Cp4.1LG01g05210 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g05210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionThioredoxin
LocationCp4.1LG01 : 876375 .. 877505 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGACATATTCTTTCTCTTCTTTACAAAGGTGAAGAACATTTTGAAATATTGAAATACATAAAGAAGTCAAACAAACAATACCCATTCAATGTATAAAAAAATGGGGAAACGAGTAAAGCATTTGAAATATTTATACATAAAACTACGAAACGGGCGAATGGTGCTTTCCAGAGCTGCGTGGTCCTGAAATTCTCCAGTCCCACATCGCTATTTCTCAATTTCCCCTCCTCTTCAACTCCTATAAATTCACCCGCTCAGCTCTCAACTCTCCATTCGGTTTAATACACAGTTCCCATTTCTTCTTCCTTTTCCTTTTCCTTTTCTTCTGTAAGCGACTAAAATGGCGGACATGGGGAAAGTGGTTTCTTGCCCTACAGTTGCCTCATGGAAGAAACAGTTCCTCAAAGCCAAACAACACAACAAACTGGTACTCTTTTTTCCTTCCTTTCTCTTTTCACCACGCATACAACAAATCTCATTCTACTATTCTTTTCAACAGCTGGTTGTCAATTTCACTGCAACATGGTGCCGCCCGTGTCGTGCCATGGCTCCACTGCTCGACGATTTAGCAAAGAAATCGTGCAATAACGTGACGTTCTTGAAAGTCGACGTTGATGAACTCATGGTATGTTCCAAACTCTTCGAACTGAGAAATTCACTTACTTCAAGGACGCAACAACCGTAACAATAACCGTGATTATCATTGTAGAGTGTGGCCAATGAGTTAGGAGTGGGCGCCCTTCCATCGTTTCAATTCTTCAAGAACGGACAGTTGGTGGACAAGTTCGTGGGCGCAAAGAAAGATGTATTGCTCAACACCGTGTCCAAACATACCGCATGAAGCTGGTCTTCTTATCAGAGTTTGCTTTTCATAAATAAACAACAATGCTGCAAAGAAACATGAAATGTTGTGCAACAAATTTACACGTTTATGTTCTATGGAGACGGTCAGTGAATCTTTGTCATGGCTATCAACCAACCCTCTCTGAATTAATAAATCTTTTGTTCTTCCAAACCAACTATAAACCCGGGTTTGATATTTAATTAAGGCAGAGAATATATTCAAAAAATTTATTATAATTAAGAATTCTGAATGTGGAATGCTAGAAAAGAATTTTCGTAGTCTTCT

mRNA sequence

AGGGACATATTCTTTCTCTTCTTTACAAAGGTGAAGAACATTTTGAAATATTGAAATACATAAAGAAGTCAAACAAACAATACCCATTCAATGTATAAAAAAATGGGGAAACGAGTAAAGCATTTGAAATATTTATACATAAAACTACGAAACGGGCGAATGGTGCTTTCCAGAGCTGCGTGGTCCTGAAATTCTCCAGTCCCACATCGCTATTTCTCAATTTCCCCTCCTCTTCAACTCCTATAAATTCACCCGCTCAGCTCTCAACTCTCCATTCGGTTTAATACACAGTTCCCATTTCTTCTTCCTTTTCCTTTTCCTTTTCTTCTGTAAGCGACTAAAATGGCGGACATGGGGAAAGTGGTTTCTTGCCCTACAGTTGCCTCATGGAAGAAACAGTTCCTCAAAGCCAAACAACACAACAAACTGCTGGTTGTCAATTTCACTGCAACATGGTGCCGCCCGTGTCGTGCCATGGCTCCACTGCTCGACGATTTAGCAAAGAAATCGTGCAATAACGTGACGTTCTTGAAAGTCGACGTTGATGAACTCATGAGTGTGGCCAATGAGTTAGGAGTGGGCGCCCTTCCATCGTTTCAATTCTTCAAGAACGGACAGTTGGTGGACAAGTTCGTGGGCGCAAAGAAAGATGTATTGCTCAACACCGTGTCCAAACATACCGCATGAAGCTGGTCTTCTTATCAGAGTTTGCTTTTCATAAATAAACAACAATGCTGCAAAGAAACATGAAATGTTGTGCAACAAATTTACACGTTTATGTTCTATGGAGACGGTCAGTGAATCTTTGTCATGGCTATCAACCAACCCTCTCTGAATTAATAAATCTTTTGTTCTTCCAAACCAACTATAAACCCGGGTTTGATATTTAATTAAGGCAGAGAATATATTCAAAAAATTTATTATAATTAAGAATTCTGAATGTGGAATGCTAGAAAAGAATTTTCGTAGTCTTCT

Coding sequence (CDS)

ATGGCGGACATGGGGAAAGTGGTTTCTTGCCCTACAGTTGCCTCATGGAAGAAACAGTTCCTCAAAGCCAAACAACACAACAAACTGCTGGTTGTCAATTTCACTGCAACATGGTGCCGCCCGTGTCGTGCCATGGCTCCACTGCTCGACGATTTAGCAAAGAAATCGTGCAATAACGTGACGTTCTTGAAAGTCGACGTTGATGAACTCATGAGTGTGGCCAATGAGTTAGGAGTGGGCGCCCTTCCATCGTTTCAATTCTTCAAGAACGGACAGTTGGTGGACAAGTTCGTGGGCGCAAAGAAAGATGTATTGCTCAACACCGTGTCCAAACATACCGCATGA

Protein sequence

MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVTFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA
Homology
[Close]
BLAST of Cp4.1LG01g05210 vs. Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-29
Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           A+ G+V+ C T   W  Q  KAK+ NKL+V++FTA+WC PCR +AP+ +DLAKK  ++  
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHT 114
           F KVDVDEL SVA E GV A+P+F F K G++VDK VGA K+ L   + KHT
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]
BLAST of Cp4.1LG01g05210 vs. Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.2e-29
Identity = 61/113 (53.98%), Postives = 81/113 (71.68%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           A+ G+V+ C TV +W +Q  K      L+VV+FTA+WC PCR +AP L +LAKK   NVT
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKK-LPNVT 62

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
           FLKVDVDEL +VA+E  V ++P+F F K G+++DK VGAKKD L  T++KH A
Sbjct: 63  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-28
Identity = 59/113 (52.21%), Postives = 82/113 (72.57%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           ++ G+V++C TV +W +Q  KA +   L+VV+FTA+WC PCR +AP   DLAKK   NV 
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKK-LPNVL 62

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
           FLKVD DEL SVA++  + A+P+F F K G+++DK VGAKKD L +T++KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-28
Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           A+ G+V+ C  +  W  Q   AKQ NKL+V++FTA+WC PCR +AP+  DLAKK  ++  
Sbjct: 3   AEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAI 62

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHT 114
           F KVDVDEL +VA E GV A+P+F   K+G +VDK VGA+K+ L  T++KHT
Sbjct: 63  FFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKHT 114

[Close]
BLAST of Cp4.1LG01g05210 vs. Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.5e-26
Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA+  +V++C TV  W ++F KAK   KL+V++FTA+WC PCR + P + +LAKK   +V
Sbjct: 1   MAEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKK-FPHV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKH 113
            F KVDVD+L  VA E  V A+PSF   K GQ V++ VGA+KD LL+ ++ H
Sbjct: 61  AFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVH 111

[Close]
BLAST of Cp4.1LG01g05210 vs. TrEMBL
Match: A0A0A0KSB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 5.9e-46
Identity = 93/114 (81.58%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           M DMGKVVSC TV SWK+Q LKAKQ NKL+VVNFTATWC PCR MAP+L+DLA K  NNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
           TFLKVDVDELMSVA+E GVGALPSFQFFKNG+LVDKFVGA+KDVL  TVSKH A
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. TrEMBL
Match: A0A0A0KLS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-41
Identity = 81/114 (71.05%), Postives = 99/114 (86.84%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA+MGKV+SC TV+SWK+  LKA+Q NKL+VVNFTA+WC PCR MAP+L++LAKK  NNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
            FLKVD+DELMS+A E GV ++PSFQF KNG+LVDKFVGAKK +L NT+SKH+A
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. TrEMBL
Match: A0A0A0KLR8_CUCSA (Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 8.6e-37
Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA+MGKV+ C T+ASW +Q LKA+Q+NKLLVVNFTA WC PC AMA +L++LAKK  NNV
Sbjct: 1   MAEMGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKK-MNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKH 113
            FLKVD+DEL +VANE  V ALPS+ F KNG+LV+KF GAKKDVL +TVSKH
Sbjct: 61  IFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 111

[Close]
BLAST of Cp4.1LG01g05210 vs. TrEMBL
Match: A0A0A0LGF7_CUCSA (Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-30
Identity = 67/112 (59.82%), Postives = 86/112 (76.79%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA+  +V++C TV SWK+Q LK KQ +KL+VV+FTA WC PCRA+AP+  +LA+K  +NV
Sbjct: 1   MAEKSQVIACHTVESWKQQLLKGKQFDKLIVVDFTAAWCGPCRAIAPVFVELAEK-MSNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKH 113
            FLKVDVD+L +VA E GV ALP F F KNG++VD+FVGA+KD L   VS H
Sbjct: 61  IFLKVDVDKLTTVAAEWGVSALPCFMFLKNGKMVDRFVGARKDALRKLVSHH 111

[Close]
BLAST of Cp4.1LG01g05210 vs. TrEMBL
Match: R0GN56_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010677mg PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-28
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           A+ G+V+ C     W  Q  KAK+ NKL+V++FTA+WC PCR +AP+  DLAKK  ++  
Sbjct: 3   AEEGQVIGCHANDVWTVQLDKAKESNKLIVIDFTASWCPPCRLIAPVFTDLAKKFMSSAI 62

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHT 114
           F KVDVDEL SVA E GV A+P+F F K G++VDK VGA+KD LL T+ KHT
Sbjct: 63  FFKVDVDELQSVAQEFGVEAMPTFVFMKAGEVVDKLVGARKDDLLATIVKHT 114

[Close]
BLAST of Cp4.1LG01g05210 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-30
Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           A+ G+V+ C T   W  Q  KAK+ NKL+V++FTA+WC PCR +AP+ +DLAKK  ++  
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHT 114
           F KVDVDEL SVA E GV A+P+F F K G++VDK VGA K+ L   + KHT
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]
BLAST of Cp4.1LG01g05210 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 127.1 bits (318), Expect = 6.9e-30
Identity = 59/113 (52.21%), Postives = 82/113 (72.57%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           ++ G+V++C TV +W +Q  KA +   L+VV+FTA+WC PCR +AP   DLAKK   NV 
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKK-LPNVL 62

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
           FLKVD DEL SVA++  + A+P+F F K G+++DK VGAKKD L +T++KH A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-25
Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA  G+V++C T+  W ++   A +  KL+V++FTA+WC PCR +AP+  ++AKK   NV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKK-FTNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKH 113
            F K+DVDEL +VA E  V A+P+F F K G ++D+ VGA KD +   + KH
Sbjct: 61  VFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]
BLAST of Cp4.1LG01g05210 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-25
Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA  G+V++C TV  W ++   A +  KL+V++FTATWC PCR +AP+  DLAKK   +V
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHL-DV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKH 113
            F KVDVDEL +VA E  V A+P+F F K G++ +  VGA K+ ++  + KH
Sbjct: 61  VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]
BLAST of Cp4.1LG01g05210 vs. TAIR10
Match: AT5G39950.1 (AT5G39950.1 thioredoxin 2)

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-21
Identity = 48/110 (43.64%), Postives = 72/110 (65.45%), Query Frame = 1 

Query: 2   ADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNVT 61
           ++  +V+   + A W+  F + K+ NKLLVV+F+A+WC PCR + P +  +A K  N+V 
Sbjct: 22  SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKF-NDVD 81

Query: 62  FLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSK 112
           F+K+DVDEL  VA E  V A+P+F   K G+ +++ +GAKKD L   VSK
Sbjct: 82  FVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

[Close]
BLAST of Cp4.1LG01g05210 vs. NCBI nr
Match: gi|449464452|ref|XP_004149943.1| (PREDICTED: thioredoxin H1-like [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 8.5e-46
Identity = 93/114 (81.58%), Postives = 100/114 (87.72%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           M DMGKVVSC TV SWK+Q LKAKQ NKL+VVNFTATWC PCR MAP+L+DLA K  NNV
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
           TFLKVDVDELMSVA+E GVGALPSFQFFKNG+LVDKFVGA+KDVL  TVSKH A
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. NCBI nr
Match: gi|659129896|ref|XP_008464900.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-45
Identity = 92/114 (80.70%), Postives = 98/114 (85.96%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           M DMGKVVSC TV SWK+Q LKAKQ+NKL+VVNFTATWC PCR MAP+L DLA K  NNV
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
             LKVDVDELMSVANE GVGALPSFQFFKNG+LVDKFVGA+KDVL  TVSKH A
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. NCBI nr
Match: gi|659129894|ref|XP_008464899.1| (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 9.7e-42
Identity = 80/114 (70.18%), Postives = 101/114 (88.60%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA+MGKV+SC TV+SWK+  LKA+Q+NKL+VVNFTA+WC PCR MAP+L++LAKK  NNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
            FLKVD+DELMS+A E GV ++PSFQF KNG+LVDKFVGAKK++L +T+SKH+A
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHSA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. NCBI nr
Match: gi|449464454|ref|XP_004149944.1| (PREDICTED: thioredoxin H-type-like [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-41
Identity = 81/114 (71.05%), Postives = 99/114 (86.84%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MA+MGKV+SC TV+SWK+  LKA+Q NKL+VVNFTA+WC PCR MAP+L++LAKK  NNV
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKHTA 115
            FLKVD+DELMS+A E GV ++PSFQF KNG+LVDKFVGAKK +L NT+SKH+A
Sbjct: 61  IFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHSA 114

[Close]
BLAST of Cp4.1LG01g05210 vs. NCBI nr
Match: gi|659129892|ref|XP_008464898.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 161.4 bits (407), Expect = 9.4e-37
Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 1 

Query: 1   MADMGKVVSCPTVASWKKQFLKAKQHNKLLVVNFTATWCRPCRAMAPLLDDLAKKSCNNV 60
           MAD+GKV++C T+ASW +Q LKA+Q+NKLLVVNFTA WC PC AMA +L++LAKK  NNV
Sbjct: 1   MADVGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKK-MNNV 60

Query: 61  TFLKVDVDELMSVANELGVGALPSFQFFKNGQLVDKFVGAKKDVLLNTVSKH 113
            FLKVD+DEL SVA E  V ALPS+ F KNG+LV+KF GAKKDVL +TVSKH
Sbjct: 61  IFLKVDIDELNSVAKEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 111

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g05210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH4_ARATH4.2e-2953.57Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2[more]
TRXH_RICCO7.2e-2953.98Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
TRXH1_ARATH1.2e-2852.21Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1[more]
TRXH2_BRANA2.1e-2851.79Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1[more]
TRXH_FAGES7.5e-2649.11Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1[more]
BLAST of Cp4.1LG01g05210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSB1_CUCSA5.9e-4681.58Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190500 PE=4 SV=1[more]
A0A0A0KLS7_CUCSA1.2e-4171.05Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190490 PE=4 SV=1[more]
A0A0A0KLR8_CUCSA8.6e-3769.64Thioredoxin H-type OS=Cucumis sativus GN=Csa_5G189900 PE=4 SV=1[more]
A0A0A0LGF7_CUCSA1.2e-3059.82Thioredoxin OS=Cucumis sativus GN=Csa_3G865340 PE=3 SV=1[more]
R0GN56_9BRAS3.3e-2855.36Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010677mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g05210 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19730.12.4e-3053.57 Thioredoxin superfamily protein[more]
AT3G51030.16.9e-3052.21 thioredoxin H-type 1[more]
AT1G45145.11.0e-2545.54 thioredoxin H-type 5[more]
AT5G42980.12.3e-2547.32 thioredoxin 3[more]
AT5G39950.11.5e-2143.64 thioredoxin 2[more]
BLAST of Cp4.1LG01g05210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464452|ref|XP_004149943.1|8.5e-4681.58PREDICTED: thioredoxin H1-like [Cucumis sativus][more]
gi|659129896|ref|XP_008464900.1|3.2e-4580.70PREDICTED: thioredoxin H1-like [Cucumis melo][more]
gi|659129894|ref|XP_008464899.1|9.7e-4270.18PREDICTED: thioredoxin H-type-like [Cucumis melo][more]
gi|449464454|ref|XP_004149944.1|1.7e-4171.05PREDICTED: thioredoxin H-type-like [Cucumis sativus][more]
gi|659129892|ref|XP_008464898.1|9.4e-3769.64PREDICTED: thioredoxin H1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
IPR005746Thioredoxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g05210.1Cp4.1LG01g05210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 1..114
score: 1.0
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 13..112
score: 3.1
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 5..112
score: 1.93
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 14..112
score: 1.0
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 1..114
score: 12
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 78..89
score: 1.2E-5coord: 38..47
score: 1.2E-5coord: 30..38
score: 1.
NoneNo IPR availablePANTHERPTHR10438:SF274THIOREDOXIN H1coord: 1..114
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g05210Cucsa.164810Cucumber (Gy14) v1cgycpeB0457
Cp4.1LG01g05210CmaCh04G001780Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g05210CmoCh04G001800Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g05210Csa5G190490Cucumber (Chinese Long) v2cpecuB438
Cp4.1LG01g05210MELO3C026569Melon (DHL92) v3.5.1cpemeB378
Cp4.1LG01g05210CSPI05G10150Wild cucumber (PI 183967)cpecpiB438
Cp4.1LG01g05210Lsi04G009290Bottle gourd (USVL1VR-Ls)cpelsiB359
Cp4.1LG01g05210MELO3C034311.2Melon (DHL92) v3.6.1cpemedB440
Cp4.1LG01g05210CsaV3_5G008640Cucumber (Chinese Long) v3cpecucB0542
Cp4.1LG01g05210Bhi07G000596Wax gourdcpewgoB0576
Cp4.1LG01g05210Carg18348Silver-seed gourdcarcpeB0130
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g05210Cucurbita pepo (Zucchini)cpecpeB072
Cp4.1LG01g05210Cucurbita pepo (Zucchini)cpecpeB204
Cp4.1LG01g05210Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g05210Cucurbita pepo (Zucchini)cpecpeB377
Cp4.1LG01g05210Cucurbita pepo (Zucchini)cpecpeB401
Cp4.1LG01g05210Cucurbita pepo (Zucchini)cpecpeB394
Cp4.1LG01g05210Cucumber (Gy14) v1cgycpeB0366
Cp4.1LG01g05210Cucurbita maxima (Rimu)cmacpeB322
Cp4.1LG01g05210Cucurbita maxima (Rimu)cmacpeB723
Cp4.1LG01g05210Cucurbita maxima (Rimu)cmacpeB730
Cp4.1LG01g05210Cucurbita maxima (Rimu)cmacpeB828
Cp4.1LG01g05210Cucurbita moschata (Rifu)cmocpeB284
Cp4.1LG01g05210Cucurbita moschata (Rifu)cmocpeB582
Cp4.1LG01g05210Cucurbita moschata (Rifu)cmocpeB675
Cp4.1LG01g05210Cucurbita moschata (Rifu)cmocpeB683
Cp4.1LG01g05210Wild cucumber (PI 183967)cpecpiB469
Cp4.1LG01g05210Cucumber (Chinese Long) v2cpecuB467
Cp4.1LG01g05210Bottle gourd (USVL1VR-Ls)cpelsiB318
Cp4.1LG01g05210Bottle gourd (USVL1VR-Ls)cpelsiB343
Cp4.1LG01g05210Bottle gourd (USVL1VR-Ls)cpelsiB349
Cp4.1LG01g05210Watermelon (Charleston Gray)cpewcgB410
Cp4.1LG01g05210Watermelon (97103) v1cpewmB403
Cp4.1LG01g05210Watermelon (97103) v1cpewmB467
Cp4.1LG01g05210Melon (DHL92) v3.5.1cpemeB405
Cp4.1LG01g05210Cucumber (Gy14) v2cgybcpeB510
Cp4.1LG01g05210Cucumber (Gy14) v2cgybcpeB647
Cp4.1LG01g05210Cucumber (Gy14) v2cgybcpeB795
Cp4.1LG01g05210Cucumber (Gy14) v2cgybcpeB806
Cp4.1LG01g05210Melon (DHL92) v3.6.1cpemedB451
Cp4.1LG01g05210Melon (DHL92) v3.6.1cpemedB471
Cp4.1LG01g05210Melon (DHL92) v3.6.1cpemedB506
Cp4.1LG01g05210Silver-seed gourdcarcpeB0376
Cp4.1LG01g05210Silver-seed gourdcarcpeB0467
Cp4.1LG01g05210Silver-seed gourdcarcpeB0939
Cp4.1LG01g05210Silver-seed gourdcarcpeB1387
Cp4.1LG01g05210Cucumber (Chinese Long) v3cpecucB0566
Cp4.1LG01g05210Cucumber (Chinese Long) v3cpecucB0577
Cp4.1LG01g05210Wax gourdcpewgoB0532
Cp4.1LG01g05210Wax gourdcpewgoB0543
Cp4.1LG01g05210Wax gourdcpewgoB0554
Cp4.1LG01g05210Watermelon (Charleston Gray)cpewcgB363