTGCTTCTACTTCAAATTCTGAGATTTGTAATGCCTTTGCCAATTACTTTTATGTTTGTTGTATCAAATAAGAAAGTGCAAAAGTGTTTGATTTTCATTTGCATACTGGTGAGCAACATAATGGCATCACTCAAATTATTGGTTAGATTTCATTGGTGAAAGTAAAAGCCTTCTAAAAATGATAAGGTAAGGAGGGTTCATCGGTTCTAGTTATTCAAATTTTTGTTTTTAATAAAAC

mRNA sequence

ATCAACAAATTTGAAGGCAAACAACCCGAAGCCATCATTTCCAGCACAGAAAAAGAGCAAAGAAAAGCAGAGCCCACACCCACTAATCCATCCATTCTCACTCCAAAAAGGGGCAAAGAAGTTGGGAGCAAATTTCTCGCCTTTCACACTTCTTTACTCTTCTTCTTATTTCCCCAAATCCCTCAATCAGACCTGTTCTTCACTCCATCGCTTCACCCAATCAAAAAATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTAGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTATGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGACAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAGATTTTGCTTCTACTTCAAATTCTGAGATTTGTAATGCCTTTGCCAATTACTTTTATGTTTGTTGTATCAAATAAGAAAGTGCAAAAGTGTTTGATTTTCATTTGCATACTGGTGAGCAACATAATGGCATCACTCAAATTATTGGTTAGATTTCATTGGTGAAAGTAAAAGCCTTCTAAAAATGATAAGGTAAGGAGGGTTCATCGGTTCTAGTTATTCAAATTTTTGTTTTTAATAAAAC

Coding sequence (CDS)

ATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTAGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTATGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGACAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAG

Homology

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BLAST of CmoCh04G010380 vs. Swiss-Prot
Match: CSPL3_VITVI (CASP-like protein 2D1 OS=Vitis vinifera GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-53
Identity = 107/170 (62.94%), Postives = 133/170 (78.24%), Query Frame = 1


Query: 8   HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAA 67
           H P LKL+D SLRL  +PL++A+I LTVTN+QDN  YG LEF NL+GLKYMVCIS I+A 
Sbjct: 14  HIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCISGISAG 73

Query: 68  YALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYS 127
           YAL A   SW+RC   KAW+FFVSDQI+AYLMVTS AAV EILYLAY GDR VSWSEA S
Sbjct: 74  YALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACS 133

Query: 128 TYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQ 178
           +YG+FC ++ +AL   AL   CF V+AV+SA+R FS+F+PP+ S+ ++ +
Sbjct: 134 SYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEVEEE 183

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BLAST of CmoCh04G010380 vs. Swiss-Prot
Match: CSPL4_SOYBN (CASP-like protein 2D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.5e-52
Identity = 104/171 (60.82%), Postives = 135/171 (78.95%), Query Frame = 1


Query: 6   NPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIA 65
           N H P+L   D SLRL ++PL++A++ +TVTN++DN  YG L+++NLS LKYMV +SA+ 
Sbjct: 13  NHHLPMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALC 72

Query: 66  AAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A YAL AAA S +RCF +KAW+FFVSDQIVAYL +TSVAAV E+ YLAY G +E SWSEA
Sbjct: 73  ACYALLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEA 132

Query: 126 YSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP-LPSQHLQ 176
            S+YG FC K+K+AL+   + F CFFV+AV+SAFRAFS+FDPP + SQ +Q
Sbjct: 133 CSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQEVQ 183

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BLAST of CmoCh04G010380 vs. Swiss-Prot
Match: CSPLC_POPTR (CASP-like protein 2D1 OS=Populus trichocarpa GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-51
Identity = 103/159 (64.78%), Postives = 128/159 (80.50%), Query Frame = 1


Query: 11  ILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYAL 70
           +LKLLD SLRL  +PL++A+I LTVTN+QDN  YG L++ +L+GLKYMV IS I A+YA 
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 71  FAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTYG 130
            AA  +W+RC   K W+FFVSDQIVAYLMVTS  AV EILYLAY GDREVSWSEA ++YG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 131 KFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPL 170
           KFC +MK+A++  AL   CF ++AV+SA+RAFSIF+PPL
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPL 159

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BLAST of CmoCh04G010380 vs. Swiss-Prot
Match: CSPL7_RICCO (CASP-like protein 2D1 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.4e-49
Identity = 99/163 (60.74%), Postives = 127/163 (77.91%), Query Frame = 1


Query: 10  PILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYA 69
           P+LKLLD SLR+  +PL+ A+I LTVTN QDN  YG L++ N+ GLKYMVCISAI A+YA
Sbjct: 3   PLLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYA 62

Query: 70  LFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
             AA   W++C   K W+FFVSDQI+AYLMVTSVAA  EILY+AY GD++V+WSEA ++Y
Sbjct: 63  FVAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSY 122

Query: 130 GKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           GKFC+ MK AL+  AL    F V+AV+SA+RAFS++ PP+ S+
Sbjct: 123 GKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSK 165

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BLAST of CmoCh04G010380 vs. Swiss-Prot
Match: CSPLX_ARATH (CASP-like protein 2D1 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.4e-40
Identity = 84/164 (51.22%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 9   PPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           Y  +C K+ +AL         F  ++V+SA+RAFS FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

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BLAST of CmoCh04G010380 vs. TrEMBL
Match: A0A0A0L6A1_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.6e-61
Identity = 126/171 (73.68%), Postives = 142/171 (83.04%), Query Frame = 1


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET++P   + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MTETNSPS--LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

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BLAST of CmoCh04G010380 vs. TrEMBL
Match: A0A0B0PVY5_GOSAR (CASP-like protein OS=Gossypium arboreum GN=F383_12077 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.8e-53
Identity = 112/170 (65.88%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           SEA  +YGKFC+KMK+AL+  AL   CF V+A++SA+R FS FDPP  S+
Sbjct: 128 SEACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSK 177

[Close]

BLAST of CmoCh04G010380 vs. TrEMBL
Match: A0A0D2SI79_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_009G440300 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-52
Identity = 110/170 (64.71%), Postives = 137/170 (80.59%), Query Frame = 1


Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL G+KYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++++W
Sbjct: 68  AICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           SEA S+YGKFC++MK+AL+  AL   CF V+A++SA+R FS FDPP  S+
Sbjct: 128 SEACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPPFFSK 177

[Close]

BLAST of CmoCh04G010380 vs. TrEMBL
Match: I3S6M6_MEDTR (CASP-like protein OS=Medicago truncatula GN=MTR_0160s0040 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.5e-51
Identity = 102/159 (64.15%), Postives = 131/159 (82.39%), Query Frame = 1


Query: 10  PILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYA 69
           P+LKLLD SLRL SVPL++A+I +TVTN+QDN  YGTL++ ++SGLKYM+ +SA+ A YA
Sbjct: 17  PMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISGLKYMIFVSALCAGYA 76

Query: 70  LFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
           + AA  SW+R    KAW+FF+SDQ+VAYLMVTS+AA  EI YLAY G RE SWS+A S+Y
Sbjct: 77  IVAAVCSWVRYLMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAYNGAREDSWSQACSSY 136

Query: 130 GKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           GKFC K+K+AL+   + FGCFFV+A++SAFRAFS+FDPP
Sbjct: 137 GKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPP 175

[Close]

BLAST of CmoCh04G010380 vs. TrEMBL
Match: V4UN00_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10009601mg PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.3e-51
Identity = 105/168 (62.50%), Postives = 132/168 (78.57%), Query Frame = 1


Query: 10  PILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYA 69
           P+LKL+D  LR+ ++PL+IA+I LTVTN++DN DYG L+F NL+GLKYMVCIS I A YA
Sbjct: 19  PMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYA 78

Query: 70  LFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
             AA  SWLR    KAW+FF+SDQIVAYLMVTS AAV EILYLAY GD++V+WSE  STY
Sbjct: 79  FIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTY 138

Query: 130 GKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQ 178
           GKFC ++K+A V  A+  GCF ++AV+SAFR FS+FDPP  S + + +
Sbjct: 139 GKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEE 186

[Close]

BLAST of CmoCh04G010380 vs. TAIR10
Match: AT5G54980.1 (AT5G54980.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 164.9 bits (416), Expect = 4.7e-41
Identity = 84/164 (51.22%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 9   PPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           Y  +C K+ +AL         F  ++V+SA+RAFS FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

[Close]

BLAST of CmoCh04G010380 vs. TAIR10
Match: AT1G17200.1 (AT1G17200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 94.4 bits (233), Expect = 7.8e-20
Identity = 49/160 (30.63%), Postives = 98/160 (61.25%), Query Frame = 1


Query: 12  LKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALF 71
           ++  +  LRL  V L +A++ + + + + N ++G++ + NL+  +Y+V  + I A Y+L 
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLL 89

Query: 72  AAAFSWLRCFAA---KAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 131
           +AA + +   ++   + W FF  DQ++ YL++ + A   E+LYLAY GD  ++WS+A S+
Sbjct: 90  SAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSS 149

Query: 132 YGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           YG FC +   +++        + V++++S+++ F+ FDPP
Sbjct: 150 YGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPP 188

[Close]

BLAST of CmoCh04G010380 vs. TAIR10
Match: AT3G14380.1 (AT3G14380.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16
Identity = 49/159 (30.82%), Postives = 93/159 (58.49%), Query Frame = 1


Query: 13  KLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALFA 72
           K  +  LR+ S+ L+I  + + + N   N ++G++ + N+    Y+V  + + AAY+L +
Sbjct: 21  KSAEAVLRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLS 80

Query: 73  A-AFSWLRCFAAKAWV--FFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 132
           A A   L C  +K  V   F+ DQ+V Y+++ + A   E +YLAYYG+  ++WS A  +Y
Sbjct: 81  ALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSY 140

Query: 133 GKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           G FC    +++VF  +    + +++++S++R F+ F+ P
Sbjct: 141 GSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

[Close]

BLAST of CmoCh04G010380 vs. TAIR10
Match: AT4G16442.1 (AT4G16442.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 57.8 bits (138), Expect = 8.1e-09
Identity = 42/164 (25.61%), Postives = 79/164 (48.17%), Query Frame = 1


Query: 12  LKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYG---TLEFHNLSGLKYMVCISAIAAAY 71
           ++L ++ LR       + ++ L VT+ +    +    T ++ ++  + ++V  + IAA Y
Sbjct: 8   MRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVY 67

Query: 72  ALFAAAFSWLRCFAAK-------AWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVS 131
           +L  +    +     K       AW FF  DQ +AYL V ++AA  E   +A  G+ ++ 
Sbjct: 68  SLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDLQ 127

Query: 132 WSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIF 166
           W    + YGKFC++M + +    L       V+ +SAF  F ++
Sbjct: 128 WMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

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BLAST of CmoCh04G010380 vs. NCBI nr
Match: gi|659126871|ref|XP_008463406.1| (PREDICTED: CASP-like protein POPTRDRAFT_833824 [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 4.1e-63
Identity = 129/173 (74.57%), Postives = 145/173 (83.82%), Query Frame = 1


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET+NP   + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MAETNNPS--LFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQH 174
           SWSEA S+YGKFC+ MKMAL+FQALGFGCFF++A++SAFRAFS+F PPL S H
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISSH 171

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BLAST of CmoCh04G010380 vs. NCBI nr
Match: gi|449463260|ref|XP_004149352.1| (PREDICTED: CASP-like protein 2D1 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 6.6e-61
Identity = 126/171 (73.68%), Postives = 142/171 (83.04%), Query Frame = 1


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET++P   + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MTETNSPS--LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

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BLAST of CmoCh04G010380 vs. NCBI nr
Match: gi|728849549|gb|KHG28992.1| (CASP-like protein [Gossypium arboreum])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 112/170 (65.88%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           SEA  +YGKFC+KMK+AL+  AL   CF V+A++SA+R FS FDPP  S+
Sbjct: 128 SEACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSK 177

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BLAST of CmoCh04G010380 vs. NCBI nr
Match: gi|823222253|ref|XP_012443834.1| (PREDICTED: CASP-like protein 2D1 [Gossypium raimondii])

HSP 1 Score: 213.0 bits (541), Expect = 4.3e-52
Identity = 110/170 (64.71%), Postives = 137/170 (80.59%), Query Frame = 1


Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL G+KYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++++W
Sbjct: 68  AICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           SEA S+YGKFC++MK+AL+  AL   CF V+A++SA+R FS FDPP  S+
Sbjct: 128 SEACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPPFFSK 177

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BLAST of CmoCh04G010380 vs. NCBI nr
Match: gi|225460947|ref|XP_002279766.1| (PREDICTED: CASP-like protein 2D1 [Vitis vinifera])

HSP 1 Score: 210.3 bits (534), Expect = 2.8e-51
Identity = 107/170 (62.94%), Postives = 133/170 (78.24%), Query Frame = 1


Query: 8   HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAA 67
           H P LKL+D SLRL  +PL++A+I LTVTN+QDN  YG LEF NL+GLKYMVCIS I+A 
Sbjct: 14  HIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCISGISAG 73

Query: 68  YALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYS 127
           YAL A   SW+RC   KAW+FFVSDQI+AYLMVTS AAV EILYLAY GDR VSWSEA S
Sbjct: 74  YALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACS 133

Query: 128 TYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQ 178
           +YG+FC ++ +AL   AL   CF V+AV+SA+R FS+F+PP+ S+ ++ +
Sbjct: 134 SYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEVEEE 183

The following BLAST results are available for this feature:

BLAST of CmoCh04G010380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPL3_VITVI	1.7e-53	62.94	CASP-like protein 2D1 OS=Vitis vinifera GN=VIT_19s0090g00570 PE=2 SV=1	[more]
CSPL4_SOYBN	9.5e-52	60.82	CASP-like protein 2D1 OS=Glycine max PE=2 SV=1	[more]
CSPLC_POPTR	2.8e-51	64.78	CASP-like protein 2D1 OS=Populus trichocarpa GN=POPTRDRAFT_833824 PE=3 SV=1	[more]
CSPL7_RICCO	3.4e-49	60.74	CASP-like protein 2D1 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1	[more]
CSPLX_ARATH	8.4e-40	51.22	CASP-like protein 2D1 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1	[more]

BLAST of CmoCh04G010380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A1_CUCSA	4.6e-61	73.68	CASP-like protein OS=Cucumis sativus GN=Csa_3G076530 PE=3 SV=1	[more]
A0A0B0PVY5_GOSAR	7.8e-53	65.88	CASP-like protein OS=Gossypium arboreum GN=F383_12077 PE=3 SV=1	[more]
A0A0D2SI79_GOSRA	3.0e-52	64.71	CASP-like protein OS=Gossypium raimondii GN=B456_009G440300 PE=3 SV=1	[more]
I3S6M6_MEDTR	2.5e-51	64.15	CASP-like protein OS=Medicago truncatula GN=MTR_0160s0040 PE=2 SV=1	[more]
V4UN00_9ROSI	4.3e-51	62.50	CASP-like protein OS=Citrus clementina GN=CICLE_v10009601mg PE=3 SV=1	[more]

BLAST of CmoCh04G010380 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54980.1	4.7e-41	51.22	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	7.8e-20	30.63	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	1.8e-16	30.82	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	8.1e-09	25.61	Uncharacterised protein family (UPF0497)	[more]

BLAST of CmoCh04G010380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126871\|ref\|XP_008463406.1\|	4.1e-63	74.57	PREDICTED: CASP-like protein POPTRDRAFT_833824 [Cucumis melo]	[more]
gi\|449463260\|ref\|XP_004149352.1\|	6.6e-61	73.68	PREDICTED: CASP-like protein 2D1 [Cucumis sativus]	[more]
gi\|728849549\|gb\|KHG28992.1\|	1.1e-52	65.88	CASP-like protein [Gossypium arboreum]	[more]
gi\|823222253\|ref\|XP_012443834.1\|	4.3e-52	64.71	PREDICTED: CASP-like protein 2D1 [Gossypium raimondii]	[more]
gi\|225460947\|ref\|XP_002279766.1\|	2.8e-51	62.94	PREDICTED: CASP-like protein 2D1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0003954	NADH dehydrogenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G010380.1	CmoCh04G010380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAMs	TIGR01569	TIGR01569	coord: 17..160 score: 3.3
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 13..148 score: 9.5
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 10..177 score: 6.4
None	No IPR available	PANTHER	PTHR11615:SF143	SUBFAMILY NOT NAMED	coord: 10..177 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G010380	Cucsa.060070	Cucumber (Gy14) v1	cgycmoB0076
CmoCh04G010380	CmaCh04G009620	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G010380	Cla005320	Watermelon (97103) v1	cmowmB653
CmoCh04G010380	Csa3G076530	Cucumber (Chinese Long) v2	cmocuB693
CmoCh04G010380	MELO3C025364	Melon (DHL92) v3.5.1	cmomeB684
CmoCh04G010380	ClCG10G005310	Watermelon (Charleston Gray)	cmowcgB615
CmoCh04G010380	CSPI03G05020	Wild cucumber (PI 183967)	cmocpiB703
CmoCh04G010380	Lsi05G005840	Bottle gourd (USVL1VR-Ls)	cmolsiB684
CmoCh04G010380	Cp4.1LG01g07980	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G010380	MELO3C025364.2	Melon (DHL92) v3.6.1	cmomedB776
CmoCh04G010380	CsaV3_3G005020	Cucumber (Chinese Long) v3	cmocucB0822
CmoCh04G010380	Cla97C10G189550	Watermelon (97103) v2	cmowmbB689
CmoCh04G010380	Bhi11G000466	Wax gourd	cmowgoB0817
CmoCh04G010380	CsGy3G005090	Cucumber (Gy14) v2	cgybcmoB393
CmoCh04G010380	Carg00078	Silver-seed gourd	carcmoB0923

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G010380	Cucurbita moschata (Rifu)	cmocmoB285