Carg00078 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00078
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CASP-like protein
Location	Cucurbita_argyrosperma_scaffold_001 : 325600 .. 326298 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTAACTAAATATCTATTTACATCAAATTTCTTCATCTGGGTCTGCTCCAAATTTAAATCCGGTAATGGGTTTTGATTCATTCTCAGGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGGTTTATACAATTCCGTCCATTCCCATTTGAATTTATTTGTGTAATTGAATTTGTTGTGTGATGGGTGGTTCAGATTGTGGCTTATTTGATGGTGACATCGGTAGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTATGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGTGAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAG

mRNA sequence

ATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTAGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTATGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGTGAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAG

Coding sequence (CDS)

ATGGAAGAAACCCACAATCCCCACCCTCCAATCCTCAAACTCCTCGACGTCTCTCTGCGACTCTTCTCCGTTCCTCTCACCATCGCTTCAATCTGCCTCACCGTCACCAACCGCCAGGACAATCCCGACTACGGCACCTTGGAGTTCCACAATCTCAGCGGCCTCAAGTACATGGTCTGCATATCCGCCATCGCCGCCGCGTACGCTTTGTTCGCCGCCGCGTTCTCCTGGCTCCGATGCTTCGCCGCCAAGGCTTGGGTCTTCTTCGTTTCCGACCAGATTGTGGCTTATTTGATGGTGACATCGGTAGCGGCGGTGGGGGAGATTCTGTATTTGGCTTACTATGGAGACAGGGAGGTTTCGTGGAGTGAGGCTTACAGCACATATGGGAAGTTCTGCGTGAAGATGAAGATGGCTCTGGTTTTTCAAGCTTTGGGATTTGGGTGTTTCTTTGTGGTGGCTGTGGTTTCTGCTTTTAGGGCTTTTAGTATCTTCGACCCTCCTCTTCCTTCTCAACACCTTCAACACCAAAGCAATTAG

Protein sequence

MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQSN

Homology

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BLAST of Carg00078 vs. NCBI nr
Match: XP_022942434.1 (CASP-like protein 2D1 [Cucurbita moschata])

HSP 1 Score: 351.3 bits (900), Expect = 2.0e-93
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQSN 180
           SWSEAYSTYGKFC KMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQSN
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQSN 179

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BLAST of Carg00078 vs. NCBI nr
Match: XP_023545873.1 (CASP-like protein 2D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.9 bits (886), Expect = 8.2e-92
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMV 
Sbjct: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVS 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV
Sbjct: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQSN 180
           SWSEAYSTYGKFC KMKMALVFQALGFGCFFVVAVVSAFRAF IFDPPLPSQHLQHQSN
Sbjct: 121 SWSEAYSTYGKFCEKMKMALVFQALGFGCFFVVAVVSAFRAFRIFDPPLPSQHLQHQSN 179

[Close]

BLAST of Carg00078 vs. NCBI nr
Match: XP_022984776.1 (CASP-like protein 2D1 [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 2.5e-80
Identity = 158/179 (88.27%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           MEETHN HPPILKLLDVS                 TNRQDNPDYGTLEFHNLSGLKYMVC
Sbjct: 1   MEETHNSHPPILKLLDVSXXXXXXXXXXXXXXXXXTNRQDNPDYGTLEFHNLSGLKYMVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAAAYALFAAAFSW+RCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV
Sbjct: 61  ISAIAAAYALFAAAFSWIRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120

Query: 121 SWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQSN 180
           SWSEAYSTYGKFC KMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS HLQHQSN
Sbjct: 121 SWSEAYSTYGKFCDKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSHHLQHQSN 179

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BLAST of Carg00078 vs. NCBI nr
Match: XP_008463406.1 (PREDICTED: CASP-like protein 2D1 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 4.0e-62
Identity = 129/173 (74.57%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET+N  P + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MAETNN--PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQH 174
           SWSEA S+YGKFC  MKMAL+FQALGFGCFF++A++SAFRAFS+F PPL S H
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISSH 171

[Close]

BLAST of Carg00078 vs. NCBI nr
Match: XP_004149352.1 (PREDICTED: CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical protein Csa_3G076530 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 6.4e-60
Identity = 126/171 (73.68%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET++  P + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MTETNS--PSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           SWSEA S+YGKFC  MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

[Close]

BLAST of Carg00078 vs. TAIR10
Match: AT5G54980.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-40
Identity = 84/164 (51.22%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 9   PPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           Y  +C K+ +AL         F  ++V+SA+RAFS FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

[Close]

BLAST of Carg00078 vs. TAIR10
Match: AT1G17200.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-19
Identity = 49/160 (30.63%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 12  LKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALF 71
           ++  +  LRL  V L +A++ + + + + N ++G++ + NL+  +Y+V  + I A Y+L 
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLL 89

Query: 72  AAAFSWLRCFAA---KAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 131
           +AA + +   ++   + W FF  DQ++ YL++ + A   E+LYLAY GD  ++WS+A S+
Sbjct: 90  SAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSS 149

Query: 132 YGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           YG FC +   +++        + V++++S+++ F+ FDPP
Sbjct: 150 YGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPP 188

[Close]

BLAST of Carg00078 vs. TAIR10
Match: AT3G14380.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 81.6 bits (200), Expect = 5.2e-16
Identity = 49/159 (30.82%), Postives = 93/159 (58.49%), Query Frame = 0


Query: 13  KLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYALFA 72
           K  +  LR+ S+ L+I  + + + N   N ++G++ + N+    Y+V  + + AAY+L +
Sbjct: 21  KSAEAVLRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLVSANGVCAAYSLLS 80

Query: 73  A-AFSWLRCFAAKAWV--FFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 132
           A A   L C  +K  V   F+ DQ+V Y+++ + A   E +YLAYYG+  ++WS A  +Y
Sbjct: 81  ALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSY 140

Query: 133 GKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP 169
           G FC    +++VF  +    + +++++S++R F+ F+ P
Sbjct: 141 GSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

[Close]

BLAST of Carg00078 vs. Swiss-Prot
Match: sp|A7P0P3|CSPL3_VITVI (CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.1e-53
Identity = 107/170 (62.94%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 8   HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAA 67
           H P LKL+D SLRL  +PL++A+I LTVTN+QDN  YG LEF NL+GLKYMVCIS I+A 
Sbjct: 14  HIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLKYMVCISGISAG 73

Query: 68  YALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYS 127
           YAL A   SW+RC   KAW+FFVSDQI+AYLMVTS AAV EILYLAY GDR VSWSEA S
Sbjct: 74  YALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACS 133

Query: 128 TYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQHLQHQ 178
           +YG+FC ++ +AL   AL   CF V+AV+SA+R FS+F+PP+ S+ ++ +
Sbjct: 134 SYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEVEEE 183

[Close]

BLAST of Carg00078 vs. Swiss-Prot
Match: sp|B9HTL5|CSPLC_POPTR (CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-51
Identity = 103/159 (64.78%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 11  ILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYAL 70
           +LKLLD SLRL  +PL++A+I LTVTN+QDN  YG L++ +L+GLKYMV IS I A+YA 
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 71  FAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTYG 130
            AA  +W+RC   K W+FFVSDQIVAYLMVTS  AV EILYLAY GDREVSWSEA ++YG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 131 KFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPL 170
           KFC +MK+A++  AL   CF ++AV+SA+RAFSIF+PPL
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPL 159

[Close]

BLAST of Carg00078 vs. Swiss-Prot
Match: sp|C6T2J5|CSPL4_SOYBN (CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-51
Identity = 104/171 (60.82%), Postives = 135/171 (78.95%), Query Frame = 0


Query: 6   NPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIA 65
           N H P+L   D SLRL ++PL++A++ +TVTN++DN  YG L+++NLS LKYMV +SA+ 
Sbjct: 13  NHHLPMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALC 72

Query: 66  AAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEA 125
           A YAL AAA S +RCF +KAW+FFVSDQIVAYL +TSVAAV E+ YLAY G +E SWSEA
Sbjct: 73  ACYALLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEA 132

Query: 126 YSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP-LPSQHLQ 176
            S+YG FC K+K+AL+   + F CFFV+AV+SAFRAFS+FDPP + SQ +Q
Sbjct: 133 CSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQEVQ 183

[Close]

BLAST of Carg00078 vs. Swiss-Prot
Match: sp|B9SV84|CSPL7_RICCO (CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-48
Identity = 99/163 (60.74%), Postives = 126/163 (77.30%), Query Frame = 0


Query: 10  PILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAYA 69
           P+LKLLD SLR+  +PL+ A+I LTVTN QDN  YG L++ N+ GLKYMVCISAI A+YA
Sbjct: 3   PLLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYA 62

Query: 70  LFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYSTY 129
             AA   W++C   K W+FFVSDQI+AYLMVTSVAA  EILY+AY GD++V+WSEA ++Y
Sbjct: 63  FVAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSY 122

Query: 130 GKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           GKFC  MK AL+  AL    F V+AV+SA+RAFS++ PP+ S+
Sbjct: 123 GKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSK 165

[Close]

BLAST of Carg00078 vs. Swiss-Prot
Match: sp|Q9FFT2|CSPLX_ARATH (CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 84/164 (51.22%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 9   PPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAAY 68
           P  LK++D  LRL  VPL++A+I LTVTN + NPDYG LE++++ GLKYMV +SAI+A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 69  ALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYST 128
           AL +   SW+ C  +KAW+FF+ DQ++AY+M TSVA   EI+YL   GD+ V+WSE  S+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 129 YGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           Y  +C K+ +AL         F  ++V+SA+RAFS FDPP  SQ
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQ 189

[Close]

BLAST of Carg00078 vs. TrEMBL
Match: tr|A0A1S3CJM6|A0A1S3CJM6_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.6e-62
Identity = 129/173 (74.57%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET+N  P + K LD SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MAETNN--PSLFKFLDFSLRLCSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQH 174
           SWSEA S+YGKFC  MKMAL+FQALGFGCFF++A++SAFRAFS+F PPL S H
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFGCFFLLAIISAFRAFSVFPPPLISSH 171

[Close]

BLAST of Carg00078 vs. TrEMBL
Match: tr|A0A0A0L6A1|A0A0A0L6A1_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.2e-60
Identity = 126/171 (73.68%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MEETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVC 60
           M ET++  P + K LD SLRL SVP T+A++ LTVTNRQDNPDYG LEFHNLSGLKY+VC
Sbjct: 1   MTETNS--PSLFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVC 60

Query: 61  ISAIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREV 120
           ISAIAA YA  AAA S  R F  +AWVFFVSDQIVAYLMV S AAVGEILY+AY GDREV
Sbjct: 61  ISAIAAVYAFLAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREV 120

Query: 121 SWSEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPS 172
           SWSEA S+YGKFC  MKMAL+FQALGF CFF +A++SAFRAFS+F PPL S
Sbjct: 121 SWSEACSSYGKFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLIS 169

[Close]

BLAST of Carg00078 vs. TrEMBL
Match: tr|A0A2N9HS39|A0A2N9HS39_FAGSY (CASP-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42353 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.4e-52
Identity = 111/171 (64.91%), Postives = 135/171 (78.95%), Query Frame = 0


Query: 8   HPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCISAIAAA 67
           H P+LK LD SLR+  +PL+ A+I LTVTN+QDN  YG LEF NL GLKY+VCISAI A 
Sbjct: 16  HTPMLKFLDCSLRVCVIPLSAAAIWLTVTNQQDNSTYGKLEFSNLIGLKYLVCISAICAG 75

Query: 68  YALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSWSEAYS 127
           YA  AA  SW+RC   KAW+FFV+DQI AYLMVTS+AAV EILYLAY GDRE++WSE  S
Sbjct: 76  YAFIAAISSWIRCLVKKAWLFFVTDQICAYLMVTSMAAVLEILYLAYNGDREITWSEECS 135

Query: 128 TYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPP-LPSQHLQHQ 178
           +YGKFC KMK+A VF AL   CF V+AV+SA+RAFS+F+PP LPS+ ++ +
Sbjct: 136 SYGKFCNKMKLAFVFHALALCCFIVLAVISAYRAFSMFEPPTLPSKEVEEE 186

[Close]

BLAST of Carg00078 vs. TrEMBL
Match: tr|A0A0B0PVY5|A0A0B0PVY5_GOSAR (CASP-like protein OS=Gossypium arboreum OX=29729 GN=F383_12077 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 7.2e-52
Identity = 112/170 (65.88%), Postives = 135/170 (79.41%), Query Frame = 0


Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD++V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDQKVTW 127

Query: 123 SEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           SEA  +YGKFC KMK+AL+  AL   CF V+A++SA+R FS FDPP  S+
Sbjct: 128 SEACDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSK 177

[Close]

BLAST of Carg00078 vs. TrEMBL
Match: tr|A0A1U8M0E6|A0A1U8M0E6_GOSHI (CASP-like protein OS=Gossypium hirsutum OX=3635 GN=LOC107932715 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.7e-51
Identity = 112/170 (65.88%), Postives = 134/170 (78.82%), Query Frame = 0


Query: 3   ETHNPHPPILKLLDVSLRLFSVPLTIASICLTVTNRQDNPDYGTLEFHNLSGLKYMVCIS 62
           E+ N   PILKLLD SLR+  +PL++A+I LTVTN+QDN  YG ++F+NL GLKYMVC S
Sbjct: 8   ESSNTQNPILKLLDCSLRVSVIPLSVATIWLTVTNKQDNSIYGDVKFNNLLGLKYMVCTS 67

Query: 63  AIAAAYALFAAAFSWLRCFAAKAWVFFVSDQIVAYLMVTSVAAVGEILYLAYYGDREVSW 122
           AI AAYALFAA  SW+R F  KAW+FFVSDQIVAYLMVTS AAV EILYLAY GD +V+W
Sbjct: 68  AICAAYALFAAIASWIRYFVTKAWLFFVSDQIVAYLMVTSGAAVMEILYLAYNGDIKVTW 127

Query: 123 SEAYSTYGKFCVKMKMALVFQALGFGCFFVVAVVSAFRAFSIFDPPLPSQ 173
           SEA  +YGKFC KMK+AL+  AL   CF V+A++SA+R FS FDPP  S+
Sbjct: 128 SEAGDSYGKFCNKMKVALILHALAVCCFMVLALISAYRVFSKFDPPFFSK 177

The following BLAST results are available for this feature:

BLAST of Carg00078 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942434.1	2.0e-93	99.44	CASP-like protein 2D1 [Cucurbita moschata]	[more]
XP_023545873.1	8.2e-92	98.32	CASP-like protein 2D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022984776.1	2.5e-80	88.27	CASP-like protein 2D1 [Cucurbita maxima]	[more]
XP_008463406.1	4.0e-62	74.57	PREDICTED: CASP-like protein 2D1 [Cucumis melo]	[more]
XP_004149352.1	6.4e-60	73.68	PREDICTED: CASP-like protein 2D1 [Cucumis sativus] >KGN56117.1 hypothetical prot...	[more]

BLAST of Carg00078 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54980.1	1.4e-40	51.22	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.1	2.3e-19	30.63	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	5.2e-16	30.82	Uncharacterised protein family (UPF0497)	[more]

BLAST of Carg00078 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A7P0P3\|CSPL3_VITVI	5.1e-53	62.94	CASP-like protein 2D1 OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00570 PE=2 SV=1	[more]
sp\|B9HTL5\|CSPLC_POPTR	2.2e-51	64.78	CASP-like protein 2D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_833824 PE=3 S...	[more]
sp\|C6T2J5\|CSPL4_SOYBN	2.8e-51	60.82	CASP-like protein 2D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|B9SV84\|CSPL7_RICCO	1.3e-48	60.74	CASP-like protein 2D1 OS=Ricinus communis OX=3988 GN=RCOM_1302390 PE=2 SV=1	[more]
sp\|Q9FFT2\|CSPLX_ARATH	2.5e-39	51.22	CASP-like protein 2D1 OS=Arabidopsis thaliana OX=3702 GN=At5g54980 PE=2 SV=1	[more]

BLAST of Carg00078 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJM6\|A0A1S3CJM6_CUCME	2.6e-62	74.57	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501577 PE=3 SV=1	[more]
tr\|A0A0A0L6A1\|A0A0A0L6A1_CUCSA	4.2e-60	73.68	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G076530 PE=3 SV=1	[more]
tr\|A0A2N9HS39\|A0A2N9HS39_FAGSY	1.4e-52	64.91	CASP-like protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42353 PE=3 SV=1	[more]
tr\|A0A0B0PVY5\|A0A0B0PVY5_GOSAR	7.2e-52	65.88	CASP-like protein OS=Gossypium arboreum OX=29729 GN=F383_12077 PE=3 SV=1	[more]
tr\|A0A1U8M0E6\|A0A1U8M0E6_GOSHI	2.7e-51	65.88	CASP-like protein OS=Gossypium hirsutum OX=3635 GN=LOC107932715 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00078-RA	Carg00078-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 13..148 e-value: 1.1E-28 score: 99.8
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 17..160 e-value: 4.3E-18 score: 63.6
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 8..175
None	No IPR available	PANTHER	PTHR11615:SF143	CASP-LIKE PROTEIN 2D1	coord: 8..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00078	Cla005320	Watermelon (97103) v1	carwmB0659
Carg00078	Csa3G076530	Cucumber (Chinese Long) v2	carcuB0684
Carg00078	MELO3C025364	Melon (DHL92) v3.5.1	carmeB0672
Carg00078	ClCG10G005310	Watermelon (Charleston Gray)	carwcgB0641
Carg00078	CSPI03G05020	Wild cucumber (PI 183967)	carcpiB0696
Carg00078	Cucsa.060070	Cucumber (Gy14) v1	carcgyB0738
Carg00078	CmaCh04G009620	Cucurbita maxima (Rimu)	carcmaB0948
Carg00078	CmoCh04G010380	Cucurbita moschata (Rifu)	carcmoB0923
Carg00078	Lsi05G005840	Bottle gourd (USVL1VR-Ls)	carlsiB616
Carg00078	Cp4.1LG01g07980	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00078	CsGy3G005090	Cucumber (Gy14) v2	carcgybB0659
Carg00078	MELO3C025364.2	Melon (DHL92) v3.6.1	carmedB0684
Carg00078	CsaV3_3G005020	Cucumber (Chinese Long) v3	carcucB0698
Carg00078	Cla97C10G189550	Watermelon (97103) v2	carwmbB0686
Carg00078	Bhi11G000466	Wax gourd	carwgoB0777

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00078	Cucurbita maxima (Rimu)	carcmaB0944
Carg00078	Cucurbita moschata (Rifu)	carcmoB0919