CmaCh04G009620 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G009620
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CASP-like protein
Location	Cma_Chr04 : 4937653 .. 4938773 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGGTTCTCTGTTCTTGACTTGAAGTTGAAGGCTTATCAACAAATTTGAAGGCAGACACAACCCGAAGCCATCATTTCCAGCACAGAAAAAGAGCGAAGAAAAGCAGAGCCCACACCCACTAATCCATCCATTCTCACTCCAAAAAGGGGCAAAGAAGTTGGGACCAAATTTCTCGCCCTTCACACTTCTCTACTCTTTTTCTTATTTCCCCAAATCCCTCAAACAGAGCTGTTCTTCACTCGATCATCGCTTCACCAAATCAAAAATGGAAGAAACCCACAATTCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCCTCTCCGTTCCTCTCACCATCGCTTCAATCGGCCTCACCGTCACCAACCGCCAGGACAATCCCGATTACGGCACCTTGGAGTTTCACAATCTCAGCGGCCTCAAGTAACTAAATAATCTCTTTACATCAAATTTCTTCCTCTGGGTCTGCTCCAAATTAAATTCGGAAATGGGTTTTGATTCATTCTCAGGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGATCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGGTTTATACAATTCCGTCCATTCCCATTTCAATTTATTTGTGTAATTGAATTTGTTTTGTGATGGGTGGTTCAGATTGTGGCTTATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTACGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGACAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCATCACCTTCAACACCAAAGCAATTAGATTTTGCATATTTCCTTTGCTTTTACTTCAAACTGTTGCCATTAACTTTTATGTTTGGTGTATCAAATAAGTAAAGTGTAAAACTGGTTGCTTTTCAATTGCATAATGGTGAAGAACATAATGGCATCACTCAAATTCTTGAGATCAATGGCAT

mRNA sequence

GGTTGGTTCTCTGTTCTTGACTTGAAGTTGAAGGCTTATCAACAAATTTGAAGGCAGACACAACCCGAAGCCATCATTTCCAGCACAGAAAAAGAGCGAAGAAAAGCAGAGCCCACACCCACTAATCCATCCATTCTCACTCCAAAAAGGGGCAAAGAAGTTGGGACCAAATTTCTCGCCCTTCACACTTCTCTACTCTTTTTCTTATTTCCCCAAATCCCTCAAACAGAGCTGTTCTTCACTCGATCATCGCTTCACCAAATCAAAAATGGAAGAAACCCACAATTCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCCTCTCCGTTCCTCTCACCATCGCTTCAATCGGCCTCACCGTCACCAACCGCCAGGACAATCCCGATTACGGCACCTTGGAGTTTCACAATCTCAGCGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGATCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTACGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGACAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCATCACCTTCAACACCAAAGCAATTAGATTTTGCATATTTCCTTTGCTTTTACTTCAAACTGTTGCCATTAACTTTTATGTTTGGTGTATCAAATAAGTAAAGTGTAAAACTGGTTGCTTTTCAATTGCATAATGGTGAAGAACATAATGGCATCACTCAAATTCTTGAGATCAATGGCAT

Coding sequence (CDS)

ATGGAAGAAACCCACAATTCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCCTCTCCGTTCCTCTCACCATCGCTTCAATCGGCCTCACCGTCACCAACCGCCAGGACAATCCCGATTACGGCACCTTGGAGTTTCACAATCTCAGCGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGATCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTGGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTACGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGACAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCATCACCTTCAACACCAAAGCAATTAG

Protein sequence

MEETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSHHLQHQSN

Homology

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BLAST of CmaCh04G009620 vs. Swiss-Prot
Match: CSPL3_VITVI (CASP-like protein 2D1 OS=Vitis vinifera GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-53
Identity = 107/172 (62.21%), Postives = 134/172 (77.91%), Query Frame = 1


Query: 6   NSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIA 65
           ++H P LKL+D SLRL  +PL++A+I LTVTN+QDN  YG LEF NL+GLKYMVCIS I+
Sbjct: 12  SAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCISGIS 71

Query: 66  AAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A YAL A   SW+RC   KAW+FFVSDQI+AYLMVTS AAV EILYLAY GDR VSWSEA
Sbjct: 72  AGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEA 131

Query: 126 YSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSHHLQHQ 178
            S+YG+FC ++ +AL   AL   CF V+AV+SA+R FS+F+PP+ S  ++ +
Sbjct: 132 CSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEVEEE 183

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BLAST of CmaCh04G009620 vs. Swiss-Prot
Match: CSPL4_SOYBN (CASP-like protein 2D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.3e-52
Identity = 101/163 (61.96%), Postives = 130/163 (79.75%), Query Frame = 1


Query: 6   NSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIA 65
           N H P+L   D SLRL ++PL++A++ +TVTN++DN  YG L+++NLS LKYMV +SA+ 
Sbjct: 13  NHHLPMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALC 72

Query: 66  AAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A YAL AAA S +RCF +KAW+FFVSDQIVAYL +TSVAAV E+ YLAY G +E SWSEA
Sbjct: 73  ACYALLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEA 132

Query: 126 YSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
            S+YG FC K+K+AL+   + F CFFV+AV+SAFRAFS+FDPP
Sbjct: 133 CSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPP 175

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BLAST of CmaCh04G009620 vs. Swiss-Prot
Match: CSPLC_POPTR (CASP-like protein 2D1 OS=Populus trichocarpa GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51
Identity = 104/159 (65.41%), Postives = 128/159 (80.50%), Query Frame = 1


Query: 11  ILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYAL 70
           +LKLLD SLRL  +PL++A+I LTVTN+QDN  YG L++ +L+GLKYMV IS I A+YA 
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 71  FAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTYG 130
            AA  +WIRC   K W+FFVSDQIVAYLMVTS  AV EILYLAY GDREVSWSEA ++YG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 131 KFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPL 170
           KFC +MK+A++  AL   CF ++AV+SA+RAFSIF+PPL
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPL 159

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BLAST of CmaCh04G009620 vs. Swiss-Prot
Match: CSPL7_RICCO (CASP-like protein 2D1 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.4e-49
Identity = 100/162 (61.73%), Postives = 126/162 (77.78%), Query Frame = 1


Query: 10  PILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYA 69
           P+LKLLD SLR+  +PL+ A+I LTVTN QDN  YG L++ N+ GLKYMVCISAI A+YA
Sbjct: 3   PLLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYA 62

Query: 70  LFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
             AA   WI+C   K W+FFVSDQI+AYLMVTSVAA  EILY+AY GD++V+WSEA ++Y
Sbjct: 63  FVAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSY 122

Query: 130 GKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           GKFC+ MK AL+  AL    F V+AV+SA+RAFS++ PP+ S
Sbjct: 123 GKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSS 164

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BLAST of CmaCh04G009620 vs. Swiss-Prot
Match: CSPLX_ARATH (CASP-like protein 2D1 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-39
Identity = 83/163 (50.92%), Postives = 114/163 (69.94%), Query Frame = 1


Query: 9   PPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           Y  +C K+ +AL         F  ++V+SA+RAFS FDPP  S
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDS 188

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BLAST of CmaCh04G009620 vs. TrEMBL
Match: A0A0A0L6A1_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.5e-61
Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 4   THNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISA 63
           T  + P + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+VCISA
Sbjct: 2   TETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61

Query: 64  IAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWS 123
           IAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREVSWS
Sbjct: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121

Query: 124 EAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           EA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

[Close]

BLAST of CmaCh04G009620 vs. TrEMBL
Match: A0A0B0PVY5_GOSAR (CASP-like protein OS=Gossypium arboreum GN=F383_12077 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.6e-53
Identity = 112/166 (67.47%), Postives = 135/166 (81.33%), Query Frame = 1


Query: 3   ETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N+  PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SWIR F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           SEA  +YGKFC+KMK+AL+  AL   CF V+A++SA+R FS FDPP
Sbjct: 128 SEACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPP 173

[Close]

BLAST of CmaCh04G009620 vs. TrEMBL
Match: A0A0D2SI79_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_009G440300 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-52
Identity = 110/166 (66.27%), Postives = 136/166 (81.93%), Query Frame = 1


Query: 3   ETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N+  PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL G+KYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SWIR F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++++W
Sbjct: 68  AICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           SEA S+YGKFC++MK+AL+  AL   CF V+A++SA+R FS FDPP
Sbjct: 128 SEACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPP 173

[Close]

BLAST of CmaCh04G009620 vs. TrEMBL
Match: I3S6M6_MEDTR (CASP-like protein OS=Medicago truncatula GN=MTR_0160s0040 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-51
Identity = 102/159 (64.15%), Postives = 131/159 (82.39%), Query Frame = 1


Query: 10  PILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYA 69
           P+LKLLD SLRL SVPL++A+I +TVTN+QDN  YGTL++ ++SGLKYM+ +SA+ A YA
Sbjct: 17  PMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISGLKYMIFVSALCAGYA 76

Query: 70  LFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
           + AA  SW+R    KAW+FF+SDQ+VAYLMVTS+AA  EI YLAY G RE SWS+A S+Y
Sbjct: 77  IVAAVCSWVRYLMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAYNGAREDSWSQACSSY 136

Query: 130 GKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           GKFC K+K+AL+   + FGCFFV+A++SAFRAFS+FDPP
Sbjct: 137 GKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPP 175

[Close]

BLAST of CmaCh04G009620 vs. TrEMBL
Match: A0A151QLU6_CAJCA (CASP-like protein OS=Cajanus cajan GN=KK1_048568 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.6e-51
Identity = 104/163 (63.80%), Postives = 132/163 (80.98%), Query Frame = 1


Query: 6   NSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIA 65
           N H  +LKL D SLRL +VPL++A+I +TVTN+QDN  YG L+++NLSGLKYMV +SA+ 
Sbjct: 13  NQHLLMLKLFDSSLRLCAVPLSVATIWITVTNQQDNSSYGMLKYNNLSGLKYMVLVSALC 72

Query: 66  AAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A+YAL AAA SW+R F +KAW+FFVSDQIVAYL +TSVAAV EI YLAY G +E SWS+A
Sbjct: 73  ASYALVAAACSWVRYFVSKAWIFFVSDQIVAYLTITSVAAVMEIYYLAYNGAKEDSWSQA 132

Query: 126 YSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
            S+YG+FC K+K+ L+   + F CFF +AV+SAFRAFS+FDPP
Sbjct: 133 CSSYGRFCSKVKLVLILHVITFFCFFFLAVISAFRAFSVFDPP 175

[Close]

BLAST of CmaCh04G009620 vs. TAIR10
Match: AT5G54980.1 (AT5G54980.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-40
Identity = 83/163 (50.92%), Postives = 114/163 (69.94%), Query Frame = 1


Query: 9   PPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           Y  +C K+ +AL         F  ++V+SA+RAFS FDPP  S
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDS 188

[Close]

BLAST of CmaCh04G009620 vs. TAIR10
Match: AT1G17200.1 (AT1G17200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-19
Identity = 49/160 (30.63%), Postives = 98/160 (61.25%), Query Frame = 1


Query: 12  LKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALF 71
           ++  +  LRL  V L +A++ + + + + N ++G++ + NL+  +Y+V  + I A Y+L 
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLL 89

Query: 72  AAAFSWIRCFAA---KAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 131
           +AA + +   ++   + W FF  DQ++ YL++ + A   E+LYLAY GD  ++WS+A S+
Sbjct: 90  SAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSS 149

Query: 132 YGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           YG FC +   +++        + V++++S+++ F+ FDPP
Sbjct: 150 YGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPP 188

[Close]

BLAST of CmaCh04G009620 vs. TAIR10
Match: AT3G14380.1 (AT3G14380.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 81.6 bits (200), Expect = 5.2e-16
Identity = 48/159 (30.19%), Postives = 93/159 (58.49%), Query Frame = 1


Query: 13  KLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALFA 72
           K  +  LR+ S+ L+I  + + + N   N ++G++ + N+    Y+V  + + AAY+L +
Sbjct: 21  KSAEAVLRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLS 80

Query: 73  A-AFSWIRCFAAKAWV--FFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 132
           A A   + C  +K  V   F+ DQ+V Y+++ + A   E +YLAYYG+  ++WS A  +Y
Sbjct: 81  ALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSY 140

Query: 133 GKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           G FC    +++VF  +    + +++++S++R F+ F+ P
Sbjct: 141 GSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

[Close]

BLAST of CmaCh04G009620 vs. TAIR10
Match: AT4G16442.1 (AT4G16442.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08
Identity = 45/171 (26.32%), Postives = 82/171 (47.95%), Query Frame = 1


Query: 12  LKLLDVSLRLLSVPL-------TIASIGLTVTNRQDNPDYG---TLEFHNLSGLKYMVCI 71
           +KL+D  +RL  + L        + ++ L VT+ +    +    T ++ ++  + ++V  
Sbjct: 1   MKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVA 60

Query: 72  SAIAAAYALFAAAFSWIRCFAAK-------AWVFFVSDQIVAYLMVTSVAAVGEILYLAY 131
           + IAA Y+L  +    +     K       AW FF  DQ +AYL V ++AA  E   +A 
Sbjct: 61  NGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAR 120

Query: 132 YGDREVSWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIF 166
            G+ ++ W    + YGKFC++M + +    L       V+ +SAF  F ++
Sbjct: 121 EGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

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BLAST of CmaCh04G009620 vs. NCBI nr
Match: gi|659126871|ref|XP_008463406.1| (PREDICTED: CASP-like protein POPTRDRAFT_833824 [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 9.2e-63
Identity = 129/173 (74.57%), Postives = 145/173 (83.82%), Query Frame = 1


Query: 1   MEETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET+N  P + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MAETNN--PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSHH 174
           SWSEA S+YGKFC+ MKMAL+FQALGFGCFF++A++SAFRAFS+F PPL S H
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISSH 171

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BLAST of CmaCh04G009620 vs. NCBI nr
Match: gi|449463260|ref|XP_004149352.1| (PREDICTED: CASP-like protein 2D1 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 5.0e-61
Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 4   THNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISA 63
           T  + P + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+VCISA
Sbjct: 2   TETNSPSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISA 61

Query: 64  IAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWS 123
           IAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREVSWS
Sbjct: 62  IAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWS 121

Query: 124 EAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           EA S+YGKFC+ MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 122 EACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

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BLAST of CmaCh04G009620 vs. NCBI nr
Match: gi|728849549|gb|KHG28992.1| (CASP-like protein [Gossypium arboreum])

HSP 1 Score: 215.7 bits (548), Expect = 6.6e-53
Identity = 112/166 (67.47%), Postives = 135/166 (81.33%), Query Frame = 1


Query: 3   ETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N+  PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SWIR F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           SEA  +YGKFC+KMK+AL+  AL   CF V+A++SA+R FS FDPP
Sbjct: 128 SEACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPP 173

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BLAST of CmaCh04G009620 vs. NCBI nr
Match: gi|823222253|ref|XP_012443834.1| (PREDICTED: CASP-like protein 2D1 [Gossypium raimondii])

HSP 1 Score: 213.8 bits (543), Expect = 2.5e-52
Identity = 110/166 (66.27%), Postives = 136/166 (81.93%), Query Frame = 1


Query: 3   ETHNSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N+  PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL G+KYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGVKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SWIR F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++++W
Sbjct: 68  AICAAYALFAAVASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKITW 127

Query: 123 SEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           SEA S+YGKFC++MK+AL+  AL   CF V+A++SA+R FS FDPP
Sbjct: 128 SEACSSYGKFCNQMKVALILHALVLCCFIVLALISAYRVFSKFDPP 173

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BLAST of CmaCh04G009620 vs. NCBI nr
Match: gi|225460947|ref|XP_002279766.1| (PREDICTED: CASP-like protein 2D1 [Vitis vinifera])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 107/172 (62.21%), Postives = 134/172 (77.91%), Query Frame = 1


Query: 6   NSHPPILKLLDVSLRLLSVPLTIASIGLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIA 65
           ++H P LKL+D SLRL  +PL++A+I LTVTN+QDN  YG LEF NL+GLKYMVCIS I+
Sbjct: 12  SAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCISGIS 71

Query: 66  AAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A YAL A   SW+RC   KAW+FFVSDQI+AYLMVTS AAV EILYLAY GDR VSWSEA
Sbjct: 72  AGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEA 131

Query: 126 YSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSHHLQHQ 178
            S+YG+FC ++ +AL   AL   CF V+AV+SA+R FS+F+PP+ S  ++ +
Sbjct: 132 CSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEVEEE 183

The following BLAST results are available for this feature:

BLAST of CmaCh04G009620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPL3_VITVI	1.0e-53	62.21	CASP-like protein 2D1 OS=Vitis vinifera GN=VIT_19s0090g00570 PE=2 SV=1	[more]
CSPL4_SOYBN	7.3e-52	61.96	CASP-like protein 2D1 OS=Glycine max PE=2 SV=1	[more]
CSPLC_POPTR	2.1e-51	65.41	CASP-like protein 2D1 OS=Populus trichocarpa GN=POPTRDRAFT_833824 PE=3 SV=1	[more]
CSPL7_RICCO	3.4e-49	61.73	CASP-like protein 2D1 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1	[more]
CSPLX_ARATH	2.4e-39	50.92	CASP-like protein 2D1 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1	[more]

BLAST of CmaCh04G009620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A1_CUCSA	3.5e-61	73.81	CASP-like protein OS=Cucumis sativus GN=Csa_3G076530 PE=3 SV=1	[more]
A0A0B0PVY5_GOSAR	4.6e-53	67.47	CASP-like protein OS=Gossypium arboreum GN=F383_12077 PE=3 SV=1	[more]
A0A0D2SI79_GOSRA	1.7e-52	66.27	CASP-like protein OS=Gossypium raimondii GN=B456_009G440300 PE=3 SV=1	[more]
I3S6M6_MEDTR	1.5e-51	64.15	CASP-like protein OS=Medicago truncatula GN=MTR_0160s0040 PE=2 SV=1	[more]
A0A151QLU6_CAJCA	9.6e-51	63.80	CASP-like protein OS=Cajanus cajan GN=KK1_048568 PE=3 SV=1	[more]

BLAST of CmaCh04G009620 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54980.1	1.4e-40	50.92	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	2.3e-19	30.63	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	5.2e-16	30.19	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	1.4e-08	26.32	Uncharacterised protein family (UPF0497)	[more]

BLAST of CmaCh04G009620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126871\|ref\|XP_008463406.1\|	9.2e-63	74.57	PREDICTED: CASP-like protein POPTRDRAFT_833824 [Cucumis melo]	[more]
gi\|449463260\|ref\|XP_004149352.1\|	5.0e-61	73.81	PREDICTED: CASP-like protein 2D1 [Cucumis sativus]	[more]
gi\|728849549\|gb\|KHG28992.1\|	6.6e-53	67.47	CASP-like protein [Gossypium arboreum]	[more]
gi\|823222253\|ref\|XP_012443834.1\|	2.5e-52	66.27	PREDICTED: CASP-like protein 2D1 [Gossypium raimondii]	[more]
gi\|225460947\|ref\|XP_002279766.1\|	1.6e-51	62.21	PREDICTED: CASP-like protein 2D1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0003954	NADH dehydrogenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G009620.1	CmaCh04G009620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAMs	TIGR01569	TIGR01569	coord: 17..160 score: 2.2
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 13..148 score: 1.6
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 6..177 score: 4.8
None	No IPR available	PANTHER	PTHR11615:SF143	SUBFAMILY NOT NAMED	coord: 6..177 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G009620	Cucsa.060070	Cucumber (Gy14) v1	cgycmaB0081
CmaCh04G009620	Cla005320	Watermelon (97103) v1	cmawmB659
CmaCh04G009620	Csa3G076530	Cucumber (Chinese Long) v2	cmacuB702
CmaCh04G009620	MELO3C025364	Melon (DHL92) v3.5.1	cmameB693
CmaCh04G009620	ClCG10G005310	Watermelon (Charleston Gray)	cmawcgB614
CmaCh04G009620	CSPI03G05020	Wild cucumber (PI 183967)	cmacpiB710
CmaCh04G009620	CmoCh04G010380	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G009620	Lsi05G005840	Bottle gourd (USVL1VR-Ls)	cmalsiB691
CmaCh04G009620	Cp4.1LG01g07980	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G009620	MELO3C025364.2	Melon (DHL92) v3.6.1	cmamedB780
CmaCh04G009620	CsaV3_3G005020	Cucumber (Chinese Long) v3	cmacucB0837
CmaCh04G009620	Cla97C10G189550	Watermelon (97103) v2	cmawmbB718
CmaCh04G009620	Bhi11G000466	Wax gourd	cmawgoB0821
CmaCh04G009620	CsGy3G005090	Cucumber (Gy14) v2	cgybcmaB416
CmaCh04G009620	Carg00078	Silver-seed gourd	carcmaB0948

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G009620	Cucurbita maxima (Rimu)	cmacmaB331
CmaCh04G009620	Cucurbita moschata (Rifu)	cmacmoB699
CmaCh04G009620	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G009620	Watermelon (97103) v2	cmawmbB780