CsaV3_3G005020 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G005020
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	CASP-like protein
Location	chr3 : 4185706 .. 4187480 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCACATGTTTTGTTTGTTTCCAAAAGAAAAATTAAGAAAAGGTTCCCTTCAATTTGAAGCTTCATCAAGCACAACACCAACACCACCACAAATTCATTCAACATAAATCCCAAACCAAACACAAACTCATCATTCCAATACATAAAAGATGATGAAAAGATAACCCCACTCATCCACTAATCCTCACTCCATAAAAGGGCAAACAAAACTTCTCAACTTTCATTTCACACTCTTCTTATTCATCTACATCCCCTTCTCCGCCAAACCCCATCAAAAGATTAGCTTCAGAAATGACAGAAACCAACAGTCCTTCACTCTTCAAATTTCTTGATTTCTCCTTAAGATTATGCTCTGTTCCTTTCACCGTCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTAATTAATTATGAAATTTCATCAGATTTTCTCTTCATCTTCTTAATGGGGTTGTTTGTAATTTAGTAATTTCTTCTCTGTTTCAGGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCAGTTTCTTGCTTCCGGTGGTTCATCGTTAGGGCTTGGGTATTCTTCGTCTCCGATCAGGTTTGTGAATTTCCGTTTCAATTGAATTGTTATCTATCTCTTTCAATTTACTATTTTGGAAGAGTGGTTTCAAATGGTTAATTTAATTGGGATTTTTGATATCATATTGAAAGTATTTGCCGATTGTACGATTCTCACTGCAATTTAATGAATTTTGTTTCTTTTGTAAAAGAAAAAATTGGGAAAAAGGTAGAGACTGATATGGGGTGGCAGTCGTTCTTATACTCTCCAACTTTTTATTCTAAAAATTGAATACTAAAATTTTTAGAAATGTTAAAATTGAACCTCAAAGTTGCCAAAGGTACGATAGCATCAGTAACTTCATTTTCCCTTTTAGAAATGTGACAAAAAGTCATAATATTAACCAAATTCGTTCCCTCAAATTCATAACTTCTGACGTAGGATAGGATGCTTATTAGCTAGCCATTTATAGAATTTGTTTACTATCGTTATACATTATTAAATTCAATTTAAATTTAAGTCTAGTTTTAGAAATGATACTTGAGTGCATTCTACACATCTACGTCTTTGTTATGAACTTATGTTTGAATTTGATTTTGTTGGTAATGATTTAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCAGCGGTGGGGGAGATATTATACATAGCATACAATGGAGATAGAGAGGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTCTGTAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCCCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATAAACCGATTTAAACTATTCGTAATAAAATTCGGTGTAATCATGACGAGATTTCATCGCAAAGGTGACAAATTCCTAATTTTCATGGTGTGACATTAACAATAATATAATGATAACAAAGTTGATATGAATGGACTCGAGTTTCTTGTACTTGAGGGTCTTTTAATTATAAGACTATTGATGAATGTTTATTTCCTCTATAACTACTCTACAAATTTTACAATATATATCTTTTGGCTTAAATAAAATTTTACTTTGTCGGTTGGATTTGGATGTAACATGATGTGAAATTTTAAAATTAGTTTTAC

mRNA sequence

ATGACAGAAACCAACAGTCCTTCACTCTTCAAATTTCTTGATTTCTCCTTAAGATTATGCTCTGTTCCTTTCACCGTCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCAGTTTCTTGCTTCCGGTGGTTCATCGTTAGGGCTTGGGTATTCTTCGTCTCCGATCAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCAGCGGTGGGGGAGATATTATACATAGCATACAATGGAGATAGAGAGGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTCTGTAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCCCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATAA

Coding sequence (CDS)

ATGACAGAAACCAACAGTCCTTCACTCTTCAAATTTCTTGATTTCTCCTTAAGATTATGCTCTGTTCCTTTCACCGTCGCTGCTCTGTGGCTCACTGTCACCAACCGACAAGACAATCCAGATTATGGCAACTTAGAGTTTCATAATCTCAGTGGTCTCAAGTACTTGGTTTGCATATCTGCCATCGCCGCCGTCTATGCTTTTCTCGCCGCCGCAGTTTCTTGCTTCCGGTGGTTCATCGTTAGGGCTTGGGTATTCTTCGTCTCCGATCAGATTGTGGCTTATTTGATGGTTGCATCGGGCGCAGCGGTGGGGGAGATATTATACATAGCATACAATGGAGATAGAGAGGTTTCATGGAGTGAAGCTTGTAGTTCATATGGCAAATTCTGTAACAACATGAAAATGGCTCTCATTTTTCAAGCTTTAGGATTTGCTTGCTTCTTTCCCTTGGCTATCATCTCTGCTTTTAGGGCTTTTAGTGTCTTCCCCCCTCCCCTAATCTCTTCCCAATAA

Protein sequence

MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ

Homology

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BLAST of CsaV3_3G005020 vs. NCBI nr
Match: XP_004149352.1 (PREDICTED: CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical protein Csa_3G076530 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 3.3e-90
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

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BLAST of CsaV3_3G005020 vs. NCBI nr
Match: XP_008463406.1 (PREDICTED: CASP-like protein 2D1 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 2.2e-86
Identity = 164/170 (96.47%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           M ETN+PSLFKFLDFSLRLCSVPF++AALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISS 171
           SEACSSYGKFCNNMKMALIFQALGF CFF LAIISAFRAFSVFPPPLISS
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISS 170

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BLAST of CsaV3_3G005020 vs. NCBI nr
Match: XP_022942434.1 (CASP-like protein 2D1 [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 5.5e-61
Identity = 126/171 (73.68%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 1   MTETNS--PSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET++  P + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

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BLAST of CsaV3_3G005020 vs. NCBI nr
Match: XP_023545873.1 (CASP-like protein 2D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 4.0e-59
Identity = 124/171 (72.51%), Postives = 139/171 (81.29%), Query Frame = 0


Query: 1   MTETNS--PSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60
           M ET++  P + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+V 
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVS 60

Query: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 170
           SWSEA S+YGKFC  MKMAL+FQALGF CFF +A++SAFRAF +F PPL S
Sbjct: 121 SWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPS 171

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BLAST of CsaV3_3G005020 vs. NCBI nr
Match: XP_022984776.1 (CASP-like protein 2D1 [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53
Identity = 113/168 (67.26%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 2   TETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61
           T  + P + K LD S                 TNRQDNPDYG LEFHNLSGLKY+VCISA
Sbjct: 4   THNSHPPILKLLDVSXXXXXXXXXXXXXXXXXTNRQDNPDYGTLEFHNLSGLKYMVCISA 63

Query: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121
           IAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREVSWS
Sbjct: 64  IAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWS 123

Query: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 170
           EA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 124 EAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 171

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BLAST of CsaV3_3G005020 vs. TAIR10
Match: AT5G54980.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 154.1 bits (388), Expect = 8.0e-38
Identity = 76/161 (47.20%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 6   SPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAV 65
           +P   K +D  LRL  VP +VA +WLTVTN + NPDYGNLE++++ GLKY+V +SAI+A+
Sbjct: 25  APMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAI 84

Query: 66  YAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACS 125
           YA L+   S     + +AW+FF+ DQ++AY+M  S A   EI+Y+   GD+ V+WSE CS
Sbjct: 85  YALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCS 144

Query: 126 SYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPP 167
           SY  +C+ + +AL         F  L++ISA+RAFS F PP
Sbjct: 145 SYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185

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BLAST of CsaV3_3G005020 vs. TAIR10
Match: AT1G17200.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 109.0 bits (271), Expect = 2.9e-24
Identity = 59/155 (38.06%), Postives = 96/155 (61.94%), Query Frame = 0


Query: 17  LRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAAAVSCF 76
           LRL  V   VAAL + + + + N ++G++ + NL+  +YLV  + I A Y+ L+AA++  
Sbjct: 37  LRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLLSAAIAAM 96

Query: 77  ---RWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNN 136
                 + R W FF  DQ++ YL++A+GA   E+LY+AYNGD  ++WS+ACSSYG FC+ 
Sbjct: 97  PRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHR 156

Query: 137 MKMALIFQALGFACFFPLAIISAFRAFSVFPPPLI 169
              ++I        +  L++IS+++ F+ F PP I
Sbjct: 157 ATASVIITFFVVCFYIVLSLISSYKLFTRFDPPSI 190

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BLAST of CsaV3_3G005020 vs. TAIR10
Match: AT3G14380.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 88.2 bits (217), Expect = 5.4e-18
Identity = 49/154 (31.82%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 17  LRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAA----A 76
           LR+ S+  ++  L + + N   N ++G++ + N+    YLV  + + A Y+ L+A    A
Sbjct: 27  LRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLSALAILA 86

Query: 77  VSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCN 136
           + C     V+    F+ DQ+V Y+++A+GA   E +Y+AY G+  ++WS AC SYG FC+
Sbjct: 87  LPC-PISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSFCH 146

Query: 137 NMKMALIFQALGFACFFPLAIISAFRAFSVFPPP 167
           N  ++++F  +    +  L++IS++R F+ F  P
Sbjct: 147 NALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

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BLAST of CsaV3_3G005020 vs. TAIR10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 11  KFLDFSLRL------CSVP-FTVAALWLTVTNRQDNPDY---GNLEFHNLSGLKYLVCIS 70
           K +D  +RL      CS+  F + AL L VT+ +    +      ++ ++  + +LV  +
Sbjct: 2   KLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVAN 61

Query: 71  AIAAVYAFLAA---AVSCFRWFIV----RAWVFFVSDQIVAYLMVASGAAVGEILYIAYN 130
            IAAVY+ L +    V   +  ++     AW FF  DQ +AYL VA+ AA  E   IA  
Sbjct: 62  GIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIARE 121

Query: 131 GDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVF 164
           G+ ++ W   C+ YGKFCN M + +    L       ++ ISAF  F ++
Sbjct: 122 GEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

[Close]

BLAST of CsaV3_3G005020 vs. TAIR10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 40.8 bits (94), Expect = 9.9e-04
Identity = 29/115 (25.22%), Postives = 55/115 (47.83%), Query Frame = 0


Query: 54  KYLVCISAIAAVYAFLAAAVSCFRWFI--------VRAWVFFVSDQIVAYLMVASGAAVG 113
           +Y+V   A   +Y+ L   +  +R            +AW+ F SDQ+  YLM+++G+A  
Sbjct: 71  QYVVGACAGTVLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQLFCYLMMSAGSAGS 130

Query: 114 EILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGF-----ACFFPLAIIS 156
            +  +   G R     + C +   FCN++ ++L+   L F     + FF + ++S
Sbjct: 131 GVTNLNKTGIRHTPLPDFCKTLSSFCNHVALSLLLVFLSFIFLASSSFFTVLVLS 185

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BLAST of CsaV3_3G005020 vs. Swiss-Prot
Match: sp|B9HTL5|CSPLC_POPTR (CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.4e-53
Identity = 103/163 (63.19%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           + K LDFSLRL  +P +VA +WLTVTN+QDN  YG L++ +L+GLKY+V IS I A YAF
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA  +  R  + + W+FFVSDQIVAYLMV SG AV EILY+AYNGDREVSWSEAC+SYG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           KFC  MK+A+I  AL  +CF  LA+ISA+RAFS+F PPL+ S+
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPLVPSK 163

[Close]

BLAST of CsaV3_3G005020 vs. Swiss-Prot
Match: sp|C6T2J5|CSPL4_SOYBN (CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.1e-52
Identity = 98/160 (61.25%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 12  FLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAFLAA 71
           F D SLRLC++P +VA +W+TVTN++DN  YG L+++NLS LKY+V +SA+ A YA LAA
Sbjct: 21  FFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALCACYALLAA 80

Query: 72  AVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFC 131
           A S  R F+ +AW+FFVSDQIVAYL + S AAV E+ Y+AYNG +E SWSEACSSYG FC
Sbjct: 81  ACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEACSSYGSFC 140

Query: 132 NNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           + +K+ALI   + F CFF +A+ISAFRAFSVF PP ++SQ
Sbjct: 141 SKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQ 180

[Close]

BLAST of CsaV3_3G005020 vs. Swiss-Prot
Match: sp|A7P0P3|CSPL3_VITVI (CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51
Identity = 102/171 (59.65%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           ++  + P+L K +D SLRLC +P +VA +WLTVTN+QDN  YG LEF NL+GLKY+VCIS
Sbjct: 10  ISSAHIPTL-KLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCIS 69

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
            I+A YA +A   S  R  + +AW+FFVSDQI+AYLMV SGAAV EILY+AY GDR VSW
Sbjct: 70  GISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSW 129

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYG+FC+ + +AL   AL   CF  LA+ISA+R FS+F PP+ S +
Sbjct: 130 SEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKE 179

[Close]

BLAST of CsaV3_3G005020 vs. Swiss-Prot
Match: sp|B9SV84|CSPL7_RICCO (CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-49
Identity = 98/163 (60.12%), Postives = 122/163 (74.85%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           L K LD SLR+  +P + A +WLTVTN QDN  YGNL++ N+ GLKY+VCISAI A YAF
Sbjct: 4   LLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYAF 63

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA     +  + + W+FFVSDQI+AYLMV S AA  EILYIAYNGD++V+WSEAC+SYG
Sbjct: 64  VAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSYG 123

Query: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           KFCN MK ALI  AL    F  LA+ISA+RAFS++ PP+ S +
Sbjct: 124 KFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSKE 166

[Close]

BLAST of CsaV3_3G005020 vs. Swiss-Prot
Match: sp|Q9FFT2|CSPLX_ARATH (CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-36
Identity = 76/161 (47.20%), Postives = 108/161 (67.08%), Query Frame = 0


Query: 6   SPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAV 65
           +P   K +D  LRL  VP +VA +WLTVTN + NPDYGNLE++++ GLKY+V +SAI+A+
Sbjct: 25  APMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAI 84

Query: 66  YAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACS 125
           YA L+   S     + +AW+FF+ DQ++AY+M  S A   EI+Y+   GD+ V+WSE CS
Sbjct: 85  YALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCS 144

Query: 126 SYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPP 167
           SY  +C+ + +AL         F  L++ISA+RAFS F PP
Sbjct: 145 SYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185

[Close]

BLAST of CsaV3_3G005020 vs. TrEMBL
Match: tr|A0A0A0L6A1|A0A0A0L6A1_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.2e-90
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

[Close]

BLAST of CsaV3_3G005020 vs. TrEMBL
Match: tr|A0A1S3CJM6|A0A1S3CJM6_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86
Identity = 164/170 (96.47%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MTETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60
           M ETN+PSLFKFLDFSLRLCSVPF++AALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS
Sbjct: 1   MAETNNPSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCIS 60

Query: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120
           AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW
Sbjct: 61  AIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSW 120

Query: 121 SEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISS 171
           SEACSSYGKFCNNMKMALIFQALGF CFF LAIISAFRAFSVFPPPLISS
Sbjct: 121 SEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISS 170

[Close]

BLAST of CsaV3_3G005020 vs. TrEMBL
Match: tr|A0A2N9HS39|A0A2N9HS39_FAGSY (CASP-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42353 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.7e-53
Identity = 107/163 (65.64%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 9   LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68
           + KFLD SLR+C +P + AA+WLTVTN+QDN  YG LEF NL GLKYLVCISAI A YAF
Sbjct: 19  MLKFLDCSLRVCVIPLSAAAIWLTVTNQQDNSTYGKLEFSNLIGLKYLVCISAICAGYAF 78

Query: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128
           +AA  S  R  + +AW+FFV+DQI AYLMV S AAV EILY+AYNGDRE++WSE CSSYG
Sbjct: 79  IAAISSWIRCLVKKAWLFFVTDQICAYLMVTSMAAVLEILYLAYNGDREITWSEECSSYG 138

Query: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           KFCN MK+A +F AL   CF  LA+ISA+RAFS+F PP + S+
Sbjct: 139 KFCNKMKLAFVFHALALCCFIVLAVISAYRAFSMFEPPTLPSK 181

[Close]

BLAST of CsaV3_3G005020 vs. TrEMBL
Match: tr|A0A0B0PVY5|A0A0B0PVY5_GOSAR (CASP-like protein OS=Gossypium arboreum OX=29729 GN=F383_12077 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.3e-52
Identity = 106/170 (62.35%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 2   TETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61
           + T +P + K LD SLR+  +P +VA +WLTVTN+QDN  YG+++F+NL GLKY+VC SA
Sbjct: 10  SNTQNP-ILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTSA 69

Query: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121
           I A YA  AA  S  R+F+ +AW+FFVSDQIVAYLMV SGAAV EILY+AYNGD++V+WS
Sbjct: 70  ICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTWS 129

Query: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           EAC SYGKFCN MK+ALI  AL   CF  LA+ISA+R FS F PP  S Q
Sbjct: 130 EACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSKQ 178

[Close]

BLAST of CsaV3_3G005020 vs. TrEMBL
Match: tr|A0A0D2SI79|A0A0D2SI79_GOSRA (CASP-like protein OS=Gossypium raimondii OX=29730 GN=B456_009G440300 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.9e-52
Identity = 105/170 (61.76%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 2   TETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61
           + T +P + K LD SLR+  +P +VA +WLTVTN+QDN  YG+++F+NL G+KY+VC SA
Sbjct: 10  SNTQNP-ILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTSA 69

Query: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121
           I A YA  AA  S  R+F+ +AW+FFVSDQIVAYLMV SGAAV EILY+AYNGD++++WS
Sbjct: 70  ICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITWS 129

Query: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 172
           EACSSYGKFCN MK+ALI  AL   CF  LA+ISA+R FS F PP  S Q
Sbjct: 130 EACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPPFFSKQ 178

The following BLAST results are available for this feature:

BLAST of CsaV3_3G005020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149352.1	3.3e-90	100.00	PREDICTED: CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical prot...	[more]
XP_008463406.1	2.2e-86	96.47	PREDICTED: CASP-like protein 2D1 [Cucumis melo]	[more]
XP_022942434.1	5.5e-61	73.68	CASP-like protein 2D1 [Cucurbita moschata]	[more]
XP_023545873.1	4.0e-59	72.51	CASP-like protein 2D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022984776.1	3.2e-53	67.26	CASP-like protein 2D1 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G005020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54980.1	8.0e-38	47.20	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	2.9e-24	38.06	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	5.4e-18	31.82	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	2.2e-11	31.18	Uncharacterised protein family (UPF0497)	[more]
AT1G79780.1	9.9e-04	25.22	Uncharacterised protein family (UPF0497)	[more]

BLAST of CsaV3_3G005020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9HTL5\|CSPLC_POPTR	6.4e-53	63.19	CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 S...	[more]
sp\|C6T2J5\|CSPL4_SOYBN	7.1e-52	61.25	CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|A7P0P3\|CSPL3_VITVI	2.1e-51	59.65	CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1	[more]
sp\|B9SV84\|CSPL7_RICCO	3.3e-49	60.12	CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1	[more]
sp\|Q9FFT2\|CSPLX_ARATH	1.4e-36	47.20	CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1	[more]

BLAST of CsaV3_3G005020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6A1\|A0A0A0L6A1_CUCSA	2.2e-90	100.00	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1	[more]
tr\|A0A1S3CJM6\|A0A1S3CJM6_CUCME	1.5e-86	96.47	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1	[more]
tr\|A0A2N9HS39\|A0A2N9HS39_FAGSY	3.7e-53	65.64	CASP-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42353 PE=3 SV=1	[more]
tr\|A0A0B0PVY5\|A0A0B0PVY5_GOSAR	5.3e-52	62.35	CASP-like protein OS=Gossypium arboreum OX=29729 GN=F383_12077 PE=3 SV=1	[more]
tr\|A0A0D2SI79\|A0A0D2SI79_GOSRA	6.9e-52	61.76	CASP-like protein OS=Gossypium raimondii OX=29730 GN=B456_009G440300 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0003954	NADH dehydrogenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G005020.1	CsaV3_3G005020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 11..147 e-value: 7.5E-33 score: 113.3
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 16..158 e-value: 2.1E-22 score: 77.6
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 4..170
None	No IPR available	PANTHER	PTHR11615:SF143	CASP-LIKE PROTEIN 2D1	coord: 4..170

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G005020	CSPI03G05020	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G005020	Cucsa.060070	Cucumber (Gy14) v1	cgycucB046
CsaV3_3G005020	CmaCh04G009620	Cucurbita maxima (Rimu)	cmacucB0837
CsaV3_3G005020	CmoCh04G010380	Cucurbita moschata (Rifu)	cmocucB0822
CsaV3_3G005020	Cp4.1LG01g07980	Cucurbita pepo (Zucchini)	cpecucB0491
CsaV3_3G005020	CsGy3G005090	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G005020	Carg00078	Silver-seed gourd	carcucB0698
CsaV3_3G005020	Cla005320	Watermelon (97103) v1	cucwmB204
CsaV3_3G005020	MELO3C025364	Melon (DHL92) v3.5.1	cucmeB237
CsaV3_3G005020	ClCG10G005310	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G005020	Lsi05G005840	Bottle gourd (USVL1VR-Ls)	cuclsiB217
CsaV3_3G005020	MELO3C025364.2	Melon (DHL92) v3.6.1	cucmedB234
CsaV3_3G005020	Cla97C10G189550	Watermelon (97103) v2	cucwmbB182
CsaV3_3G005020	Bhi11G000466	Wax gourd	cucwgoB223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G005020	Silver-seed gourd	carcucB0943
CsaV3_3G005020	Cucurbita maxima (Rimu)	cmacucB0026
CsaV3_3G005020	Cucurbita moschata (Rifu)	cmocucB0014
CsaV3_3G005020	Cucurbita pepo (Zucchini)	cpecucB0250
CsaV3_3G005020	Cucurbita pepo (Zucchini)	cpecucB0256
CsaV3_3G005020	Cucurbita pepo (Zucchini)	cpecucB0968
CsaV3_3G005020	Watermelon (Charleston Gray)	cucwcgB219